Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A871:A788
Extra
PDB:
ATOM 1 O3' G A 870 -5.374 110.863 105.737 1.00 0.79 O
ATOM 2 P C A 871 -4.822 111.187 107.203 1.00 30.30 P
ATOM 3 OP1 C A 871 -4.437 112.617 107.299 1.00 37.30 O
ATOM 4 OP2 C A 871 -3.827 110.134 107.548 1.00 34.69 O
ATOM 5 O5' C A 871 -6.101 110.986 108.121 1.00 8.15 O
ATOM 6 C5' C A 871 -5.987 111.080 109.541 1.00 8.15 C
ATOM 7 C4' C A 871 -7.040 112.006 110.077 1.00 8.15 C
ATOM 8 O4' C A 871 -6.829 113.338 109.562 1.00 8.15 O
ATOM 9 C3' C A 871 -8.447 111.642 109.661 1.00 8.15 C
ATOM 10 O3' C A 871 -8.952 110.705 110.582 1.00 8.15 O
ATOM 11 C2' C A 871 -9.182 112.980 109.713 1.00 8.15 C
ATOM 12 O2' C A 871 -9.622 113.304 111.020 1.00 9.12 O
ATOM 13 C1' C A 871 -8.074 113.951 109.299 1.00 8.15 C
ATOM 14 N1 C A 871 -8.079 114.355 107.887 1.00 2.06 N
ATOM 15 C2 C A 871 -8.983 115.324 107.468 1.00 2.06 C
ATOM 16 O2 C A 871 -9.821 115.756 108.277 1.00 2.06 O
ATOM 17 N3 C A 871 -8.935 115.763 106.186 1.00 2.06 N
ATOM 18 C4 C A 871 -8.042 115.252 105.340 1.00 2.06 C
ATOM 19 N4 C A 871 -8.006 115.738 104.112 1.00 2.06 N
ATOM 20 C5 C A 871 -7.141 114.226 105.728 1.00 2.06 C
ATOM 21 C6 C A 871 -7.193 113.810 107.000 1.00 2.06 C
ATOM 22 P A A 872 -9.933 109.572 110.073 1.00 7.65 P
ATOM 23 OP1 A A 872 -10.346 108.794 111.271 1.00 12.61 O
ATOM 24 OP2 A A 872 -9.248 108.891 108.950 1.00 12.66 O
ATOM 25 O5' A A 872 -11.202 110.376 109.570 1.00 0.91 O
TER
ATOM 1 O3' G B 787 0.796 117.137 100.565 1.00 25.05 O
ATOM 2 P C B 788 0.262 115.727 99.977 1.00 11.45 P
ATOM 3 OP1 C B 788 1.282 114.718 100.362 1.00 24.38 O
ATOM 4 OP2 C B 788 -0.106 115.896 98.538 1.00 22.81 O
ATOM 5 O5' C B 788 -1.067 115.457 100.818 1.00 0.79 O
ATOM 6 C5' C B 788 -2.121 114.644 100.287 1.00 0.79 C
ATOM 7 C4' C B 788 -3.317 114.638 101.216 1.00 0.79 C
ATOM 8 O4' C B 788 -3.929 115.948 101.227 1.00 0.79 O
ATOM 9 C3' C B 788 -4.446 113.724 100.773 1.00 0.79 C
ATOM 10 O3' C B 788 -4.216 112.389 101.181 1.00 0.79 O
ATOM 11 C2' C B 788 -5.673 114.345 101.418 1.00 0.79 C
ATOM 12 O2' C B 788 -5.794 114.027 102.789 1.00 0.79 O
ATOM 13 C1' C B 788 -5.335 115.824 101.331 1.00 0.79 C
ATOM 14 N1 C B 788 -5.971 116.498 100.194 1.00 0.79 N
ATOM 15 C2 C B 788 -7.351 116.586 100.177 1.00 0.79 C
ATOM 16 O2 C B 788 -7.981 116.106 101.118 1.00 0.79 O
ATOM 17 N3 C B 788 -7.971 117.193 99.147 1.00 0.79 N
ATOM 18 C4 C B 788 -7.254 117.718 98.170 1.00 0.79 C
ATOM 19 N4 C B 788 -7.905 118.323 97.199 1.00 0.79 N
ATOM 20 C5 C B 788 -5.830 117.651 98.157 1.00 0.79 C
ATOM 21 C6 C B 788 -5.236 117.035 99.178 1.00 0.79 C
