Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0547:0586
Extra
PDB:
ATOM 1 O3' C A 546 -8.801 116.077 103.356 1.00 72.35 O
ATOM 2 P U A 547 -9.129 114.520 103.619 1.00 72.84 P
ATOM 3 OP1 U A 547 -8.239 114.028 104.696 1.00 72.78 O
ATOM 4 OP2 U A 547 -9.144 113.821 102.308 1.00 72.60 O
ATOM 5 O5' U A 547 -10.625 114.524 104.170 1.00 73.37 O
ATOM 6 C5' U A 547 -11.638 115.242 103.456 1.00 73.25 C
ATOM 7 C4' U A 547 -13.017 114.921 103.965 1.00 71.98 C
ATOM 8 O4' U A 547 -13.949 115.643 103.111 1.00 73.49 O
ATOM 9 C3' U A 547 -13.432 113.458 103.881 1.00 71.43 C
ATOM 10 O3' U A 547 -13.200 112.773 105.109 1.00 68.10 O
ATOM 11 C2' U A 547 -14.904 113.543 103.502 1.00 72.72 C
ATOM 12 O2' U A 547 -15.739 113.843 104.600 1.00 72.85 O
ATOM 13 C1' U A 547 -14.888 114.743 102.555 1.00 74.03 C
ATOM 14 N1 U A 547 -14.472 114.419 101.178 1.00 74.84 N
ATOM 15 C2 U A 547 -15.463 114.260 100.226 1.00 77.01 C
ATOM 16 O2 U A 547 -16.650 114.395 100.475 1.00 79.91 O
ATOM 17 N3 U A 547 -15.015 113.934 98.968 1.00 78.20 N
ATOM 18 C4 U A 547 -13.705 113.761 98.569 1.00 77.65 C
ATOM 19 O4 U A 547 -13.460 113.461 97.398 1.00 77.66 O
ATOM 20 C5 U A 547 -12.739 113.957 99.603 1.00 77.05 C
ATOM 21 C6 U A 547 -13.143 114.270 100.837 1.00 75.81 C
ATOM 22 P C A 548 -13.012 111.175 105.114 1.00 67.36 P
ATOM 23 OP1 C A 548 -13.257 110.736 106.507 1.00 68.59 O
ATOM 24 OP2 C A 548 -11.723 110.830 104.460 1.00 68.20 O
ATOM 25 O5' C A 548 -14.204 110.624 104.204 1.00 65.45 O
TER
ATOM 1 O3' A B 585 -17.460 109.922 88.132 1.00 65.19 O
ATOM 2 P C B 586 -17.753 111.502 88.242 1.00 66.81 P
ATOM 3 OP1 C B 586 -18.659 111.844 87.117 1.00 67.64 O
ATOM 4 OP2 C B 586 -16.470 112.229 88.393 1.00 67.00 O
ATOM 5 O5' C B 586 -18.555 111.653 89.611 1.00 67.92 O
ATOM 6 C5' C B 586 -19.835 111.009 89.794 1.00 68.24 C
ATOM 7 C4' C B 586 -20.346 111.227 91.201 1.00 69.11 C
ATOM 8 O4' C B 586 -19.506 110.529 92.159 1.00 69.19 O
ATOM 9 C3' C B 586 -20.340 112.660 91.696 1.00 70.29 C
ATOM 10 O3' C B 586 -21.440 113.412 91.198 1.00 70.38 O
ATOM 11 C2' C B 586 -20.375 112.483 93.209 1.00 70.80 C
ATOM 12 O2' C B 586 -21.668 112.221 93.716 1.00 71.02 O
ATOM 13 C1' C B 586 -19.490 111.245 93.384 1.00 70.94 C
ATOM 14 N1 C B 586 -18.094 111.572 93.733 1.00 73.71 N
ATOM 15 C2 C B 586 -17.735 111.636 95.091 1.00 75.80 C
ATOM 16 O2 C B 586 -18.593 111.397 95.959 1.00 78.86 O
ATOM 17 N3 C B 586 -16.464 111.954 95.423 1.00 76.03 N
ATOM 18 C4 C B 586 -15.565 112.195 94.468 1.00 74.69 C
ATOM 19 N4 C B 586 -14.325 112.505 94.848 1.00 74.39 N
ATOM 20 C5 C B 586 -15.899 112.130 93.084 1.00 74.17 C
ATOM 21 C6 C B 586 -17.161 111.819 92.764 1.00 73.72 C
