Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A547:A586
Extra
PDB:
ATOM 1 O3' C A 546 -9.082 117.042 102.736 1.00 73.84 O
ATOM 2 P U A 547 -9.436 115.491 102.992 1.00 75.89 P
ATOM 3 OP1 U A 547 -8.573 115.039 104.112 1.00 75.82 O
ATOM 4 OP2 U A 547 -9.405 114.759 101.699 1.00 74.70 O
ATOM 5 O5' U A 547 -10.951 115.512 103.490 1.00 76.67 O
ATOM 6 C5' U A 547 -11.953 116.201 102.727 1.00 77.08 C
ATOM 7 C4' U A 547 -13.334 115.907 103.248 1.00 77.85 C
ATOM 8 O4' U A 547 -14.280 116.645 102.423 1.00 79.15 O
ATOM 9 C3' U A 547 -13.763 114.447 103.159 1.00 77.60 C
ATOM 10 O3' U A 547 -13.507 113.741 104.369 1.00 75.16 O
ATOM 11 C2' U A 547 -15.242 114.544 102.804 1.00 78.76 C
ATOM 12 O2' U A 547 -16.066 114.822 103.919 1.00 79.02 O
ATOM 13 C1' U A 547 -15.228 115.754 101.868 1.00 80.25 C
ATOM 14 N1 U A 547 -14.814 115.442 100.487 1.00 82.33 N
ATOM 15 C2 U A 547 -15.805 115.318 99.526 1.00 84.10 C
ATOM 16 O2 U A 547 -16.995 115.468 99.766 1.00 85.96 O
ATOM 17 N3 U A 547 -15.352 115.014 98.264 1.00 84.95 N
ATOM 18 C4 U A 547 -14.040 114.829 97.869 1.00 84.65 C
ATOM 19 O4 U A 547 -13.797 114.505 96.704 1.00 84.93 O
ATOM 20 C5 U A 547 -13.078 114.983 98.913 1.00 84.28 C
ATOM 21 C6 U A 547 -13.485 115.274 100.151 1.00 83.12 C
ATOM 22 P C A 548 -13.245 112.155 104.333 1.00 74.40 P
ATOM 23 OP1 C A 548 -13.366 111.703 105.738 1.00 73.90 O
ATOM 24 OP2 C A 548 -11.988 111.889 103.586 1.00 74.83 O
ATOM 25 O5' C A 548 -14.455 111.560 103.477 1.00 73.89 O
TER
ATOM 1 O3' A B 585 -17.472 110.554 87.391 1.00 64.24 O
ATOM 2 P C B 586 -17.735 112.131 87.491 1.00 66.91 P
ATOM 3 OP1 C B 586 -18.596 112.534 86.350 1.00 66.59 O
ATOM 4 OP2 C B 586 -16.417 112.786 87.683 1.00 66.61 O
ATOM 5 O5' C B 586 -18.571 112.284 88.837 1.00 68.61 O
ATOM 6 C5' C B 586 -19.914 111.761 88.932 1.00 72.86 C
ATOM 7 C4' C B 586 -20.531 112.120 90.264 1.00 75.21 C
ATOM 8 O4' C B 586 -19.846 111.418 91.334 1.00 76.01 O
ATOM 9 C3' C B 586 -20.415 113.582 90.657 1.00 76.11 C
ATOM 10 O3' C B 586 -21.396 114.391 90.033 1.00 75.95 O
ATOM 11 C2' C B 586 -20.565 113.536 92.172 1.00 77.02 C
ATOM 12 O2' C B 586 -21.900 113.504 92.632 1.00 77.65 O
ATOM 13 C1' C B 586 -19.842 112.228 92.502 1.00 77.59 C
ATOM 14 N1 C B 586 -18.452 112.483 92.899 1.00 79.34 N
ATOM 15 C2 C B 586 -18.171 112.672 94.253 1.00 81.20 C
ATOM 16 O2 C B 586 -19.101 112.607 95.079 1.00 82.98 O
ATOM 17 N3 C B 586 -16.902 112.926 94.632 1.00 81.72 N
ATOM 18 C4 C B 586 -15.932 112.992 93.718 1.00 81.02 C
ATOM 19 N4 C B 586 -14.696 113.241 94.145 1.00 81.24 N
ATOM 20 C5 C B 586 -16.189 112.804 92.331 1.00 80.89 C
ATOM 21 C6 C B 586 -17.450 112.550 91.969 1.00 80.21 C