ATOM 22 P C B 789 -4.548 111.205 100.162 1.00 13.17 P
ATOM 23 OP1 C B 789 -4.263 109.904 100.834 1.00 19.44 O
ATOM 24 OP2 C B 789 -3.853 111.547 98.884 1.00 16.79 O
ATOM 25 O5' C B 789 -6.123 111.329 99.982 1.00 0.79 O
TER
ATOM 2 P C A 871 -4.822 111.187 107.203 1.00 30.30 P
ATOM 3 OP1 C A 871 -4.437 112.617 107.299 1.00 37.30 O
ATOM 4 OP2 C A 871 -3.827 110.134 107.548 1.00 34.69 O
ATOM 5 O5' C A 871 -6.101 110.986 108.121 1.00 8.15 O
ATOM 6 C5' C A 871 -5.987 111.080 109.541 1.00 8.15 C
ATOM 7 C4' C A 871 -7.040 112.006 110.077 1.00 8.15 C
ATOM 8 O4' C A 871 -6.829 113.338 109.562 1.00 8.15 O
ATOM 9 C3' C A 871 -8.447 111.642 109.661 1.00 8.15 C
ATOM 10 O3' C A 871 -8.952 110.705 110.582 1.00 8.15 O
ATOM 11 C2' C A 871 -9.182 112.980 109.713 1.00 8.15 C
ATOM 12 O2' C A 871 -9.622 113.304 111.020 1.00 9.12 O
ATOM 13 C1' C A 871 -8.074 113.951 109.299 1.00 8.15 C
ATOM 14 N1 C A 871 -8.079 114.355 107.887 1.00 2.06 N
ATOM 15 C2 C A 871 -8.983 115.324 107.468 1.00 2.06 C
ATOM 16 O2 C A 871 -9.821 115.756 108.277 1.00 2.06 O
ATOM 17 N3 C A 871 -8.935 115.763 106.186 1.00 2.06 N
ATOM 18 C4 C A 871 -8.042 115.252 105.340 1.00 2.06 C
ATOM 19 N4 C A 871 -8.006 115.738 104.112 1.00 2.06 N
ATOM 20 C5 C A 871 -7.141 114.226 105.728 1.00 2.06 C
ATOM 21 C6 C A 871 -7.193 113.810 107.000 1.00 2.06 C
ATOM 22 P A A 872 -9.933 109.572 110.073 1.00 7.65 P
ATOM 23 OP1 A A 872 -10.346 108.794 111.271 1.00 12.61 O
ATOM 24 OP2 A A 872 -9.248 108.891 108.950 1.00 12.66 O
ATOM 25 O5' A A 872 -11.202 110.376 109.570 1.00 0.91 O
TER
ATOM 1 O3' G B 787 0.796 117.137 100.565 1.00 25.05 O
ATOM 2 P C B 788 0.262 115.727 99.977 1.00 11.45 P
ATOM 3 OP1 C B 788 1.282 114.718 100.362 1.00 24.38 O
ATOM 4 OP2 C B 788 -0.106 115.896 98.538 1.00 22.81 O
ATOM 5 O5' C B 788 -1.067 115.457 100.818 1.00 0.79 O
ATOM 6 C5' C B 788 -2.121 114.644 100.287 1.00 0.79 C
ATOM 7 C4' C B 788 -3.317 114.638 101.216 1.00 0.79 C
ATOM 8 O4' C B 788 -3.929 115.948 101.227 1.00 0.79 O
ATOM 9 C3' C B 788 -4.446 113.724 100.773 1.00 0.79 C
ATOM 10 O3' C B 788 -4.216 112.389 101.181 1.00 0.79 O
ATOM 11 C2' C B 788 -5.673 114.345 101.418 1.00 0.79 C
ATOM 12 O2' C B 788 -5.794 114.027 102.789 1.00 0.79 O
ATOM 13 C1' C B 788 -5.335 115.824 101.331 1.00 0.79 C
ATOM 14 N1 C B 788 -5.971 116.498 100.194 1.00 0.79 N
ATOM 15 C2 C B 788 -7.351 116.586 100.177 1.00 0.79 C
ATOM 16 O2 C B 788 -7.981 116.106 101.118 1.00 0.79 O
ATOM 17 N3 C B 788 -7.971 117.193 99.147 1.00 0.79 N
ATOM 18 C4 C B 788 -7.254 117.718 98.170 1.00 0.79 C
ATOM 19 N4 C B 788 -7.905 118.323 97.199 1.00 0.79 N
ATOM 20 C5 C B 788 -5.830 117.651 98.157 1.00 0.79 C
