Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0547:0586
Extra
PDB:
ATOM 1 O3' C A 546 -9.578 117.109 102.910 1.00 87.51 O
ATOM 2 P U A 547 -9.900 115.544 103.108 1.00 88.74 P
ATOM 3 OP1 U A 547 -9.060 115.057 104.234 1.00 88.55 O
ATOM 4 OP2 U A 547 -9.816 114.869 101.789 1.00 87.22 O
ATOM 5 O5' U A 547 -11.426 115.525 103.568 1.00 89.39 O
ATOM 6 C5' U A 547 -12.405 116.288 102.855 1.00 90.74 C
ATOM 7 C4' U A 547 -13.799 115.981 103.338 1.00 92.35 C
ATOM 8 O4' U A 547 -14.724 116.744 102.514 1.00 92.95 O
ATOM 9 C3' U A 547 -14.232 114.525 103.200 1.00 93.56 C
ATOM 10 O3' U A 547 -14.011 113.788 104.399 1.00 93.89 O
ATOM 11 C2' U A 547 -15.702 114.638 102.825 1.00 93.76 C
ATOM 12 O2' U A 547 -16.529 114.878 103.947 1.00 93.60 O
ATOM 13 C1' U A 547 -15.674 115.875 101.925 1.00 94.31 C
ATOM 14 N1 U A 547 -15.257 115.600 100.537 1.00 94.98 N
ATOM 15 C2 U A 547 -16.246 115.428 99.577 1.00 96.18 C
ATOM 16 O2 U A 547 -17.441 115.517 99.821 1.00 97.91 O
ATOM 17 N3 U A 547 -15.783 115.149 98.315 1.00 96.54 N
ATOM 18 C4 U A 547 -14.467 115.032 97.918 1.00 96.54 C
ATOM 19 O4 U A 547 -14.209 114.763 96.744 1.00 96.57 O
ATOM 20 C5 U A 547 -13.512 115.237 98.955 1.00 96.27 C
ATOM 21 C6 U A 547 -13.926 115.505 100.194 1.00 95.39 C
ATOM 22 P C A 548 -13.839 112.190 104.335 1.00 94.18 P
ATOM 23 OP1 C A 548 -14.001 111.668 105.717 1.00 94.15 O
ATOM 24 OP2 C A 548 -12.592 111.894 103.586 1.00 94.88 O
ATOM 25 O5' C A 548 -15.082 111.698 103.464 1.00 92.06 O
TER
ATOM 1 O3' A B 585 -17.663 110.518 87.449 1.00 79.69 O
ATOM 2 P C B 586 -17.903 112.105 87.460 1.00 82.36 P
ATOM 3 OP1 C B 586 -18.693 112.437 86.247 1.00 82.93 O
ATOM 4 OP2 C B 586 -16.596 112.768 87.685 1.00 82.78 O
ATOM 5 O5' C B 586 -18.804 112.359 88.753 1.00 84.68 O
ATOM 6 C5' C B 586 -20.187 111.939 88.798 1.00 85.76 C
ATOM 7 C4' C B 586 -20.833 112.373 90.099 1.00 86.73 C
ATOM 8 O4' C B 586 -20.211 111.686 91.220 1.00 87.47 O
ATOM 9 C3' C B 586 -20.691 113.843 90.452 1.00 87.19 C
ATOM 10 O3' C B 586 -21.623 114.676 89.784 1.00 86.15 O
ATOM 11 C2' C B 586 -20.897 113.848 91.961 1.00 88.59 C
ATOM 12 O2' C B 586 -22.254 113.849 92.358 1.00 88.62 O
ATOM 13 C1' C B 586 -20.209 112.539 92.361 1.00 89.67 C
ATOM 14 N1 C B 586 -18.815 112.763 92.803 1.00 91.82 N
ATOM 15 C2 C B 586 -18.574 113.044 94.157 1.00 92.87 C
ATOM 16 O2 C B 586 -19.530 113.070 94.948 1.00 94.86 O
ATOM 17 N3 C B 586 -17.308 113.281 94.568 1.00 93.20 N
ATOM 18 C4 C B 586 -16.304 113.245 93.691 1.00 93.26 C
ATOM 19 N4 C B 586 -15.072 113.491 94.141 1.00 93.15 N
ATOM 20 C5 C B 586 -16.517 112.955 92.312 1.00 93.38 C
ATOM 21 C6 C B 586 -17.774 112.719 91.915 1.00 92.68 C
