Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0547:0586
Extra
PDB:
ATOM 1 O3' C A 546 -8.858 115.835 103.119 1.00 73.55 O
ATOM 2 P U A 547 -9.267 114.296 103.382 1.00 74.33 P
ATOM 3 OP1 U A 547 -8.386 113.750 104.442 1.00 74.41 O
ATOM 4 OP2 U A 547 -9.350 113.601 102.073 1.00 72.93 O
ATOM 5 O5' U A 547 -10.750 114.381 103.963 1.00 75.14 O
ATOM 6 C5' U A 547 -11.758 115.096 103.242 1.00 75.38 C
ATOM 7 C4' U A 547 -13.138 114.776 103.751 1.00 75.71 C
ATOM 8 O4' U A 547 -14.078 115.505 102.913 1.00 77.26 O
ATOM 9 C3' U A 547 -13.554 113.313 103.655 1.00 75.48 C
ATOM 10 O3' U A 547 -13.308 112.604 104.865 1.00 72.96 O
ATOM 11 C2' U A 547 -15.032 113.402 103.301 1.00 76.42 C
ATOM 12 O2' U A 547 -15.846 113.676 104.423 1.00 76.20 O
ATOM 13 C1' U A 547 -15.029 114.611 102.365 1.00 77.87 C
ATOM 14 N1 U A 547 -14.634 114.296 100.979 1.00 78.28 N
ATOM 15 C2 U A 547 -15.641 114.112 100.046 1.00 80.15 C
ATOM 16 O2 U A 547 -16.828 114.222 100.315 1.00 82.68 O
ATOM 17 N3 U A 547 -15.209 113.795 98.780 1.00 80.99 N
ATOM 18 C4 U A 547 -13.902 113.648 98.358 1.00 80.50 C
ATOM 19 O4 U A 547 -13.671 113.346 97.184 1.00 80.02 O
ATOM 20 C5 U A 547 -12.922 113.871 99.373 1.00 79.73 C
ATOM 21 C6 U A 547 -13.310 114.177 100.614 1.00 78.77 C
ATOM 22 P C A 548 -13.128 111.006 104.833 1.00 72.44 P
ATOM 23 OP1 C A 548 -13.369 110.524 106.214 1.00 73.24 O
ATOM 24 OP2 C A 548 -11.841 110.684 104.165 1.00 73.06 O
ATOM 25 O5' C A 548 -14.321 110.488 103.908 1.00 71.13 O
TER
ATOM 1 O3' A B 585 -17.496 109.796 87.849 1.00 68.32 O
ATOM 2 P C B 586 -17.768 111.378 87.943 1.00 69.94 P
ATOM 3 OP1 C B 586 -18.637 111.723 86.789 1.00 70.16 O
ATOM 4 OP2 C B 586 -16.485 112.096 88.129 1.00 70.18 O
ATOM 5 O5' C B 586 -18.600 111.543 89.292 1.00 71.56 O
ATOM 6 C5' C B 586 -19.878 110.899 89.456 1.00 73.36 C
ATOM 7 C4' C B 586 -20.394 111.090 90.866 1.00 75.01 C
ATOM 8 O4' C B 586 -19.565 110.369 91.815 1.00 75.77 O
ATOM 9 C3' C B 586 -20.385 112.514 91.389 1.00 76.11 C
ATOM 10 O3' C B 586 -21.485 113.265 90.899 1.00 75.75 O
ATOM 11 C2' C B 586 -20.437 112.303 92.898 1.00 77.26 C
ATOM 12 O2' C B 586 -21.737 112.028 93.382 1.00 77.93 O
ATOM 13 C1' C B 586 -19.561 111.057 93.057 1.00 77.53 C
ATOM 14 N1 C B 586 -18.170 111.366 93.433 1.00 79.83 N
ATOM 15 C2 C B 586 -17.826 111.383 94.795 1.00 81.74 C
ATOM 16 O2 C B 586 -18.698 111.122 95.646 1.00 84.01 O
ATOM 17 N3 C B 586 -16.555 111.680 95.151 1.00 82.01 N
ATOM 18 C4 C B 586 -15.643 111.947 94.214 1.00 81.41 C
ATOM 19 N4 C B 586 -14.404 112.235 94.616 1.00 81.05 N
ATOM 20 C5 C B 586 -15.962 111.930 92.825 1.00 81.28 C
ATOM 21 C6 C B 586 -17.224 111.638 92.482 1.00 80.74 C
