Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A39:A10
Extra
PDB:
ATOM 1 O3' C A 38 11.176 -18.948 -22.885 1.00 57.72 O
ATOM 2 P C A 39 9.927 -19.120 -23.883 1.00 57.30 P
ATOM 3 OP1 C A 39 9.435 -20.512 -23.738 1.00 51.84 O
ATOM 4 OP2 C A 39 10.370 -18.657 -25.221 1.00 61.19 O
ATOM 5 O5' C A 39 8.858 -18.102 -23.284 1.00 56.71 O
ATOM 6 C5' C A 39 7.469 -18.286 -23.511 1.00 56.37 C
ATOM 7 C4' C A 39 6.670 -18.084 -22.246 1.00 56.51 C
ATOM 8 O4' C A 39 7.524 -18.272 -21.088 1.00 57.13 O
ATOM 9 C3' C A 39 6.073 -16.700 -22.040 1.00 56.76 C
ATOM 10 O3' C A 39 4.875 -16.502 -22.770 1.00 51.87 O
ATOM 11 C2' C A 39 5.882 -16.645 -20.528 1.00 55.61 C
ATOM 12 O2' C A 39 4.714 -17.353 -20.143 1.00 63.30 O
ATOM 13 C1' C A 39 7.101 -17.426 -20.037 1.00 58.38 C
ATOM 14 N1 C A 39 8.218 -16.532 -19.667 1.00 60.94 N
ATOM 15 C2 C A 39 8.156 -15.878 -18.433 1.00 55.98 C
ATOM 16 O2 C A 39 7.171 -16.075 -17.704 1.00 58.65 O
ATOM 17 N3 C A 39 9.164 -15.051 -18.070 1.00 52.44 N
ATOM 18 C4 C A 39 10.201 -14.870 -18.887 1.00 56.16 C
ATOM 19 N4 C A 39 11.173 -14.047 -18.491 1.00 57.89 N
ATOM 20 C5 C A 39 10.288 -15.525 -20.149 1.00 56.22 C
ATOM 21 C6 C A 39 9.285 -16.340 -20.498 1.00 58.01 C
ATOM 22 P G A 40 4.305 -15.018 -22.999 1.00 57.54 P
ATOM 23 OP1 G A 40 3.097 -15.139 -23.853 1.00 60.44 O
ATOM 24 OP2 G A 40 5.434 -14.186 -23.477 1.00 53.80 O
ATOM 25 O5' G A 40 3.886 -14.569 -21.531 1.00 61.21 O
TER
ATOM 1 O3' A B 9 14.291 -16.037 -19.412 1.00 50.64 O
ATOM 2 P C B 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 3 OP1 C B 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 4 OP2 C B 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 5 O5' C B 10 15.772 -14.419 -20.618 1.00 50.27 O
ATOM 6 C5' C B 10 16.589 -13.393 -20.072 1.00 49.90 C
ATOM 7 C4' C B 10 18.056 -13.666 -20.301 1.00 46.95 C
ATOM 8 O4' C B 10 18.415 -14.952 -19.729 1.00 49.41 O
ATOM 9 C3' C B 10 18.502 -13.779 -21.750 1.00 47.24 C
ATOM 10 O3' C B 10 18.680 -12.522 -22.379 1.00 51.53 O
ATOM 11 C2' C B 10 19.783 -14.591 -21.633 1.00 44.60 C
ATOM 12 O2' C B 10 20.852 -13.779 -21.170 1.00 46.45 O
ATOM 13 C1' C B 10 19.409 -15.569 -20.524 1.00 47.86 C
ATOM 14 N1 C B 10 18.867 -16.831 -21.065 1.00 44.56 N
ATOM 15 C2 C B 10 19.770 -17.800 -21.505 1.00 44.04 C
ATOM 16 O2 C B 10 20.985 -17.564 -21.426 1.00 46.20 O
ATOM 17 N3 C B 10 19.295 -18.961 -22.004 1.00 43.08 N
ATOM 18 C4 C B 10 17.980 -19.168 -22.070 1.00 42.77 C
ATOM 19 N4 C B 10 17.563 -20.333 -22.571 1.00 43.71 N
ATOM 20 C5 C B 10 17.036 -18.196 -21.627 1.00 43.95 C
ATOM 21 C6 C B 10 17.520 -17.049 -21.136 1.00 44.02 C