ATOM 22 P G B 587 -21.247 114.972 90.885 1.00 71.40 P
ATOM 23 OP1 G B 587 -22.529 115.519 90.374 1.00 73.14 O
ATOM 24 OP2 G B 587 -20.018 115.117 90.066 1.00 72.61 O
ATOM 25 O5' G B 587 -20.980 115.608 92.320 1.00 69.82 O
TER
ATOM 2 P U A 547 -9.129 114.520 103.619 1.00 72.84 P
ATOM 3 OP1 U A 547 -8.239 114.028 104.696 1.00 72.78 O
ATOM 4 OP2 U A 547 -9.144 113.821 102.308 1.00 72.60 O
ATOM 5 O5' U A 547 -10.625 114.524 104.170 1.00 73.37 O
ATOM 6 C5' U A 547 -11.638 115.242 103.456 1.00 73.25 C
ATOM 7 C4' U A 547 -13.017 114.921 103.965 1.00 71.98 C
ATOM 8 O4' U A 547 -13.949 115.643 103.111 1.00 73.49 O
ATOM 9 C3' U A 547 -13.432 113.458 103.881 1.00 71.43 C
ATOM 10 O3' U A 547 -13.200 112.773 105.109 1.00 68.10 O
ATOM 11 C2' U A 547 -14.904 113.543 103.502 1.00 72.72 C
ATOM 12 O2' U A 547 -15.739 113.843 104.600 1.00 72.85 O
ATOM 13 C1' U A 547 -14.888 114.743 102.555 1.00 74.03 C
ATOM 14 N1 U A 547 -14.472 114.419 101.178 1.00 74.84 N
ATOM 15 C2 U A 547 -15.463 114.260 100.226 1.00 77.01 C
ATOM 16 O2 U A 547 -16.650 114.395 100.475 1.00 79.91 O
ATOM 17 N3 U A 547 -15.015 113.934 98.968 1.00 78.20 N
ATOM 18 C4 U A 547 -13.705 113.761 98.569 1.00 77.65 C
ATOM 19 O4 U A 547 -13.460 113.461 97.398 1.00 77.66 O
ATOM 20 C5 U A 547 -12.739 113.957 99.603 1.00 77.05 C
ATOM 21 C6 U A 547 -13.143 114.270 100.837 1.00 75.81 C
ATOM 22 P C A 548 -13.012 111.175 105.114 1.00 67.36 P
ATOM 23 OP1 C A 548 -13.257 110.736 106.507 1.00 68.59 O
ATOM 24 OP2 C A 548 -11.723 110.830 104.460 1.00 68.20 O
ATOM 25 O5' C A 548 -14.204 110.624 104.204 1.00 65.45 O
TER
ATOM 1 O3' A B 585 -17.460 109.922 88.132 1.00 65.19 O
ATOM 2 P C B 586 -17.753 111.502 88.242 1.00 66.81 P
ATOM 3 OP1 C B 586 -18.659 111.844 87.117 1.00 67.64 O
ATOM 4 OP2 C B 586 -16.470 112.229 88.393 1.00 67.00 O
ATOM 5 O5' C B 586 -18.555 111.653 89.611 1.00 67.92 O
ATOM 6 C5' C B 586 -19.835 111.009 89.794 1.00 68.24 C
ATOM 7 C4' C B 586 -20.346 111.227 91.201 1.00 69.11 C
ATOM 8 O4' C B 586 -19.506 110.529 92.159 1.00 69.19 O
ATOM 9 C3' C B 586 -20.340 112.660 91.696 1.00 70.29 C
ATOM 10 O3' C B 586 -21.440 113.412 91.198 1.00 70.38 O
ATOM 11 C2' C B 586 -20.375 112.483 93.209 1.00 70.80 C
ATOM 12 O2' C B 586 -21.668 112.221 93.716 1.00 71.02 O
ATOM 13 C1' C B 586 -19.490 111.245 93.384 1.00 70.94 C
ATOM 14 N1 C B 586 -18.094 111.572 93.733 1.00 73.71 N
ATOM 15 C2 C B 586 -17.735 111.636 95.091 1.00 75.80 C
ATOM 16 O2 C B 586 -18.593 111.397 95.959 1.00 78.86 O
ATOM 17 N3 C B 586 -16.464 111.954 95.423 1.00 76.03 N
ATOM 18 C4 C B 586 -15.565 112.195 94.468 1.00 74.69 C
ATOM 19 N4 C B 586 -14.325 112.505 94.848 1.00 74.39 N
ATOM 20 C5 C B 586 -15.899 112.130 93.084 1.00 74.17 C
