Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D39:D10
Extra
PDB:
ATOM 1 O3' C A 38 22.181 -0.141 -69.730 1.00 55.84 O
ATOM 2 P C A 39 21.645 1.080 -68.831 1.00 52.42 P
ATOM 3 OP1 C A 39 22.622 2.187 -68.964 1.00 49.91 O
ATOM 4 OP2 C A 39 21.363 0.536 -67.479 1.00 52.44 O
ATOM 5 O5' C A 39 20.281 1.468 -69.554 1.00 60.94 O
ATOM 6 C5' C A 39 19.658 2.721 -69.315 1.00 65.16 C
ATOM 7 C4' C A 39 19.138 3.330 -70.593 1.00 67.75 C
ATOM 8 O4' C A 39 19.748 2.672 -71.735 1.00 59.86 O
ATOM 9 C3' C A 39 17.645 3.189 -70.847 1.00 64.14 C
ATOM 10 O3' C A 39 16.869 4.138 -70.138 1.00 68.50 O
ATOM 11 C2' C A 39 17.554 3.337 -72.360 1.00 64.66 C
ATOM 12 O2' C A 39 17.648 4.702 -72.738 1.00 69.52 O
ATOM 13 C1' C A 39 18.829 2.625 -72.808 1.00 60.03 C
ATOM 14 N1 C A 39 18.578 1.212 -73.158 1.00 58.73 N
ATOM 15 C2 C A 39 17.893 0.953 -74.347 1.00 51.93 C
ATOM 16 O2 C A 39 17.536 1.915 -75.043 1.00 53.44 O
ATOM 17 N3 C A 39 17.639 -0.326 -74.703 1.00 49.87 N
ATOM 18 C4 C A 39 18.044 -1.325 -73.919 1.00 52.94 C
ATOM 19 N4 C A 39 17.772 -2.572 -74.310 1.00 54.68 N
ATOM 20 C5 C A 39 18.745 -1.090 -72.700 1.00 55.54 C
ATOM 21 C6 C A 39 18.987 0.183 -72.358 1.00 57.87 C
ATOM 22 P G A 40 15.323 3.838 -69.817 1.00 85.10 P
ATOM 23 OP1 G A 40 14.826 4.957 -68.981 1.00 81.06 O
ATOM 24 OP2 G A 40 15.250 2.459 -69.278 1.00 73.62 O
ATOM 25 O5' G A 40 14.643 3.894 -71.257 1.00 75.24 O
TER
ATOM 1 O3' A B 9 20.923 -4.757 -73.305 1.00 51.51 O
ATOM 2 P C B 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 3 OP1 C B 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 4 OP2 C B 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 5 O5' C B 10 20.309 -6.878 -72.125 1.00 47.42 O
ATOM 6 C5' C B 10 20.118 -8.087 -72.847 1.00 48.13 C
ATOM 7 C4' C B 10 21.165 -9.118 -72.504 1.00 47.08 C
ATOM 8 O4' C B 10 22.465 -8.688 -72.987 1.00 49.44 O
ATOM 9 C3' C B 10 21.398 -9.373 -71.024 1.00 46.39 C
ATOM 10 O3' C B 10 20.419 -10.213 -70.439 1.00 53.05 O
ATOM 11 C2' C B 10 22.799 -9.964 -71.013 1.00 43.45 C
ATOM 12 O2' C B 10 22.775 -11.322 -71.428 1.00 40.30 O
ATOM 13 C1' C B 10 23.475 -9.142 -72.107 1.00 42.81 C
ATOM 14 N1 C B 10 24.187 -7.973 -71.554 1.00 40.24 N
ATOM 15 C2 C B 10 25.489 -8.175 -71.098 1.00 41.60 C
ATOM 16 O2 C B 10 25.975 -9.312 -71.181 1.00 43.40 O
ATOM 17 N3 C B 10 26.178 -7.135 -70.581 1.00 38.49 N
ATOM 18 C4 C B 10 25.609 -5.932 -70.514 1.00 35.99 C
ATOM 19 N4 C B 10 26.336 -4.938 -69.996 1.00 36.86 N
ATOM 20 C5 C B 10 24.278 -5.696 -70.973 1.00 35.59 C
ATOM 21 C6 C B 10 23.608 -6.738 -71.480 1.00 39.08 C
