ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1557:A1555

Extra

PDB:
ATOM 1 O3' A A1556 39.307 -63.848 -10.437 1.00 35.65 O
ATOM 2 P C A1557 40.148 -62.486 -10.397 1.00 37.19 P
ATOM 3 OP1 C A1557 39.311 -61.420 -9.768 1.00 27.67 O
ATOM 4 OP2 C A1557 40.660 -62.274 -11.771 1.00 42.72 O
ATOM 5 O5' C A1557 41.340 -62.854 -9.423 1.00 49.23 O
ATOM 6 C5' C A1557 42.586 -63.310 -9.933 1.00 37.41 C
ATOM 7 C4' C A1557 43.742 -62.614 -9.268 1.00 31.71 C
ATOM 8 O4' C A1557 44.806 -62.510 -10.232 1.00 32.55 O
ATOM 9 C3' C A1557 43.458 -61.187 -8.810 1.00 29.25 C
ATOM 10 O3' C A1557 44.341 -60.831 -7.746 1.00 25.77 O
ATOM 11 C2' C A1557 43.845 -60.393 -10.037 1.00 31.94 C
ATOM 12 O2' C A1557 44.127 -59.035 -9.784 1.00 35.81 O
ATOM 13 C1' C A1557 45.086 -61.151 -10.472 1.00 36.52 C
ATOM 14 N1 C A1557 45.424 -60.993 -11.882 1.00 32.15 N
ATOM 15 C2 C A1557 46.433 -60.106 -12.160 1.00 35.33 C
ATOM 16 O2 C A1557 46.930 -59.529 -11.193 1.00 38.75 O
ATOM 17 N3 C A1557 46.812 -59.907 -13.426 1.00 35.52 N
ATOM 18 C4 C A1557 46.196 -60.586 -14.374 1.00 31.72 C
ATOM 19 N4 C A1557 46.593 -60.393 -15.625 1.00 30.72 N
ATOM 20 C5 C A1557 45.159 -61.515 -14.108 1.00 32.95 C
ATOM 21 C6 C A1557 44.801 -61.702 -12.846 1.00 29.85 C
ATOM 22 P A A1558 43.896 -60.922 -6.199 1.00 27.81 P
ATOM 23 OP1 A A1558 44.888 -61.785 -5.524 1.00 44.51 O
ATOM 24 OP2 A A1558 42.481 -61.332 -6.167 1.00 31.50 O
ATOM 25 O5' A A1558 44.066 -59.419 -5.661 1.00 23.32 O
TER

ATOM 1 O3' A B1554 45.464 -63.198 -19.411 1.00 32.04 O
ATOM 2 P C B1555 44.380 -62.928 -18.248 1.00 28.61 P
ATOM 3 OP1 C B1555 43.045 -63.156 -18.847 1.00 43.41 O
ATOM 4 OP2 C B1555 44.671 -61.599 -17.686 1.00 33.19 O
ATOM 5 O5' C B1555 44.690 -64.058 -17.180 1.00 21.07 O
ATOM 6 C5' C B1555 44.464 -65.422 -17.488 1.00 25.19 C
ATOM 7 C4' C B1555 44.217 -66.249 -16.253 1.00 30.18 C
ATOM 8 O4' C B1555 45.413 -66.276 -15.445 1.00 28.18 O
ATOM 9 C3' C B1555 43.095 -65.763 -15.347 1.00 28.15 C
ATOM 10 O3' C B1555 42.408 -66.885 -14.805 1.00 33.68 O
ATOM 11 C2' C B1555 43.831 -65.050 -14.230 1.00 30.60 C
ATOM 12 O2' C B1555 43.153 -65.057 -12.993 1.00 43.39 O
ATOM 13 C1' C B1555 45.118 -65.843 -14.136 1.00 29.21 C
ATOM 14 N1 C B1555 46.232 -65.028 -13.627 1.00 35.50 N
ATOM 15 C2 C B1555 46.535 -65.085 -12.264 1.00 38.78 C
ATOM 16 O2 C B1555 45.927 -65.881 -11.536 1.00 41.65 O
ATOM 17 N3 C B1555 47.500 -64.294 -11.781 1.00 34.26 N
ATOM 18 C4 C B1555 48.112 -63.447 -12.583 1.00 30.19 C
ATOM 19 N4 C B1555 49.048 -62.667 -12.076 1.00 37.19 N
ATOM 20 C5 C B1555 47.814 -63.347 -13.954 1.00 36.43 C
ATOM 21 C6 C B1555 46.861 -64.138 -14.436 1.00 36.21 C
ATOM 22 P A B1556 40.868 -67.150 -15.183 1.00 22.99 P
ATOM 23 OP1 A B1556 40.685 -68.625 -15.269 1.00 31.01 O
ATOM 24 OP2 A B1556 40.581 -66.333 -16.388 1.00 29.55 O
ATOM 25 O5' A B1556 40.070 -66.563 -13.917 1.00 28.16 O
TER

Atoms:
C2: (46.433,-60.106,-12.160)
OP1: (39.311,-61.420,-9.768)
OP2: (40.660,-62.274,-11.771)
C4: (46.196,-60.586,-14.374)
O5': (41.340,-62.854,-9.423)
C3': (43.458,-61.187,-8.810)
C1': (45.086,-61.151,-10.472)
O4': (44.806,-62.510,-10.232)
C5': (42.586,-63.310,-9.933)
P: (40.148,-62.486,-10.397)
O2: (46.930,-59.529,-11.193)
C4': (43.742,-62.614,-9.268)
C2': (43.845,-60.393,-10.037)
O2': (44.127,-59.035,-9.784)
N1: (45.424,-60.993,-11.882)
N3: (46.812,-59.907,-13.426)
N4: (46.593,-60.393,-15.625)
C6: (44.801,-61.702,-12.846)
C5: (45.159,-61.515,-14.108)
O3': (44.341,-60.831,-7.746)
C2: (46.535,-65.085,-12.264)
OP1: (43.045,-63.156,-18.847)
OP2: (44.671,-61.599,-17.686)
C4: (48.112,-63.447,-12.583)
O5': (44.690,-64.058,-17.180)
C3': (43.095,-65.763,-15.347)
C1': (45.118,-65.843,-14.136)
O4': (45.413,-66.276,-15.445)
C5': (44.464,-65.422,-17.488)
P: (44.380,-62.928,-18.248)
O2: (45.927,-65.881,-11.536)
C4': (44.217,-66.249,-16.253)
C2': (43.831,-65.050,-14.230)
O2': (43.153,-65.057,-12.993)
N1: (46.232,-65.028,-13.627)
N3: (47.500,-64.294,-11.781)
N4: (49.048,-62.667,-12.076)
C6: (46.861,-64.138,-14.436)
C5: (47.814,-63.347,-13.954)
O3': (42.408,-66.885,-14.805)
Image (generated by PyMOL):
PyMOL image
show in jmol