ATOM 21 C6 C B 788 -5.236 117.035 99.178 1.00 0.79 C
ATOM 22 P C B 789 -4.548 111.205 100.162 1.00 13.17 P
ATOM 23 OP1 C B 789 -4.263 109.904 100.834 1.00 19.44 O
ATOM 24 OP2 C B 789 -3.853 111.547 98.884 1.00 16.79 O
ATOM 25 O5' C B 789 -6.123 111.329 99.982 1.00 0.79 O
TER
Atoms:
C2: (-8.983,115.324,107.468)
OP1: (-4.437,112.617,107.299)
OP2: (-3.827,110.134,107.548)
C4: (-8.042,115.252,105.340)
O5': (-6.101,110.986,108.121)
C3': (-8.447,111.642,109.661)
C1': (-8.074,113.951,109.299)
O4': (-6.829,113.338,109.562)
C5': (-5.987,111.080,109.541)
P: (-4.822,111.187,107.203)
O2: (-9.821,115.756,108.277)
C4': (-7.040,112.006,110.077)
C2': (-9.182,112.980,109.713)
O2': (-9.622,113.304,111.020)
N1: (-8.079,114.355,107.887)
N3: (-8.935,115.763,106.186)
N4: (-8.006,115.738,104.112)
C6: (-7.193,113.810,107.000)
C5: (-7.141,114.226,105.728)
O3': (-8.952,110.705,110.582)
OP1: (-4.437,112.617,107.299)
OP2: (-3.827,110.134,107.548)
C4: (-8.042,115.252,105.340)
O5': (-6.101,110.986,108.121)
C3': (-8.447,111.642,109.661)
C1': (-8.074,113.951,109.299)
O4': (-6.829,113.338,109.562)
C5': (-5.987,111.080,109.541)
P: (-4.822,111.187,107.203)
O2: (-9.821,115.756,108.277)
C4': (-7.040,112.006,110.077)
C2': (-9.182,112.980,109.713)
O2': (-9.622,113.304,111.020)
N1: (-8.079,114.355,107.887)
N3: (-8.935,115.763,106.186)
N4: (-8.006,115.738,104.112)
C6: (-7.193,113.810,107.000)
C5: (-7.141,114.226,105.728)
O3': (-8.952,110.705,110.582)
C2: (-7.351,116.586,100.177)
OP1: (1.282,114.718,100.362)
OP2: (-0.106,115.896,98.538)
C4: (-7.254,117.718,98.170)
O5': (-1.067,115.457,100.818)
C3': (-4.446,113.724,100.773)
C1': (-5.335,115.824,101.331)
O4': (-3.929,115.948,101.227)
C5': (-2.121,114.644,100.287)
P: (0.262,115.727,99.977)
O2: (-7.981,116.106,101.118)
C4': (-3.317,114.638,101.216)
C2': (-5.673,114.345,101.418)
O2': (-5.794,114.027,102.789)
N1: (-5.971,116.498,100.194)
N3: (-7.971,117.193,99.147)
N4: (-7.905,118.323,97.199)
C6: (-5.236,117.035,99.178)
C5: (-5.830,117.651,98.157)
O3': (-4.216,112.389,101.181)
OP1: (1.282,114.718,100.362)
OP2: (-0.106,115.896,98.538)
C4: (-7.254,117.718,98.170)
O5': (-1.067,115.457,100.818)
C3': (-4.446,113.724,100.773)
C1': (-5.335,115.824,101.331)
O4': (-3.929,115.948,101.227)
C5': (-2.121,114.644,100.287)
P: (0.262,115.727,99.977)
O2: (-7.981,116.106,101.118)
C4': (-3.317,114.638,101.216)
C2': (-5.673,114.345,101.418)
O2': (-5.794,114.027,102.789)
N1: (-5.971,116.498,100.194)
N3: (-7.971,117.193,99.147)
N4: (-7.905,118.323,97.199)
C6: (-5.236,117.035,99.178)
C5: (-5.830,117.651,98.157)
O3': (-4.216,112.389,101.181)
Image (generated by PyMOL):