ATOM 22 P U B 11 20.117 -10.115 -68.863 1.00 52.15 P
ATOM 23 OP1 U B 11 18.991 -11.033 -68.574 1.00 47.28 O
ATOM 24 OP2 U B 11 19.966 -8.676 -68.538 1.00 52.70 O
ATOM 25 O5' U B 11 21.454 -10.678 -68.211 1.00 39.76 O
TER
ATOM 2 P C A 39 21.645 1.080 -68.831 1.00 52.42 P
ATOM 3 OP1 C A 39 22.622 2.187 -68.964 1.00 49.91 O
ATOM 4 OP2 C A 39 21.363 0.536 -67.479 1.00 52.44 O
ATOM 5 O5' C A 39 20.281 1.468 -69.554 1.00 60.94 O
ATOM 6 C5' C A 39 19.658 2.721 -69.315 1.00 65.16 C
ATOM 7 C4' C A 39 19.138 3.330 -70.593 1.00 67.75 C
ATOM 8 O4' C A 39 19.748 2.672 -71.735 1.00 59.86 O
ATOM 9 C3' C A 39 17.645 3.189 -70.847 1.00 64.14 C
ATOM 10 O3' C A 39 16.869 4.138 -70.138 1.00 68.50 O
ATOM 11 C2' C A 39 17.554 3.337 -72.360 1.00 64.66 C
ATOM 12 O2' C A 39 17.648 4.702 -72.738 1.00 69.52 O
ATOM 13 C1' C A 39 18.829 2.625 -72.808 1.00 60.03 C
ATOM 14 N1 C A 39 18.578 1.212 -73.158 1.00 58.73 N
ATOM 15 C2 C A 39 17.893 0.953 -74.347 1.00 51.93 C
ATOM 16 O2 C A 39 17.536 1.915 -75.043 1.00 53.44 O
ATOM 17 N3 C A 39 17.639 -0.326 -74.703 1.00 49.87 N
ATOM 18 C4 C A 39 18.044 -1.325 -73.919 1.00 52.94 C
ATOM 19 N4 C A 39 17.772 -2.572 -74.310 1.00 54.68 N
ATOM 20 C5 C A 39 18.745 -1.090 -72.700 1.00 55.54 C
ATOM 21 C6 C A 39 18.987 0.183 -72.358 1.00 57.87 C
ATOM 22 P G A 40 15.323 3.838 -69.817 1.00 85.10 P
ATOM 23 OP1 G A 40 14.826 4.957 -68.981 1.00 81.06 O
ATOM 24 OP2 G A 40 15.250 2.459 -69.278 1.00 73.62 O
ATOM 25 O5' G A 40 14.643 3.894 -71.257 1.00 75.24 O
TER
ATOM 1 O3' A B 9 20.923 -4.757 -73.305 1.00 51.51 O
ATOM 2 P C B 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 3 OP1 C B 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 4 OP2 C B 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 5 O5' C B 10 20.309 -6.878 -72.125 1.00 47.42 O
ATOM 6 C5' C B 10 20.118 -8.087 -72.847 1.00 48.13 C
ATOM 7 C4' C B 10 21.165 -9.118 -72.504 1.00 47.08 C
ATOM 8 O4' C B 10 22.465 -8.688 -72.987 1.00 49.44 O
ATOM 9 C3' C B 10 21.398 -9.373 -71.024 1.00 46.39 C
ATOM 10 O3' C B 10 20.419 -10.213 -70.439 1.00 53.05 O
ATOM 11 C2' C B 10 22.799 -9.964 -71.013 1.00 43.45 C
ATOM 12 O2' C B 10 22.775 -11.322 -71.428 1.00 40.30 O
ATOM 13 C1' C B 10 23.475 -9.142 -72.107 1.00 42.81 C
ATOM 14 N1 C B 10 24.187 -7.973 -71.554 1.00 40.24 N
ATOM 15 C2 C B 10 25.489 -8.175 -71.098 1.00 41.60 C
ATOM 16 O2 C B 10 25.975 -9.312 -71.181 1.00 43.40 O
ATOM 17 N3 C B 10 26.178 -7.135 -70.581 1.00 38.49 N
ATOM 18 C4 C B 10 25.609 -5.932 -70.514 1.00 35.99 C
ATOM 19 N4 C B 10 26.336 -4.938 -69.996 1.00 36.86 N
