Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0547:0586
Extra
PDB:
ATOM 1 O3' C A 546 -9.098 116.660 102.749 1.00 74.19 O
ATOM 2 P U A 547 -9.431 115.102 103.000 1.00 75.65 P
ATOM 3 OP1 U A 547 -8.567 114.638 104.115 1.00 75.11 O
ATOM 4 OP2 U A 547 -9.398 114.384 101.698 1.00 73.99 O
ATOM 5 O5' U A 547 -10.943 115.111 103.504 1.00 76.59 O
ATOM 6 C5' U A 547 -11.939 115.831 102.770 1.00 77.66 C
ATOM 7 C4' U A 547 -13.324 115.541 103.290 1.00 78.85 C
ATOM 8 O4' U A 547 -14.261 116.288 102.462 1.00 79.82 O
ATOM 9 C3' U A 547 -13.767 114.084 103.202 1.00 78.91 C
ATOM 10 O3' U A 547 -13.519 113.366 104.411 1.00 76.89 O
ATOM 11 C2' U A 547 -15.245 114.200 102.851 1.00 79.46 C
ATOM 12 O2' U A 547 -16.046 114.497 103.977 1.00 79.80 O
ATOM 13 C1' U A 547 -15.221 115.406 101.911 1.00 80.28 C
ATOM 14 N1 U A 547 -14.816 115.083 100.530 1.00 80.59 N
ATOM 15 C2 U A 547 -15.812 114.963 99.570 1.00 82.04 C
ATOM 16 O2 U A 547 -16.997 115.139 99.810 1.00 83.47 O
ATOM 17 N3 U A 547 -15.367 114.630 98.313 1.00 82.52 N
ATOM 18 C4 U A 547 -14.058 114.414 97.920 1.00 82.67 C
ATOM 19 O4 U A 547 -13.821 114.043 96.767 1.00 81.51 O
ATOM 20 C5 U A 547 -13.091 114.577 98.960 1.00 82.19 C
ATOM 21 C6 U A 547 -13.490 114.895 100.193 1.00 81.25 C
ATOM 22 P C A 548 -13.247 111.779 104.358 1.00 76.12 P
ATOM 23 OP1 C A 548 -13.402 111.254 105.738 1.00 75.35 O
ATOM 24 OP2 C A 548 -11.973 111.552 103.630 1.00 77.18 O
ATOM 25 O5' C A 548 -14.447 111.205 103.480 1.00 74.00 O
TER
ATOM 1 O3' A B 585 -17.472 110.184 87.386 1.00 66.22 O
ATOM 2 P C B 586 -17.742 111.763 87.489 1.00 68.90 P
ATOM 3 OP1 C B 586 -18.605 112.129 86.336 1.00 68.85 O
ATOM 4 OP2 C B 586 -16.450 112.464 87.687 1.00 69.17 O
ATOM 5 O5' C B 586 -18.581 111.913 88.836 1.00 71.56 O
ATOM 6 C5' C B 586 -19.909 111.358 88.947 1.00 73.76 C
ATOM 7 C4' C B 586 -20.529 111.729 90.275 1.00 75.24 C
ATOM 8 O4' C B 586 -19.845 111.043 91.358 1.00 76.02 O
ATOM 9 C3' C B 586 -20.442 113.196 90.659 1.00 76.42 C
ATOM 10 O3' C B 586 -21.432 113.987 90.015 1.00 76.09 O
ATOM 11 C2' C B 586 -20.619 113.146 92.171 1.00 77.68 C
ATOM 12 O2' C B 586 -21.971 113.034 92.571 1.00 78.53 O
ATOM 13 C1' C B 586 -19.854 111.863 92.518 1.00 77.85 C
ATOM 14 N1 C B 586 -18.462 112.126 92.925 1.00 79.31 N
ATOM 15 C2 C B 586 -18.177 112.294 94.289 1.00 80.98 C
ATOM 16 O2 C B 586 -19.100 112.194 95.117 1.00 83.01 O
ATOM 17 N3 C B 586 -16.908 112.561 94.670 1.00 81.37 N
ATOM 18 C4 C B 586 -15.942 112.658 93.753 1.00 81.25 C
ATOM 19 N4 C B 586 -14.706 112.931 94.177 1.00 80.96 N
ATOM 20 C5 C B 586 -16.201 112.481 92.362 1.00 80.92 C
ATOM 21 C6 C B 586 -17.461 112.218 91.997 1.00 80.23 C