ATOM 22 P G B 587 -21.303 114.830 90.607 1.00 76.03 P
ATOM 23 OP1 G B 587 -22.594 115.344 90.090 1.00 78.71 O
ATOM 24 OP2 G B 587 -20.073 115.015 89.804 1.00 77.53 O
ATOM 25 O5' G B 587 -21.065 115.453 92.050 1.00 74.82 O
TER
ATOM 2 P U A 547 -9.267 114.296 103.382 1.00 74.33 P
ATOM 3 OP1 U A 547 -8.386 113.750 104.442 1.00 74.41 O
ATOM 4 OP2 U A 547 -9.350 113.601 102.073 1.00 72.93 O
ATOM 5 O5' U A 547 -10.750 114.381 103.963 1.00 75.14 O
ATOM 6 C5' U A 547 -11.758 115.096 103.242 1.00 75.38 C
ATOM 7 C4' U A 547 -13.138 114.776 103.751 1.00 75.71 C
ATOM 8 O4' U A 547 -14.078 115.505 102.913 1.00 77.26 O
ATOM 9 C3' U A 547 -13.554 113.313 103.655 1.00 75.48 C
ATOM 10 O3' U A 547 -13.308 112.604 104.865 1.00 72.96 O
ATOM 11 C2' U A 547 -15.032 113.402 103.301 1.00 76.42 C
ATOM 12 O2' U A 547 -15.846 113.676 104.423 1.00 76.20 O
ATOM 13 C1' U A 547 -15.029 114.611 102.365 1.00 77.87 C
ATOM 14 N1 U A 547 -14.634 114.296 100.979 1.00 78.28 N
ATOM 15 C2 U A 547 -15.641 114.112 100.046 1.00 80.15 C
ATOM 16 O2 U A 547 -16.828 114.222 100.315 1.00 82.68 O
ATOM 17 N3 U A 547 -15.209 113.795 98.780 1.00 80.99 N
ATOM 18 C4 U A 547 -13.902 113.648 98.358 1.00 80.50 C
ATOM 19 O4 U A 547 -13.671 113.346 97.184 1.00 80.02 O
ATOM 20 C5 U A 547 -12.922 113.871 99.373 1.00 79.73 C
ATOM 21 C6 U A 547 -13.310 114.177 100.614 1.00 78.77 C
ATOM 22 P C A 548 -13.128 111.006 104.833 1.00 72.44 P
ATOM 23 OP1 C A 548 -13.369 110.524 106.214 1.00 73.24 O
ATOM 24 OP2 C A 548 -11.841 110.684 104.165 1.00 73.06 O
ATOM 25 O5' C A 548 -14.321 110.488 103.908 1.00 71.13 O
TER
ATOM 1 O3' A B 585 -17.496 109.796 87.849 1.00 68.32 O
ATOM 2 P C B 586 -17.768 111.378 87.943 1.00 69.94 P
ATOM 3 OP1 C B 586 -18.637 111.723 86.789 1.00 70.16 O
ATOM 4 OP2 C B 586 -16.485 112.096 88.129 1.00 70.18 O
ATOM 5 O5' C B 586 -18.600 111.543 89.292 1.00 71.56 O
ATOM 6 C5' C B 586 -19.878 110.899 89.456 1.00 73.36 C
ATOM 7 C4' C B 586 -20.394 111.090 90.866 1.00 75.01 C
ATOM 8 O4' C B 586 -19.565 110.369 91.815 1.00 75.77 O
ATOM 9 C3' C B 586 -20.385 112.514 91.389 1.00 76.11 C
ATOM 10 O3' C B 586 -21.485 113.265 90.899 1.00 75.75 O
ATOM 11 C2' C B 586 -20.437 112.303 92.898 1.00 77.26 C
ATOM 12 O2' C B 586 -21.737 112.028 93.382 1.00 77.93 O
ATOM 13 C1' C B 586 -19.561 111.057 93.057 1.00 77.53 C
ATOM 14 N1 C B 586 -18.170 111.366 93.433 1.00 79.83 N
ATOM 15 C2 C B 586 -17.826 111.383 94.795 1.00 81.74 C
ATOM 16 O2 C B 586 -18.698 111.122 95.646 1.00 84.01 O
ATOM 17 N3 C B 586 -16.555 111.680 95.151 1.00 82.01 N
ATOM 18 C4 C B 586 -15.643 111.947 94.214 1.00 81.41 C
ATOM 19 N4 C B 586 -14.404 112.235 94.616 1.00 81.05 N
ATOM 20 C5 C B 586 -15.962 111.930 92.825 1.00 81.28 C