ATOM 22 P G B 587 -21.352 116.256 89.712 1.00 87.11 P
ATOM 23 OP1 G B 587 -22.556 116.904 89.139 1.00 88.45 O
ATOM 24 OP2 G B 587 -20.037 116.461 89.059 1.00 88.37 O
ATOM 25 O5' G B 587 -21.231 116.701 91.237 1.00 86.27 O
TER
ATOM 2 P U A 547 -9.900 115.544 103.108 1.00 88.74 P
ATOM 3 OP1 U A 547 -9.060 115.057 104.234 1.00 88.55 O
ATOM 4 OP2 U A 547 -9.816 114.869 101.789 1.00 87.22 O
ATOM 5 O5' U A 547 -11.426 115.525 103.568 1.00 89.39 O
ATOM 6 C5' U A 547 -12.405 116.288 102.855 1.00 90.74 C
ATOM 7 C4' U A 547 -13.799 115.981 103.338 1.00 92.35 C
ATOM 8 O4' U A 547 -14.724 116.744 102.514 1.00 92.95 O
ATOM 9 C3' U A 547 -14.232 114.525 103.200 1.00 93.56 C
ATOM 10 O3' U A 547 -14.011 113.788 104.399 1.00 93.89 O
ATOM 11 C2' U A 547 -15.702 114.638 102.825 1.00 93.76 C
ATOM 12 O2' U A 547 -16.529 114.878 103.947 1.00 93.60 O
ATOM 13 C1' U A 547 -15.674 115.875 101.925 1.00 94.31 C
ATOM 14 N1 U A 547 -15.257 115.600 100.537 1.00 94.98 N
ATOM 15 C2 U A 547 -16.246 115.428 99.577 1.00 96.18 C
ATOM 16 O2 U A 547 -17.441 115.517 99.821 1.00 97.91 O
ATOM 17 N3 U A 547 -15.783 115.149 98.315 1.00 96.54 N
ATOM 18 C4 U A 547 -14.467 115.032 97.918 1.00 96.54 C
ATOM 19 O4 U A 547 -14.209 114.763 96.744 1.00 96.57 O
ATOM 20 C5 U A 547 -13.512 115.237 98.955 1.00 96.27 C
ATOM 21 C6 U A 547 -13.926 115.505 100.194 1.00 95.39 C
ATOM 22 P C A 548 -13.839 112.190 104.335 1.00 94.18 P
ATOM 23 OP1 C A 548 -14.001 111.668 105.717 1.00 94.15 O
ATOM 24 OP2 C A 548 -12.592 111.894 103.586 1.00 94.88 O
ATOM 25 O5' C A 548 -15.082 111.698 103.464 1.00 92.06 O
TER
ATOM 1 O3' A B 585 -17.663 110.518 87.449 1.00 79.69 O
ATOM 2 P C B 586 -17.903 112.105 87.460 1.00 82.36 P
ATOM 3 OP1 C B 586 -18.693 112.437 86.247 1.00 82.93 O
ATOM 4 OP2 C B 586 -16.596 112.768 87.685 1.00 82.78 O
ATOM 5 O5' C B 586 -18.804 112.359 88.753 1.00 84.68 O
ATOM 6 C5' C B 586 -20.187 111.939 88.798 1.00 85.76 C
ATOM 7 C4' C B 586 -20.833 112.373 90.099 1.00 86.73 C
ATOM 8 O4' C B 586 -20.211 111.686 91.220 1.00 87.47 O
ATOM 9 C3' C B 586 -20.691 113.843 90.452 1.00 87.19 C
ATOM 10 O3' C B 586 -21.623 114.676 89.784 1.00 86.15 O
ATOM 11 C2' C B 586 -20.897 113.848 91.961 1.00 88.59 C
ATOM 12 O2' C B 586 -22.254 113.849 92.358 1.00 88.62 O
ATOM 13 C1' C B 586 -20.209 112.539 92.361 1.00 89.67 C
ATOM 14 N1 C B 586 -18.815 112.763 92.803 1.00 91.82 N
ATOM 15 C2 C B 586 -18.574 113.044 94.157 1.00 92.87 C
ATOM 16 O2 C B 586 -19.530 113.070 94.948 1.00 94.86 O
ATOM 17 N3 C B 586 -17.308 113.281 94.568 1.00 93.20 N
ATOM 18 C4 C B 586 -16.304 113.245 93.691 1.00 93.26 C
ATOM 19 N4 C B 586 -15.072 113.491 94.141 1.00 93.15 N
ATOM 20 C5 C B 586 -16.517 112.955 92.312 1.00 93.38 C