ATOM 22 P G B 587 -21.135 115.536 89.715 1.00 76.21 P
ATOM 23 OP1 G B 587 -22.348 116.106 89.076 1.00 76.90 O
ATOM 24 OP2 G B 587 -19.832 115.619 89.007 1.00 76.29 O
ATOM 25 O5' G B 587 -20.977 116.179 91.166 1.00 74.72 O
TER
ATOM 2 P U A 547 -9.431 115.102 103.000 1.00 75.65 P
ATOM 3 OP1 U A 547 -8.567 114.638 104.115 1.00 75.11 O
ATOM 4 OP2 U A 547 -9.398 114.384 101.698 1.00 73.99 O
ATOM 5 O5' U A 547 -10.943 115.111 103.504 1.00 76.59 O
ATOM 6 C5' U A 547 -11.939 115.831 102.770 1.00 77.66 C
ATOM 7 C4' U A 547 -13.324 115.541 103.290 1.00 78.85 C
ATOM 8 O4' U A 547 -14.261 116.288 102.462 1.00 79.82 O
ATOM 9 C3' U A 547 -13.767 114.084 103.202 1.00 78.91 C
ATOM 10 O3' U A 547 -13.519 113.366 104.411 1.00 76.89 O
ATOM 11 C2' U A 547 -15.245 114.200 102.851 1.00 79.46 C
ATOM 12 O2' U A 547 -16.046 114.497 103.977 1.00 79.80 O
ATOM 13 C1' U A 547 -15.221 115.406 101.911 1.00 80.28 C
ATOM 14 N1 U A 547 -14.816 115.083 100.530 1.00 80.59 N
ATOM 15 C2 U A 547 -15.812 114.963 99.570 1.00 82.04 C
ATOM 16 O2 U A 547 -16.997 115.139 99.810 1.00 83.47 O
ATOM 17 N3 U A 547 -15.367 114.630 98.313 1.00 82.52 N
ATOM 18 C4 U A 547 -14.058 114.414 97.920 1.00 82.67 C
ATOM 19 O4 U A 547 -13.821 114.043 96.767 1.00 81.51 O
ATOM 20 C5 U A 547 -13.091 114.577 98.960 1.00 82.19 C
ATOM 21 C6 U A 547 -13.490 114.895 100.193 1.00 81.25 C
ATOM 22 P C A 548 -13.247 111.779 104.358 1.00 76.12 P
ATOM 23 OP1 C A 548 -13.402 111.254 105.738 1.00 75.35 O
ATOM 24 OP2 C A 548 -11.973 111.552 103.630 1.00 77.18 O
ATOM 25 O5' C A 548 -14.447 111.205 103.480 1.00 74.00 O
TER
ATOM 1 O3' A B 585 -17.472 110.184 87.386 1.00 66.22 O
ATOM 2 P C B 586 -17.742 111.763 87.489 1.00 68.90 P
ATOM 3 OP1 C B 586 -18.605 112.129 86.336 1.00 68.85 O
ATOM 4 OP2 C B 586 -16.450 112.464 87.687 1.00 69.17 O
ATOM 5 O5' C B 586 -18.581 111.913 88.836 1.00 71.56 O
ATOM 6 C5' C B 586 -19.909 111.358 88.947 1.00 73.76 C
ATOM 7 C4' C B 586 -20.529 111.729 90.275 1.00 75.24 C
ATOM 8 O4' C B 586 -19.845 111.043 91.358 1.00 76.02 O
ATOM 9 C3' C B 586 -20.442 113.196 90.659 1.00 76.42 C
ATOM 10 O3' C B 586 -21.432 113.987 90.015 1.00 76.09 O
ATOM 11 C2' C B 586 -20.619 113.146 92.171 1.00 77.68 C
ATOM 12 O2' C B 586 -21.971 113.034 92.571 1.00 78.53 O
ATOM 13 C1' C B 586 -19.854 111.863 92.518 1.00 77.85 C
ATOM 14 N1 C B 586 -18.462 112.126 92.925 1.00 79.31 N
ATOM 15 C2 C B 586 -18.177 112.294 94.289 1.00 80.98 C
ATOM 16 O2 C B 586 -19.100 112.194 95.117 1.00 83.01 O
ATOM 17 N3 C B 586 -16.908 112.561 94.670 1.00 81.37 N
ATOM 18 C4 C B 586 -15.942 112.658 93.753 1.00 81.25 C
ATOM 19 N4 C B 586 -14.706 112.931 94.177 1.00 80.96 N
ATOM 20 C5 C B 586 -16.201 112.481 92.362 1.00 80.92 C
