Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:954:926
Extra
PDB:
ATOM 1 O3' A A 53 68.955 5.700 111.765 1.00 86.85 O
ATOM 2 P U A 54 67.384 5.544 112.093 1.00 86.40 P
ATOM 3 OP1 U A 54 67.291 5.060 113.492 1.00 86.39 O
ATOM 4 OP2 U A 54 66.709 4.791 111.001 1.00 85.45 O
ATOM 5 O5' U A 54 66.848 7.043 112.078 1.00 87.13 O
ATOM 6 C5' U A 54 67.663 8.091 112.625 1.00 87.06 C
ATOM 7 C4' U A 54 67.149 9.445 112.211 1.00 85.36 C
ATOM 8 O4' U A 54 67.116 9.532 110.758 1.00 84.11 O
ATOM 9 C3' U A 54 65.750 9.808 112.698 1.00 84.37 C
ATOM 10 O3' U A 54 65.792 11.116 113.242 1.00 84.28 O
ATOM 11 C2' U A 54 64.906 9.742 111.424 1.00 84.09 C
ATOM 12 O2' U A 54 63.805 10.630 111.430 1.00 85.13 O
ATOM 13 C1' U A 54 65.918 10.160 110.365 1.00 83.31 C
ATOM 14 N1 U A 54 65.587 9.741 108.992 1.00 81.22 N
ATOM 15 C2 U A 54 65.533 10.726 108.019 1.00 79.92 C
ATOM 16 O2 U A 54 65.745 11.906 108.251 1.00 78.80 O
ATOM 17 N3 U A 54 65.217 10.282 106.760 1.00 79.25 N
ATOM 18 C4 U A 54 64.945 8.989 106.379 1.00 79.82 C
ATOM 19 O4 U A 54 64.664 8.752 105.200 1.00 78.71 O
ATOM 20 C5 U A 54 65.023 8.028 107.437 1.00 79.99 C
ATOM 21 C6 U A 54 65.337 8.426 108.675 1.00 80.51 C
ATOM 22 P A A 55 66.255 11.319 114.772 1.00 85.61 P
ATOM 23 OP1 A A 55 66.411 9.971 115.383 1.00 86.58 O
ATOM 24 OP2 A A 55 65.379 12.325 115.428 1.00 85.90 O
ATOM 25 O5' A A 55 67.719 11.930 114.646 1.00 83.79 O
TER
ATOM 1 O3' C B 25 60.778 11.167 95.504 1.00 75.71 O
ATOM 2 P C B 26 62.346 11.509 95.380 1.00 74.08 P
ATOM 3 OP1 C B 26 62.568 12.104 94.028 1.00 73.45 O
ATOM 4 OP2 C B 26 63.128 10.318 95.794 1.00 75.70 O
ATOM 5 O5' C B 26 62.564 12.628 96.489 1.00 70.34 O
ATOM 6 C5' C B 26 61.947 13.914 96.354 1.00 68.04 C
ATOM 7 C4' C B 26 62.337 14.803 97.502 1.00 66.80 C
ATOM 8 O4' C B 26 61.734 14.321 98.732 1.00 67.08 O
ATOM 9 C3' C B 26 63.817 14.821 97.817 1.00 66.41 C
ATOM 10 O3' C B 26 64.560 15.624 96.916 1.00 66.24 O
ATOM 11 C2' C B 26 63.827 15.311 99.258 1.00 66.26 C
ATOM 12 O2' C B 26 63.619 16.701 99.386 1.00 65.07 O
ATOM 13 C1' C B 26 62.614 14.568 99.821 1.00 67.31 C
ATOM 14 N1 C B 26 62.985 13.278 100.439 1.00 67.48 N
ATOM 15 C2 C B 26 63.490 13.279 101.747 1.00 69.14 C
ATOM 16 O2 C B 26 63.605 14.365 102.354 1.00 70.65 O
ATOM 17 N3 C B 26 63.841 12.106 102.318 1.00 68.65 N
ATOM 18 C4 C B 26 63.707 10.967 101.640 1.00 69.15 C
ATOM 19 N4 C B 26 64.070 9.837 102.248 1.00 71.24 N
ATOM 20 C5 C B 26 63.196 10.935 100.311 1.00 67.73 C
ATOM 21 C6 C B 26 62.849 12.101 99.755 1.00 67.73 C