ATOM 22 P G B 587 -21.078 115.935 89.753 1.00 76.22 P
ATOM 23 OP1 G B 587 -22.286 116.534 89.141 1.00 77.64 O
ATOM 24 OP2 G B 587 -19.777 116.025 89.044 1.00 77.87 O
ATOM 25 O5' G B 587 -20.917 116.549 91.210 1.00 74.70 O
TER
ATOM 2 P U A 547 -9.436 115.491 102.992 1.00 75.89 P
ATOM 3 OP1 U A 547 -8.573 115.039 104.112 1.00 75.82 O
ATOM 4 OP2 U A 547 -9.405 114.759 101.699 1.00 74.70 O
ATOM 5 O5' U A 547 -10.951 115.512 103.490 1.00 76.67 O
ATOM 6 C5' U A 547 -11.953 116.201 102.727 1.00 77.08 C
ATOM 7 C4' U A 547 -13.334 115.907 103.248 1.00 77.85 C
ATOM 8 O4' U A 547 -14.280 116.645 102.423 1.00 79.15 O
ATOM 9 C3' U A 547 -13.763 114.447 103.159 1.00 77.60 C
ATOM 10 O3' U A 547 -13.507 113.741 104.369 1.00 75.16 O
ATOM 11 C2' U A 547 -15.242 114.544 102.804 1.00 78.76 C
ATOM 12 O2' U A 547 -16.066 114.822 103.919 1.00 79.02 O
ATOM 13 C1' U A 547 -15.228 115.754 101.868 1.00 80.25 C
ATOM 14 N1 U A 547 -14.814 115.442 100.487 1.00 82.33 N
ATOM 15 C2 U A 547 -15.805 115.318 99.526 1.00 84.10 C
ATOM 16 O2 U A 547 -16.995 115.468 99.766 1.00 85.96 O
ATOM 17 N3 U A 547 -15.352 115.014 98.264 1.00 84.95 N
ATOM 18 C4 U A 547 -14.040 114.829 97.869 1.00 84.65 C
ATOM 19 O4 U A 547 -13.797 114.505 96.704 1.00 84.93 O
ATOM 20 C5 U A 547 -13.078 114.983 98.913 1.00 84.28 C
ATOM 21 C6 U A 547 -13.485 115.274 100.151 1.00 83.12 C
ATOM 22 P C A 548 -13.245 112.155 104.333 1.00 74.40 P
ATOM 23 OP1 C A 548 -13.366 111.703 105.738 1.00 73.90 O
ATOM 24 OP2 C A 548 -11.988 111.889 103.586 1.00 74.83 O
ATOM 25 O5' C A 548 -14.455 111.560 103.477 1.00 73.89 O
TER
ATOM 1 O3' A B 585 -17.472 110.554 87.391 1.00 64.24 O
ATOM 2 P C B 586 -17.735 112.131 87.491 1.00 66.91 P
ATOM 3 OP1 C B 586 -18.596 112.534 86.350 1.00 66.59 O
ATOM 4 OP2 C B 586 -16.417 112.786 87.683 1.00 66.61 O
ATOM 5 O5' C B 586 -18.571 112.284 88.837 1.00 68.61 O
ATOM 6 C5' C B 586 -19.914 111.761 88.932 1.00 72.86 C
ATOM 7 C4' C B 586 -20.531 112.120 90.264 1.00 75.21 C
ATOM 8 O4' C B 586 -19.846 111.418 91.334 1.00 76.01 O
ATOM 9 C3' C B 586 -20.415 113.582 90.657 1.00 76.11 C
ATOM 10 O3' C B 586 -21.396 114.391 90.033 1.00 75.95 O
ATOM 11 C2' C B 586 -20.565 113.536 92.172 1.00 77.02 C
ATOM 12 O2' C B 586 -21.900 113.504 92.632 1.00 77.65 O
ATOM 13 C1' C B 586 -19.842 112.228 92.502 1.00 77.59 C
ATOM 14 N1 C B 586 -18.452 112.483 92.899 1.00 79.34 N
ATOM 15 C2 C B 586 -18.171 112.672 94.253 1.00 81.20 C
ATOM 16 O2 C B 586 -19.101 112.607 95.079 1.00 82.98 O
ATOM 17 N3 C B 586 -16.902 112.926 94.632 1.00 81.72 N
ATOM 18 C4 C B 586 -15.932 112.992 93.718 1.00 81.02 C
ATOM 19 N4 C B 586 -14.696 113.241 94.145 1.00 81.24 N
ATOM 20 C5 C B 586 -16.189 112.804 92.331 1.00 80.89 C