ATOM 21 C6 C B 586 -17.161 111.819 92.764 1.00 73.72 C
ATOM 22 P G B 587 -21.247 114.972 90.885 1.00 71.40 P
ATOM 23 OP1 G B 587 -22.529 115.519 90.374 1.00 73.14 O
ATOM 24 OP2 G B 587 -20.018 115.117 90.066 1.00 72.61 O
ATOM 25 O5' G B 587 -20.980 115.608 92.320 1.00 69.82 O
TER
Atoms:
C4: (-13.705,113.761,98.569)
N3: (-15.015,113.934,98.968)
OP1: (-8.239,114.028,104.696)
OP2: (-9.144,113.821,102.308)
C2: (-15.463,114.260,100.226)
C1': (-14.888,114.743,102.555)
C3': (-13.432,113.458,103.881)
O5': (-10.625,114.524,104.170)
O4': (-13.949,115.643,103.111)
C5': (-11.638,115.242,103.456)
P: (-9.129,114.520,103.619)
C4': (-13.017,114.921,103.965)
C2': (-14.904,113.543,103.502)
O2': (-15.739,113.843,104.600)
N1: (-14.472,114.419,101.178)
O4: (-13.460,113.461,97.398)
O2: (-16.650,114.395,100.475)
C6: (-13.143,114.270,100.837)
C5: (-12.739,113.957,99.603)
O3': (-13.200,112.773,105.109)
N3: (-15.015,113.934,98.968)
OP1: (-8.239,114.028,104.696)
OP2: (-9.144,113.821,102.308)
C2: (-15.463,114.260,100.226)
C1': (-14.888,114.743,102.555)
C3': (-13.432,113.458,103.881)
O5': (-10.625,114.524,104.170)
O4': (-13.949,115.643,103.111)
C5': (-11.638,115.242,103.456)
P: (-9.129,114.520,103.619)
C4': (-13.017,114.921,103.965)
C2': (-14.904,113.543,103.502)
O2': (-15.739,113.843,104.600)
N1: (-14.472,114.419,101.178)
O4: (-13.460,113.461,97.398)
O2: (-16.650,114.395,100.475)
C6: (-13.143,114.270,100.837)
C5: (-12.739,113.957,99.603)
O3': (-13.200,112.773,105.109)
C2: (-17.735,111.636,95.091)
OP1: (-18.659,111.844,87.117)
OP2: (-16.470,112.229,88.393)
C4: (-15.565,112.195,94.468)
O5': (-18.555,111.653,89.611)
C3': (-20.340,112.660,91.696)
C1': (-19.490,111.245,93.384)
O4': (-19.506,110.529,92.159)
C5': (-19.835,111.009,89.794)
P: (-17.753,111.502,88.242)
O2: (-18.593,111.397,95.959)
C4': (-20.346,111.227,91.201)
C2': (-20.375,112.483,93.209)
O2': (-21.668,112.221,93.716)
N1: (-18.094,111.572,93.733)
N3: (-16.464,111.954,95.423)
N4: (-14.325,112.505,94.848)
C6: (-17.161,111.819,92.764)
C5: (-15.899,112.130,93.084)
O3': (-21.440,113.412,91.198)
OP1: (-18.659,111.844,87.117)
OP2: (-16.470,112.229,88.393)
C4: (-15.565,112.195,94.468)
O5': (-18.555,111.653,89.611)
C3': (-20.340,112.660,91.696)
C1': (-19.490,111.245,93.384)
O4': (-19.506,110.529,92.159)
C5': (-19.835,111.009,89.794)
P: (-17.753,111.502,88.242)
O2: (-18.593,111.397,95.959)
C4': (-20.346,111.227,91.201)
C2': (-20.375,112.483,93.209)
O2': (-21.668,112.221,93.716)
N1: (-18.094,111.572,93.733)
N3: (-16.464,111.954,95.423)
N4: (-14.325,112.505,94.848)
C6: (-17.161,111.819,92.764)
C5: (-15.899,112.130,93.084)
O3': (-21.440,113.412,91.198)
Image (generated by PyMOL):