ATOM 20 C5 C B 10 24.278 -5.696 -70.973 1.00 35.59 C
ATOM 21 C6 C B 10 23.608 -6.738 -71.480 1.00 39.08 C
ATOM 22 P U B 11 20.117 -10.115 -68.863 1.00 52.15 P
ATOM 23 OP1 U B 11 18.991 -11.033 -68.574 1.00 47.28 O
ATOM 24 OP2 U B 11 19.966 -8.676 -68.538 1.00 52.70 O
ATOM 25 O5' U B 11 21.454 -10.678 -68.211 1.00 39.76 O
TER
Atoms:
C2: (17.893,0.953,-74.347)
OP1: (22.622,2.187,-68.964)
OP2: (21.363,0.536,-67.479)
C4: (18.044,-1.325,-73.919)
O5': (20.281,1.468,-69.554)
C3': (17.645,3.189,-70.847)
C1': (18.829,2.625,-72.808)
O4': (19.748,2.672,-71.735)
C5': (19.658,2.721,-69.315)
P: (21.645,1.080,-68.831)
O2: (17.536,1.915,-75.043)
C4': (19.138,3.330,-70.593)
C2': (17.554,3.337,-72.360)
O2': (17.648,4.702,-72.738)
N1: (18.578,1.212,-73.158)
N3: (17.639,-0.326,-74.703)
N4: (17.772,-2.572,-74.310)
C6: (18.987,0.183,-72.358)
C5: (18.745,-1.090,-72.700)
O3': (16.869,4.138,-70.138)
OP1: (22.622,2.187,-68.964)
OP2: (21.363,0.536,-67.479)
C4: (18.044,-1.325,-73.919)
O5': (20.281,1.468,-69.554)
C3': (17.645,3.189,-70.847)
C1': (18.829,2.625,-72.808)
O4': (19.748,2.672,-71.735)
C5': (19.658,2.721,-69.315)
P: (21.645,1.080,-68.831)
O2: (17.536,1.915,-75.043)
C4': (19.138,3.330,-70.593)
C2': (17.554,3.337,-72.360)
O2': (17.648,4.702,-72.738)
N1: (18.578,1.212,-73.158)
N3: (17.639,-0.326,-74.703)
N4: (17.772,-2.572,-74.310)
C6: (18.987,0.183,-72.358)
C5: (18.745,-1.090,-72.700)
O3': (16.869,4.138,-70.138)
C2: (25.489,-8.175,-71.098)
OP1: (18.693,-5.780,-73.722)
OP2: (19.237,-4.689,-71.480)
C4: (25.609,-5.932,-70.514)
O5': (20.309,-6.878,-72.125)
C3': (21.398,-9.373,-71.024)
C1': (23.475,-9.142,-72.107)
O4': (22.465,-8.688,-72.987)
C5': (20.118,-8.087,-72.847)
P: (19.669,-5.509,-72.637)
O2: (25.975,-9.312,-71.181)
C4': (21.165,-9.118,-72.504)
C2': (22.799,-9.964,-71.013)
O2': (22.775,-11.322,-71.428)
N1: (24.187,-7.973,-71.554)
N3: (26.178,-7.135,-70.581)
N4: (26.336,-4.938,-69.996)
C6: (23.608,-6.738,-71.480)
C5: (24.278,-5.696,-70.973)
O3': (20.419,-10.213,-70.439)
OP1: (18.693,-5.780,-73.722)
OP2: (19.237,-4.689,-71.480)
C4: (25.609,-5.932,-70.514)
O5': (20.309,-6.878,-72.125)
C3': (21.398,-9.373,-71.024)
C1': (23.475,-9.142,-72.107)
O4': (22.465,-8.688,-72.987)
C5': (20.118,-8.087,-72.847)
P: (19.669,-5.509,-72.637)
O2: (25.975,-9.312,-71.181)
C4': (21.165,-9.118,-72.504)
C2': (22.799,-9.964,-71.013)
O2': (22.775,-11.322,-71.428)
N1: (24.187,-7.973,-71.554)
N3: (26.178,-7.135,-70.581)
N4: (26.336,-4.938,-69.996)
C6: (23.608,-6.738,-71.480)
C5: (24.278,-5.696,-70.973)
O3': (20.419,-10.213,-70.439)
Image (generated by PyMOL):