ATOM 21 C6 C B 586 -17.450 112.550 91.969 1.00 80.21 C
ATOM 22 P G B 587 -21.078 115.935 89.753 1.00 76.22 P
ATOM 23 OP1 G B 587 -22.286 116.534 89.141 1.00 77.64 O
ATOM 24 OP2 G B 587 -19.777 116.025 89.044 1.00 77.87 O
ATOM 25 O5' G B 587 -20.917 116.549 91.210 1.00 74.70 O
TER
Atoms:
C4: (-14.040,114.829,97.869)
N3: (-15.352,115.014,98.264)
OP1: (-8.573,115.039,104.112)
OP2: (-9.405,114.759,101.699)
C2: (-15.805,115.318,99.526)
C1': (-15.228,115.754,101.868)
C3': (-13.763,114.447,103.159)
O5': (-10.951,115.512,103.490)
O4': (-14.280,116.645,102.423)
C5': (-11.953,116.201,102.727)
P: (-9.436,115.491,102.992)
C4': (-13.334,115.907,103.248)
C2': (-15.242,114.544,102.804)
O2': (-16.066,114.822,103.919)
N1: (-14.814,115.442,100.487)
O4: (-13.797,114.505,96.704)
O2: (-16.995,115.468,99.766)
C6: (-13.485,115.274,100.151)
C5: (-13.078,114.983,98.913)
O3': (-13.507,113.741,104.369)
N3: (-15.352,115.014,98.264)
OP1: (-8.573,115.039,104.112)
OP2: (-9.405,114.759,101.699)
C2: (-15.805,115.318,99.526)
C1': (-15.228,115.754,101.868)
C3': (-13.763,114.447,103.159)
O5': (-10.951,115.512,103.490)
O4': (-14.280,116.645,102.423)
C5': (-11.953,116.201,102.727)
P: (-9.436,115.491,102.992)
C4': (-13.334,115.907,103.248)
C2': (-15.242,114.544,102.804)
O2': (-16.066,114.822,103.919)
N1: (-14.814,115.442,100.487)
O4: (-13.797,114.505,96.704)
O2: (-16.995,115.468,99.766)
C6: (-13.485,115.274,100.151)
C5: (-13.078,114.983,98.913)
O3': (-13.507,113.741,104.369)
C2: (-18.171,112.672,94.253)
OP1: (-18.596,112.534,86.350)
OP2: (-16.417,112.786,87.683)
C4: (-15.932,112.992,93.718)
O5': (-18.571,112.284,88.837)
C3': (-20.415,113.582,90.657)
C1': (-19.842,112.228,92.502)
O4': (-19.846,111.418,91.334)
C5': (-19.914,111.761,88.932)
P: (-17.735,112.131,87.491)
O2: (-19.101,112.607,95.079)
C4': (-20.531,112.120,90.264)
C2': (-20.565,113.536,92.172)
O2': (-21.900,113.504,92.632)
N1: (-18.452,112.483,92.899)
N3: (-16.902,112.926,94.632)
N4: (-14.696,113.241,94.145)
C6: (-17.450,112.550,91.969)
C5: (-16.189,112.804,92.331)
O3': (-21.396,114.391,90.033)
OP1: (-18.596,112.534,86.350)
OP2: (-16.417,112.786,87.683)
C4: (-15.932,112.992,93.718)
O5': (-18.571,112.284,88.837)
C3': (-20.415,113.582,90.657)
C1': (-19.842,112.228,92.502)
O4': (-19.846,111.418,91.334)
C5': (-19.914,111.761,88.932)
P: (-17.735,112.131,87.491)
O2: (-19.101,112.607,95.079)
C4': (-20.531,112.120,90.264)
C2': (-20.565,113.536,92.172)
O2': (-21.900,113.504,92.632)
N1: (-18.452,112.483,92.899)
N3: (-16.902,112.926,94.632)
N4: (-14.696,113.241,94.145)
C6: (-17.450,112.550,91.969)
C5: (-16.189,112.804,92.331)
O3': (-21.396,114.391,90.033)
Image (generated by PyMOL):