ATOM 22 P U B 11 18.557 -12.398 -23.977 1.00 50.86 P
ATOM 23 OP1 U B 11 18.785 -10.973 -24.327 1.00 42.77 O
ATOM 24 OP2 U B 11 17.274 -13.028 -24.364 1.00 44.44 O
ATOM 25 O5' U B 11 19.773 -13.284 -24.496 1.00 43.03 O
TER
ATOM 2 P C A 39 9.927 -19.120 -23.883 1.00 57.30 P
ATOM 3 OP1 C A 39 9.435 -20.512 -23.738 1.00 51.84 O
ATOM 4 OP2 C A 39 10.370 -18.657 -25.221 1.00 61.19 O
ATOM 5 O5' C A 39 8.858 -18.102 -23.284 1.00 56.71 O
ATOM 6 C5' C A 39 7.469 -18.286 -23.511 1.00 56.37 C
ATOM 7 C4' C A 39 6.670 -18.084 -22.246 1.00 56.51 C
ATOM 8 O4' C A 39 7.524 -18.272 -21.088 1.00 57.13 O
ATOM 9 C3' C A 39 6.073 -16.700 -22.040 1.00 56.76 C
ATOM 10 O3' C A 39 4.875 -16.502 -22.770 1.00 51.87 O
ATOM 11 C2' C A 39 5.882 -16.645 -20.528 1.00 55.61 C
ATOM 12 O2' C A 39 4.714 -17.353 -20.143 1.00 63.30 O
ATOM 13 C1' C A 39 7.101 -17.426 -20.037 1.00 58.38 C
ATOM 14 N1 C A 39 8.218 -16.532 -19.667 1.00 60.94 N
ATOM 15 C2 C A 39 8.156 -15.878 -18.433 1.00 55.98 C
ATOM 16 O2 C A 39 7.171 -16.075 -17.704 1.00 58.65 O
ATOM 17 N3 C A 39 9.164 -15.051 -18.070 1.00 52.44 N
ATOM 18 C4 C A 39 10.201 -14.870 -18.887 1.00 56.16 C
ATOM 19 N4 C A 39 11.173 -14.047 -18.491 1.00 57.89 N
ATOM 20 C5 C A 39 10.288 -15.525 -20.149 1.00 56.22 C
ATOM 21 C6 C A 39 9.285 -16.340 -20.498 1.00 58.01 C
ATOM 22 P G A 40 4.305 -15.018 -22.999 1.00 57.54 P
ATOM 23 OP1 G A 40 3.097 -15.139 -23.853 1.00 60.44 O
ATOM 24 OP2 G A 40 5.434 -14.186 -23.477 1.00 53.80 O
ATOM 25 O5' G A 40 3.886 -14.569 -21.531 1.00 61.21 O
TER
ATOM 1 O3' A B 9 14.291 -16.037 -19.412 1.00 50.64 O
ATOM 2 P C B 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 3 OP1 C B 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 4 OP2 C B 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 5 O5' C B 10 15.772 -14.419 -20.618 1.00 50.27 O
ATOM 6 C5' C B 10 16.589 -13.393 -20.072 1.00 49.90 C
ATOM 7 C4' C B 10 18.056 -13.666 -20.301 1.00 46.95 C
ATOM 8 O4' C B 10 18.415 -14.952 -19.729 1.00 49.41 O
ATOM 9 C3' C B 10 18.502 -13.779 -21.750 1.00 47.24 C
ATOM 10 O3' C B 10 18.680 -12.522 -22.379 1.00 51.53 O
ATOM 11 C2' C B 10 19.783 -14.591 -21.633 1.00 44.60 C
ATOM 12 O2' C B 10 20.852 -13.779 -21.170 1.00 46.45 O
ATOM 13 C1' C B 10 19.409 -15.569 -20.524 1.00 47.86 C
ATOM 14 N1 C B 10 18.867 -16.831 -21.065 1.00 44.56 N
ATOM 15 C2 C B 10 19.770 -17.800 -21.505 1.00 44.04 C
ATOM 16 O2 C B 10 20.985 -17.564 -21.426 1.00 46.20 O
ATOM 17 N3 C B 10 19.295 -18.961 -22.004 1.00 43.08 N
ATOM 18 C4 C B 10 17.980 -19.168 -22.070 1.00 42.77 C
ATOM 19 N4 C B 10 17.563 -20.333 -22.571 1.00 43.71 N
ATOM 20 C5 C B 10 17.036 -18.196 -21.627 1.00 43.95 C