ATOM 21 C6 C B 586 -17.461 112.218 91.997 1.00 80.23 C
ATOM 22 P G B 587 -21.135 115.536 89.715 1.00 76.21 P
ATOM 23 OP1 G B 587 -22.348 116.106 89.076 1.00 76.90 O
ATOM 24 OP2 G B 587 -19.832 115.619 89.007 1.00 76.29 O
ATOM 25 O5' G B 587 -20.977 116.179 91.166 1.00 74.72 O
TER
Atoms:
C4: (-14.058,114.414,97.920)
N3: (-15.367,114.630,98.313)
OP1: (-8.567,114.638,104.115)
OP2: (-9.398,114.384,101.698)
C2: (-15.812,114.963,99.570)
C1': (-15.221,115.406,101.911)
C3': (-13.767,114.084,103.202)
O5': (-10.943,115.111,103.504)
O4': (-14.261,116.288,102.462)
C5': (-11.939,115.831,102.770)
P: (-9.431,115.102,103.000)
C4': (-13.324,115.541,103.290)
C2': (-15.245,114.200,102.851)
O2': (-16.046,114.497,103.977)
N1: (-14.816,115.083,100.530)
O4: (-13.821,114.043,96.767)
O2: (-16.997,115.139,99.810)
C6: (-13.490,114.895,100.193)
C5: (-13.091,114.577,98.960)
O3': (-13.519,113.366,104.411)
N3: (-15.367,114.630,98.313)
OP1: (-8.567,114.638,104.115)
OP2: (-9.398,114.384,101.698)
C2: (-15.812,114.963,99.570)
C1': (-15.221,115.406,101.911)
C3': (-13.767,114.084,103.202)
O5': (-10.943,115.111,103.504)
O4': (-14.261,116.288,102.462)
C5': (-11.939,115.831,102.770)
P: (-9.431,115.102,103.000)
C4': (-13.324,115.541,103.290)
C2': (-15.245,114.200,102.851)
O2': (-16.046,114.497,103.977)
N1: (-14.816,115.083,100.530)
O4: (-13.821,114.043,96.767)
O2: (-16.997,115.139,99.810)
C6: (-13.490,114.895,100.193)
C5: (-13.091,114.577,98.960)
O3': (-13.519,113.366,104.411)
C2: (-18.177,112.294,94.289)
OP1: (-18.605,112.129,86.336)
OP2: (-16.450,112.464,87.687)
C4: (-15.942,112.658,93.753)
O5': (-18.581,111.913,88.836)
C3': (-20.442,113.196,90.659)
C1': (-19.854,111.863,92.518)
O4': (-19.845,111.043,91.358)
C5': (-19.909,111.358,88.947)
P: (-17.742,111.763,87.489)
O2: (-19.100,112.194,95.117)
C4': (-20.529,111.729,90.275)
C2': (-20.619,113.146,92.171)
O2': (-21.971,113.034,92.571)
N1: (-18.462,112.126,92.925)
N3: (-16.908,112.561,94.670)
N4: (-14.706,112.931,94.177)
C6: (-17.461,112.218,91.997)
C5: (-16.201,112.481,92.362)
O3': (-21.432,113.987,90.015)
OP1: (-18.605,112.129,86.336)
OP2: (-16.450,112.464,87.687)
C4: (-15.942,112.658,93.753)
O5': (-18.581,111.913,88.836)
C3': (-20.442,113.196,90.659)
C1': (-19.854,111.863,92.518)
O4': (-19.845,111.043,91.358)
C5': (-19.909,111.358,88.947)
P: (-17.742,111.763,87.489)
O2: (-19.100,112.194,95.117)
C4': (-20.529,111.729,90.275)
C2': (-20.619,113.146,92.171)
O2': (-21.971,113.034,92.571)
N1: (-18.462,112.126,92.925)
N3: (-16.908,112.561,94.670)
N4: (-14.706,112.931,94.177)
C6: (-17.461,112.218,91.997)
C5: (-16.201,112.481,92.362)
O3': (-21.432,113.987,90.015)
Image (generated by PyMOL):