ATOM 21 C6 C B 586 -17.224 111.638 92.482 1.00 80.74 C
ATOM 22 P G B 587 -21.303 114.830 90.607 1.00 76.03 P
ATOM 23 OP1 G B 587 -22.594 115.344 90.090 1.00 78.71 O
ATOM 24 OP2 G B 587 -20.073 115.015 89.804 1.00 77.53 O
ATOM 25 O5' G B 587 -21.065 115.453 92.050 1.00 74.82 O
TER
Atoms:
C4: (-13.902,113.648,98.358)
N3: (-15.209,113.795,98.780)
OP1: (-8.386,113.750,104.442)
OP2: (-9.350,113.601,102.073)
C2: (-15.641,114.112,100.046)
C1': (-15.029,114.611,102.365)
C3': (-13.554,113.313,103.655)
O5': (-10.750,114.381,103.963)
O4': (-14.078,115.505,102.913)
C5': (-11.758,115.096,103.242)
P: (-9.267,114.296,103.382)
C4': (-13.138,114.776,103.751)
C2': (-15.032,113.402,103.301)
O2': (-15.846,113.676,104.423)
N1: (-14.634,114.296,100.979)
O4: (-13.671,113.346,97.184)
O2: (-16.828,114.222,100.315)
C6: (-13.310,114.177,100.614)
C5: (-12.922,113.871,99.373)
O3': (-13.308,112.604,104.865)
N3: (-15.209,113.795,98.780)
OP1: (-8.386,113.750,104.442)
OP2: (-9.350,113.601,102.073)
C2: (-15.641,114.112,100.046)
C1': (-15.029,114.611,102.365)
C3': (-13.554,113.313,103.655)
O5': (-10.750,114.381,103.963)
O4': (-14.078,115.505,102.913)
C5': (-11.758,115.096,103.242)
P: (-9.267,114.296,103.382)
C4': (-13.138,114.776,103.751)
C2': (-15.032,113.402,103.301)
O2': (-15.846,113.676,104.423)
N1: (-14.634,114.296,100.979)
O4: (-13.671,113.346,97.184)
O2: (-16.828,114.222,100.315)
C6: (-13.310,114.177,100.614)
C5: (-12.922,113.871,99.373)
O3': (-13.308,112.604,104.865)
C2: (-17.826,111.383,94.795)
OP1: (-18.637,111.723,86.789)
OP2: (-16.485,112.096,88.129)
C4: (-15.643,111.947,94.214)
O5': (-18.600,111.543,89.292)
C3': (-20.385,112.514,91.389)
C1': (-19.561,111.057,93.057)
O4': (-19.565,110.369,91.815)
C5': (-19.878,110.899,89.456)
P: (-17.768,111.378,87.943)
O2: (-18.698,111.122,95.646)
C4': (-20.394,111.090,90.866)
C2': (-20.437,112.303,92.898)
O2': (-21.737,112.028,93.382)
N1: (-18.170,111.366,93.433)
N3: (-16.555,111.680,95.151)
N4: (-14.404,112.235,94.616)
C6: (-17.224,111.638,92.482)
C5: (-15.962,111.930,92.825)
O3': (-21.485,113.265,90.899)
OP1: (-18.637,111.723,86.789)
OP2: (-16.485,112.096,88.129)
C4: (-15.643,111.947,94.214)
O5': (-18.600,111.543,89.292)
C3': (-20.385,112.514,91.389)
C1': (-19.561,111.057,93.057)
O4': (-19.565,110.369,91.815)
C5': (-19.878,110.899,89.456)
P: (-17.768,111.378,87.943)
O2: (-18.698,111.122,95.646)
C4': (-20.394,111.090,90.866)
C2': (-20.437,112.303,92.898)
O2': (-21.737,112.028,93.382)
N1: (-18.170,111.366,93.433)
N3: (-16.555,111.680,95.151)
N4: (-14.404,112.235,94.616)
C6: (-17.224,111.638,92.482)
C5: (-15.962,111.930,92.825)
O3': (-21.485,113.265,90.899)
Image (generated by PyMOL):