ATOM 22 P U B 27 66.157 15.466 96.859 1.00 66.05 P
ATOM 23 OP1 U B 27 66.665 16.316 95.753 1.00 65.20 O
ATOM 24 OP2 U B 27 66.487 14.018 96.879 1.00 65.34 O
ATOM 25 O5' U B 27 66.605 16.105 98.244 1.00 63.58 O
TER
ATOM 2 P U A 54 67.384 5.544 112.093 1.00 86.40 P
ATOM 3 OP1 U A 54 67.291 5.060 113.492 1.00 86.39 O
ATOM 4 OP2 U A 54 66.709 4.791 111.001 1.00 85.45 O
ATOM 5 O5' U A 54 66.848 7.043 112.078 1.00 87.13 O
ATOM 6 C5' U A 54 67.663 8.091 112.625 1.00 87.06 C
ATOM 7 C4' U A 54 67.149 9.445 112.211 1.00 85.36 C
ATOM 8 O4' U A 54 67.116 9.532 110.758 1.00 84.11 O
ATOM 9 C3' U A 54 65.750 9.808 112.698 1.00 84.37 C
ATOM 10 O3' U A 54 65.792 11.116 113.242 1.00 84.28 O
ATOM 11 C2' U A 54 64.906 9.742 111.424 1.00 84.09 C
ATOM 12 O2' U A 54 63.805 10.630 111.430 1.00 85.13 O
ATOM 13 C1' U A 54 65.918 10.160 110.365 1.00 83.31 C
ATOM 14 N1 U A 54 65.587 9.741 108.992 1.00 81.22 N
ATOM 15 C2 U A 54 65.533 10.726 108.019 1.00 79.92 C
ATOM 16 O2 U A 54 65.745 11.906 108.251 1.00 78.80 O
ATOM 17 N3 U A 54 65.217 10.282 106.760 1.00 79.25 N
ATOM 18 C4 U A 54 64.945 8.989 106.379 1.00 79.82 C
ATOM 19 O4 U A 54 64.664 8.752 105.200 1.00 78.71 O
ATOM 20 C5 U A 54 65.023 8.028 107.437 1.00 79.99 C
ATOM 21 C6 U A 54 65.337 8.426 108.675 1.00 80.51 C
ATOM 22 P A A 55 66.255 11.319 114.772 1.00 85.61 P
ATOM 23 OP1 A A 55 66.411 9.971 115.383 1.00 86.58 O
ATOM 24 OP2 A A 55 65.379 12.325 115.428 1.00 85.90 O
ATOM 25 O5' A A 55 67.719 11.930 114.646 1.00 83.79 O
TER
ATOM 1 O3' C B 25 60.778 11.167 95.504 1.00 75.71 O
ATOM 2 P C B 26 62.346 11.509 95.380 1.00 74.08 P
ATOM 3 OP1 C B 26 62.568 12.104 94.028 1.00 73.45 O
ATOM 4 OP2 C B 26 63.128 10.318 95.794 1.00 75.70 O
ATOM 5 O5' C B 26 62.564 12.628 96.489 1.00 70.34 O
ATOM 6 C5' C B 26 61.947 13.914 96.354 1.00 68.04 C
ATOM 7 C4' C B 26 62.337 14.803 97.502 1.00 66.80 C
ATOM 8 O4' C B 26 61.734 14.321 98.732 1.00 67.08 O
ATOM 9 C3' C B 26 63.817 14.821 97.817 1.00 66.41 C
ATOM 10 O3' C B 26 64.560 15.624 96.916 1.00 66.24 O
ATOM 11 C2' C B 26 63.827 15.311 99.258 1.00 66.26 C
ATOM 12 O2' C B 26 63.619 16.701 99.386 1.00 65.07 O
ATOM 13 C1' C B 26 62.614 14.568 99.821 1.00 67.31 C
ATOM 14 N1 C B 26 62.985 13.278 100.439 1.00 67.48 N
ATOM 15 C2 C B 26 63.490 13.279 101.747 1.00 69.14 C
ATOM 16 O2 C B 26 63.605 14.365 102.354 1.00 70.65 O
ATOM 17 N3 C B 26 63.841 12.106 102.318 1.00 68.65 N
ATOM 18 C4 C B 26 63.707 10.967 101.640 1.00 69.15 C
ATOM 19 N4 C B 26 64.070 9.837 102.248 1.00 71.24 N
ATOM 20 C5 C B 26 63.196 10.935 100.311 1.00 67.73 C