ATOM 21 C6 C B 10 17.520 -17.049 -21.136 1.00 44.02 C
ATOM 22 P U B 11 18.557 -12.398 -23.977 1.00 50.86 P
ATOM 23 OP1 U B 11 18.785 -10.973 -24.327 1.00 42.77 O
ATOM 24 OP2 U B 11 17.274 -13.028 -24.364 1.00 44.44 O
ATOM 25 O5' U B 11 19.773 -13.284 -24.496 1.00 43.03 O
TER
Atoms:
C2: (8.156,-15.878,-18.433)
OP1: (9.435,-20.512,-23.738)
OP2: (10.370,-18.657,-25.221)
C4: (10.201,-14.870,-18.887)
O5': (8.858,-18.102,-23.284)
C3': (6.073,-16.700,-22.040)
C1': (7.101,-17.426,-20.037)
O4': (7.524,-18.272,-21.088)
C5': (7.469,-18.286,-23.511)
P: (9.927,-19.120,-23.883)
O2: (7.171,-16.075,-17.704)
C4': (6.670,-18.084,-22.246)
C2': (5.882,-16.645,-20.528)
O2': (4.714,-17.353,-20.143)
N1: (8.218,-16.532,-19.667)
N3: (9.164,-15.051,-18.070)
N4: (11.173,-14.047,-18.491)
C6: (9.285,-16.340,-20.498)
C5: (10.288,-15.525,-20.149)
O3': (4.875,-16.502,-22.770)
OP1: (9.435,-20.512,-23.738)
OP2: (10.370,-18.657,-25.221)
C4: (10.201,-14.870,-18.887)
O5': (8.858,-18.102,-23.284)
C3': (6.073,-16.700,-22.040)
C1': (7.101,-17.426,-20.037)
O4': (7.524,-18.272,-21.088)
C5': (7.469,-18.286,-23.511)
P: (9.927,-19.120,-23.883)
O2: (7.171,-16.075,-17.704)
C4': (6.670,-18.084,-22.246)
C2': (5.882,-16.645,-20.528)
O2': (4.714,-17.353,-20.143)
N1: (8.218,-16.532,-19.667)
N3: (9.164,-15.051,-18.070)
N4: (11.173,-14.047,-18.491)
C6: (9.285,-16.340,-20.498)
C5: (10.288,-15.525,-20.149)
O3': (4.875,-16.502,-22.770)
C2: (19.770,-17.800,-21.505)
OP1: (13.931,-13.592,-19.109)
OP2: (13.373,-14.733,-21.323)
C4: (17.980,-19.168,-22.070)
O5': (15.772,-14.419,-20.618)
C3': (18.502,-13.779,-21.750)
C1': (19.409,-15.569,-20.524)
O4': (18.415,-14.952,-19.729)
C5': (16.589,-13.393,-20.072)
P: (14.262,-14.604,-20.142)
O2: (20.985,-17.564,-21.426)
C4': (18.056,-13.666,-20.301)
C2': (19.783,-14.591,-21.633)
O2': (20.852,-13.779,-21.170)
N1: (18.867,-16.831,-21.065)
N3: (19.295,-18.961,-22.004)
N4: (17.563,-20.333,-22.571)
C6: (17.520,-17.049,-21.136)
C5: (17.036,-18.196,-21.627)
O3': (18.680,-12.522,-22.379)
OP1: (13.931,-13.592,-19.109)
OP2: (13.373,-14.733,-21.323)
C4: (17.980,-19.168,-22.070)
O5': (15.772,-14.419,-20.618)
C3': (18.502,-13.779,-21.750)
C1': (19.409,-15.569,-20.524)
O4': (18.415,-14.952,-19.729)
C5': (16.589,-13.393,-20.072)
P: (14.262,-14.604,-20.142)
O2: (20.985,-17.564,-21.426)
C4': (18.056,-13.666,-20.301)
C2': (19.783,-14.591,-21.633)
O2': (20.852,-13.779,-21.170)
N1: (18.867,-16.831,-21.065)
N3: (19.295,-18.961,-22.004)
N4: (17.563,-20.333,-22.571)
C6: (17.520,-17.049,-21.136)
C5: (17.036,-18.196,-21.627)
O3': (18.680,-12.522,-22.379)
Image (generated by PyMOL):