Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0547:0586
Extra
PDB:
ATOM 1 O3' C A 546 -8.851 115.984 103.233 1.00 64.53 O
ATOM 2 P U A 547 -9.188 114.422 103.483 1.00 66.42 P
ATOM 3 OP1 U A 547 -8.257 113.900 104.518 1.00 65.00 O
ATOM 4 OP2 U A 547 -9.271 113.739 102.163 1.00 64.24 O
ATOM 5 O5' U A 547 -10.659 114.442 104.099 1.00 65.56 O
ATOM 6 C5' U A 547 -11.681 115.219 103.465 1.00 66.35 C
ATOM 7 C4' U A 547 -13.052 114.861 103.973 1.00 65.49 C
ATOM 8 O4' U A 547 -14.004 115.596 103.153 1.00 67.25 O
ATOM 9 C3' U A 547 -13.447 113.396 103.841 1.00 65.23 C
ATOM 10 O3' U A 547 -13.183 112.673 105.038 1.00 62.93 O
ATOM 11 C2' U A 547 -14.929 113.474 103.497 1.00 66.06 C
ATOM 12 O2' U A 547 -15.741 113.722 104.626 1.00 65.68 O
ATOM 13 C1' U A 547 -14.945 114.703 102.588 1.00 67.26 C
ATOM 14 N1 U A 547 -14.549 114.423 101.194 1.00 67.73 N
ATOM 15 C2 U A 547 -15.555 114.312 100.248 1.00 69.11 C
ATOM 16 O2 U A 547 -16.741 114.456 100.512 1.00 71.36 O
ATOM 17 N3 U A 547 -15.125 114.026 98.974 1.00 70.24 N
ATOM 18 C4 U A 547 -13.819 113.842 98.555 1.00 70.30 C
ATOM 19 O4 U A 547 -13.594 113.534 97.379 1.00 70.08 O
ATOM 20 C5 U A 547 -12.839 113.987 99.586 1.00 69.36 C
ATOM 21 C6 U A 547 -13.226 114.265 100.834 1.00 68.37 C
ATOM 22 P C A 548 -13.050 111.071 104.992 1.00 62.12 P
ATOM 23 OP1 C A 548 -13.292 110.600 106.377 1.00 62.33 O
ATOM 24 OP2 C A 548 -11.776 110.713 104.311 1.00 62.81 O
ATOM 25 O5' C A 548 -14.266 110.593 104.076 1.00 59.55 O
TER
ATOM 1 O3' A B 585 -17.496 109.876 88.002 1.00 57.50 O
ATOM 2 P C B 586 -17.783 111.456 88.114 1.00 59.20 P
ATOM 3 OP1 C B 586 -18.684 111.804 86.983 1.00 58.79 O
ATOM 4 OP2 C B 586 -16.500 112.183 88.273 1.00 58.61 O
ATOM 5 O5' C B 586 -18.583 111.594 89.488 1.00 60.06 O
ATOM 6 C5' C B 586 -19.848 110.924 89.678 1.00 59.91 C
ATOM 7 C4' C B 586 -20.372 111.155 91.079 1.00 60.82 C
ATOM 8 O4' C B 586 -19.546 110.463 92.054 1.00 61.31 O
ATOM 9 C3' C B 586 -20.370 112.592 91.564 1.00 61.89 C
ATOM 10 O3' C B 586 -21.453 113.342 91.030 1.00 62.76 O
ATOM 11 C2' C B 586 -20.437 112.421 93.079 1.00 62.32 C
ATOM 12 O2' C B 586 -21.738 112.158 93.570 1.00 61.95 O
ATOM 13 C1' C B 586 -19.558 111.183 93.279 1.00 62.20 C
ATOM 14 N1 C B 586 -18.171 111.507 93.664 1.00 63.91 N
ATOM 15 C2 C B 586 -17.837 111.545 95.037 1.00 65.49 C
ATOM 16 O2 C B 586 -18.712 111.289 95.888 1.00 67.36 O
ATOM 17 N3 C B 586 -16.570 111.857 95.397 1.00 65.14 N
ATOM 18 C4 C B 586 -15.653 112.119 94.463 1.00 64.16 C
ATOM 19 N4 C B 586 -14.419 112.423 94.872 1.00 63.46 N
ATOM 20 C5 C B 586 -15.961 112.081 93.069 1.00 63.64 C
ATOM 21 C6 C B 586 -17.218 111.775 92.718 1.00 63.93 C