ATOM 21 C6 C B 26 62.849 12.101 99.755 1.00 67.73 C
ATOM 22 P U B 27 66.157 15.466 96.859 1.00 66.05 P
ATOM 23 OP1 U B 27 66.665 16.316 95.753 1.00 65.20 O
ATOM 24 OP2 U B 27 66.487 14.018 96.879 1.00 65.34 O
ATOM 25 O5' U B 27 66.605 16.105 98.244 1.00 63.58 O
TER
Atoms:
C4: (64.945,8.989,106.379)
N3: (65.217,10.282,106.760)
OP1: (67.291,5.060,113.492)
OP2: (66.709,4.791,111.001)
C2: (65.533,10.726,108.019)
C1': (65.918,10.160,110.365)
C3': (65.750,9.808,112.698)
O5': (66.848,7.043,112.078)
O4': (67.116,9.532,110.758)
C5': (67.663,8.091,112.625)
P: (67.384,5.544,112.093)
C4': (67.149,9.445,112.211)
C2': (64.906,9.742,111.424)
O2': (63.805,10.630,111.430)
N1: (65.587,9.741,108.992)
O4: (64.664,8.752,105.200)
O2: (65.745,11.906,108.251)
C6: (65.337,8.426,108.675)
C5: (65.023,8.028,107.437)
O3': (65.792,11.116,113.242)
N3: (65.217,10.282,106.760)
OP1: (67.291,5.060,113.492)
OP2: (66.709,4.791,111.001)
C2: (65.533,10.726,108.019)
C1': (65.918,10.160,110.365)
C3': (65.750,9.808,112.698)
O5': (66.848,7.043,112.078)
O4': (67.116,9.532,110.758)
C5': (67.663,8.091,112.625)
P: (67.384,5.544,112.093)
C4': (67.149,9.445,112.211)
C2': (64.906,9.742,111.424)
O2': (63.805,10.630,111.430)
N1: (65.587,9.741,108.992)
O4: (64.664,8.752,105.200)
O2: (65.745,11.906,108.251)
C6: (65.337,8.426,108.675)
C5: (65.023,8.028,107.437)
O3': (65.792,11.116,113.242)
C2: (63.490,13.279,101.747)
OP1: (62.568,12.104,94.028)
OP2: (63.128,10.318,95.794)
C4: (63.707,10.967,101.640)
O5': (62.564,12.628,96.489)
C3': (63.817,14.821,97.817)
C1': (62.614,14.568,99.821)
O4': (61.734,14.321,98.732)
C5': (61.947,13.914,96.354)
P: (62.346,11.509,95.380)
O2: (63.605,14.365,102.354)
C4': (62.337,14.803,97.502)
C2': (63.827,15.311,99.258)
O2': (63.619,16.701,99.386)
N1: (62.985,13.278,100.439)
N3: (63.841,12.106,102.318)
N4: (64.070,9.837,102.248)
C6: (62.849,12.101,99.755)
C5: (63.196,10.935,100.311)
O3': (64.560,15.624,96.916)
OP1: (62.568,12.104,94.028)
OP2: (63.128,10.318,95.794)
C4: (63.707,10.967,101.640)
O5': (62.564,12.628,96.489)
C3': (63.817,14.821,97.817)
C1': (62.614,14.568,99.821)
O4': (61.734,14.321,98.732)
C5': (61.947,13.914,96.354)
P: (62.346,11.509,95.380)
O2: (63.605,14.365,102.354)
C4': (62.337,14.803,97.502)
C2': (63.827,15.311,99.258)
O2': (63.619,16.701,99.386)
N1: (62.985,13.278,100.439)
N3: (63.841,12.106,102.318)
N4: (64.070,9.837,102.248)
C6: (62.849,12.101,99.755)
C5: (63.196,10.935,100.311)
O3': (64.560,15.624,96.916)
Image (generated by PyMOL):