ATOM 21 C6 C B 586 -17.774 112.719 91.915 1.00 92.68 C
ATOM 22 P G B 587 -21.352 116.256 89.712 1.00 87.11 P
ATOM 23 OP1 G B 587 -22.556 116.904 89.139 1.00 88.45 O
ATOM 24 OP2 G B 587 -20.037 116.461 89.059 1.00 88.37 O
ATOM 25 O5' G B 587 -21.231 116.701 91.237 1.00 86.27 O
TER
Atoms:
C4: (-14.467,115.032,97.918)
N3: (-15.783,115.149,98.315)
OP1: (-9.060,115.057,104.234)
OP2: (-9.816,114.869,101.789)
C2: (-16.246,115.428,99.577)
C1': (-15.674,115.875,101.925)
C3': (-14.232,114.525,103.200)
O5': (-11.426,115.525,103.568)
O4': (-14.724,116.744,102.514)
C5': (-12.405,116.288,102.855)
P: (-9.900,115.544,103.108)
C4': (-13.799,115.981,103.338)
C2': (-15.702,114.638,102.825)
O2': (-16.529,114.878,103.947)
N1: (-15.257,115.600,100.537)
O4: (-14.209,114.763,96.744)
O2: (-17.441,115.517,99.821)
C6: (-13.926,115.505,100.194)
C5: (-13.512,115.237,98.955)
O3': (-14.011,113.788,104.399)
N3: (-15.783,115.149,98.315)
OP1: (-9.060,115.057,104.234)
OP2: (-9.816,114.869,101.789)
C2: (-16.246,115.428,99.577)
C1': (-15.674,115.875,101.925)
C3': (-14.232,114.525,103.200)
O5': (-11.426,115.525,103.568)
O4': (-14.724,116.744,102.514)
C5': (-12.405,116.288,102.855)
P: (-9.900,115.544,103.108)
C4': (-13.799,115.981,103.338)
C2': (-15.702,114.638,102.825)
O2': (-16.529,114.878,103.947)
N1: (-15.257,115.600,100.537)
O4: (-14.209,114.763,96.744)
O2: (-17.441,115.517,99.821)
C6: (-13.926,115.505,100.194)
C5: (-13.512,115.237,98.955)
O3': (-14.011,113.788,104.399)
C2: (-18.574,113.044,94.157)
OP1: (-18.693,112.437,86.247)
OP2: (-16.596,112.768,87.685)
C4: (-16.304,113.245,93.691)
O5': (-18.804,112.359,88.753)
C3': (-20.691,113.843,90.452)
C1': (-20.209,112.539,92.361)
O4': (-20.211,111.686,91.220)
C5': (-20.187,111.939,88.798)
P: (-17.903,112.105,87.460)
O2: (-19.530,113.070,94.948)
C4': (-20.833,112.373,90.099)
C2': (-20.897,113.848,91.961)
O2': (-22.254,113.849,92.358)
N1: (-18.815,112.763,92.803)
N3: (-17.308,113.281,94.568)
N4: (-15.072,113.491,94.141)
C6: (-17.774,112.719,91.915)
C5: (-16.517,112.955,92.312)
O3': (-21.623,114.676,89.784)
OP1: (-18.693,112.437,86.247)
OP2: (-16.596,112.768,87.685)
C4: (-16.304,113.245,93.691)
O5': (-18.804,112.359,88.753)
C3': (-20.691,113.843,90.452)
C1': (-20.209,112.539,92.361)
O4': (-20.211,111.686,91.220)
C5': (-20.187,111.939,88.798)
P: (-17.903,112.105,87.460)
O2: (-19.530,113.070,94.948)
C4': (-20.833,112.373,90.099)
C2': (-20.897,113.848,91.961)
O2': (-22.254,113.849,92.358)
N1: (-18.815,112.763,92.803)
N3: (-17.308,113.281,94.568)
N4: (-15.072,113.491,94.141)
C6: (-17.774,112.719,91.915)
C5: (-16.517,112.955,92.312)
O3': (-21.623,114.676,89.784)
Image (generated by PyMOL):