ATOM 22 P G B 587 -21.257 114.908 90.731 1.00 64.65 P
ATOM 23 OP1 G B 587 -22.539 115.450 90.210 1.00 65.88 O
ATOM 24 OP2 G B 587 -20.019 115.070 89.925 1.00 65.02 O
ATOM 25 O5' G B 587 -21.013 115.529 92.177 1.00 62.87 O
TER
ATOM 2 P U A 547 -9.188 114.422 103.483 1.00 66.42 P
ATOM 3 OP1 U A 547 -8.257 113.900 104.518 1.00 65.00 O
ATOM 4 OP2 U A 547 -9.271 113.739 102.163 1.00 64.24 O
ATOM 5 O5' U A 547 -10.659 114.442 104.099 1.00 65.56 O
ATOM 6 C5' U A 547 -11.681 115.219 103.465 1.00 66.35 C
ATOM 7 C4' U A 547 -13.052 114.861 103.973 1.00 65.49 C
ATOM 8 O4' U A 547 -14.004 115.596 103.153 1.00 67.25 O
ATOM 9 C3' U A 547 -13.447 113.396 103.841 1.00 65.23 C
ATOM 10 O3' U A 547 -13.183 112.673 105.038 1.00 62.93 O
ATOM 11 C2' U A 547 -14.929 113.474 103.497 1.00 66.06 C
ATOM 12 O2' U A 547 -15.741 113.722 104.626 1.00 65.68 O
ATOM 13 C1' U A 547 -14.945 114.703 102.588 1.00 67.26 C
ATOM 14 N1 U A 547 -14.549 114.423 101.194 1.00 67.73 N
ATOM 15 C2 U A 547 -15.555 114.312 100.248 1.00 69.11 C
ATOM 16 O2 U A 547 -16.741 114.456 100.512 1.00 71.36 O
ATOM 17 N3 U A 547 -15.125 114.026 98.974 1.00 70.24 N
ATOM 18 C4 U A 547 -13.819 113.842 98.555 1.00 70.30 C
ATOM 19 O4 U A 547 -13.594 113.534 97.379 1.00 70.08 O
ATOM 20 C5 U A 547 -12.839 113.987 99.586 1.00 69.36 C
ATOM 21 C6 U A 547 -13.226 114.265 100.834 1.00 68.37 C
ATOM 22 P C A 548 -13.050 111.071 104.992 1.00 62.12 P
ATOM 23 OP1 C A 548 -13.292 110.600 106.377 1.00 62.33 O
ATOM 24 OP2 C A 548 -11.776 110.713 104.311 1.00 62.81 O
ATOM 25 O5' C A 548 -14.266 110.593 104.076 1.00 59.55 O
TER
ATOM 1 O3' A B 585 -17.496 109.876 88.002 1.00 57.50 O
ATOM 2 P C B 586 -17.783 111.456 88.114 1.00 59.20 P
ATOM 3 OP1 C B 586 -18.684 111.804 86.983 1.00 58.79 O
ATOM 4 OP2 C B 586 -16.500 112.183 88.273 1.00 58.61 O
ATOM 5 O5' C B 586 -18.583 111.594 89.488 1.00 60.06 O
ATOM 6 C5' C B 586 -19.848 110.924 89.678 1.00 59.91 C
ATOM 7 C4' C B 586 -20.372 111.155 91.079 1.00 60.82 C
ATOM 8 O4' C B 586 -19.546 110.463 92.054 1.00 61.31 O
ATOM 9 C3' C B 586 -20.370 112.592 91.564 1.00 61.89 C
ATOM 10 O3' C B 586 -21.453 113.342 91.030 1.00 62.76 O
ATOM 11 C2' C B 586 -20.437 112.421 93.079 1.00 62.32 C
ATOM 12 O2' C B 586 -21.738 112.158 93.570 1.00 61.95 O
ATOM 13 C1' C B 586 -19.558 111.183 93.279 1.00 62.20 C
ATOM 14 N1 C B 586 -18.171 111.507 93.664 1.00 63.91 N
ATOM 15 C2 C B 586 -17.837 111.545 95.037 1.00 65.49 C
ATOM 16 O2 C B 586 -18.712 111.289 95.888 1.00 67.36 O
ATOM 17 N3 C B 586 -16.570 111.857 95.397 1.00 65.14 N
ATOM 18 C4 C B 586 -15.653 112.119 94.463 1.00 64.16 C
ATOM 19 N4 C B 586 -14.419 112.423 94.872 1.00 63.46 N
ATOM 20 C5 C B 586 -15.961 112.081 93.069 1.00 63.64 C
ATOM 21 C6 C B 586 -17.218 111.775 92.718 1.00 63.93 C
ATOM 22 P G B 587 -21.257 114.908 90.731 1.00 64.65 P
ATOM 23 OP1 G B 587 -22.539 115.450 90.210 1.00 65.88 O
ATOM 24 OP2 G B 587 -20.019 115.070 89.925 1.00 65.02 O
ATOM 25 O5' G B 587 -21.013 115.529 92.177 1.00 62.87 O
TER
Atoms:
C4: (-13.819,113.842,98.555)
N3: (-15.125,114.026,98.974)
OP1: (-8.257,113.900,104.518)
OP2: (-9.271,113.739,102.163)
C2: (-15.555,114.312,100.248)
C1': (-14.945,114.703,102.588)
C3': (-13.447,113.396,103.841)
O5': (-10.659,114.442,104.099)
O4': (-14.004,115.596,103.153)
C5': (-11.681,115.219,103.465)
P: (-9.188,114.422,103.483)
C4': (-13.052,114.861,103.973)
C2': (-14.929,113.474,103.497)
O2': (-15.741,113.722,104.626)
N1: (-14.549,114.423,101.194)
O4: (-13.594,113.534,97.379)
O2: (-16.741,114.456,100.512)
C6: (-13.226,114.265,100.834)
C5: (-12.839,113.987,99.586)
O3': (-13.183,112.673,105.038)
N3: (-15.125,114.026,98.974)
OP1: (-8.257,113.900,104.518)
OP2: (-9.271,113.739,102.163)
C2: (-15.555,114.312,100.248)
C1': (-14.945,114.703,102.588)
C3': (-13.447,113.396,103.841)
O5': (-10.659,114.442,104.099)
O4': (-14.004,115.596,103.153)
C5': (-11.681,115.219,103.465)
P: (-9.188,114.422,103.483)
C4': (-13.052,114.861,103.973)
C2': (-14.929,113.474,103.497)
O2': (-15.741,113.722,104.626)
N1: (-14.549,114.423,101.194)
O4: (-13.594,113.534,97.379)
O2: (-16.741,114.456,100.512)
C6: (-13.226,114.265,100.834)
C5: (-12.839,113.987,99.586)
O3': (-13.183,112.673,105.038)
C2: (-17.837,111.545,95.037)
OP1: (-18.684,111.804,86.983)
OP2: (-16.500,112.183,88.273)
C4: (-15.653,112.119,94.463)
O5': (-18.583,111.594,89.488)
C3': (-20.370,112.592,91.564)
C1': (-19.558,111.183,93.279)
O4': (-19.546,110.463,92.054)
C5': (-19.848,110.924,89.678)
P: (-17.783,111.456,88.114)
O2: (-18.712,111.289,95.888)
C4': (-20.372,111.155,91.079)
C2': (-20.437,112.421,93.079)
O2': (-21.738,112.158,93.570)
N1: (-18.171,111.507,93.664)
N3: (-16.570,111.857,95.397)
N4: (-14.419,112.423,94.872)
C6: (-17.218,111.775,92.718)
C5: (-15.961,112.081,93.069)
O3': (-21.453,113.342,91.030)
OP1: (-18.684,111.804,86.983)
OP2: (-16.500,112.183,88.273)
C4: (-15.653,112.119,94.463)
O5': (-18.583,111.594,89.488)
C3': (-20.370,112.592,91.564)
C1': (-19.558,111.183,93.279)
O4': (-19.546,110.463,92.054)
C5': (-19.848,110.924,89.678)
P: (-17.783,111.456,88.114)
O2: (-18.712,111.289,95.888)
C4': (-20.372,111.155,91.079)
C2': (-20.437,112.421,93.079)
O2': (-21.738,112.158,93.570)
N1: (-18.171,111.507,93.664)
N3: (-16.570,111.857,95.397)
N4: (-14.419,112.423,94.872)
C6: (-17.218,111.775,92.718)
C5: (-15.961,112.081,93.069)
O3': (-21.453,113.342,91.030)
Image (generated by PyMOL):