Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0547:0586
Extra
PDB:
ATOM 1 O3' C A 546 -8.679 116.485 103.322 1.00 71.73 O
ATOM 2 P U A 547 -9.024 114.930 103.580 1.00 73.50 P
ATOM 3 OP1 U A 547 -8.151 114.439 104.671 1.00 73.66 O
ATOM 4 OP2 U A 547 -9.029 114.224 102.275 1.00 72.68 O
ATOM 5 O5' U A 547 -10.529 114.946 104.110 1.00 74.11 O
ATOM 6 C5' U A 547 -11.531 115.655 103.371 1.00 74.07 C
ATOM 7 C4' U A 547 -12.915 115.393 103.903 1.00 72.78 C
ATOM 8 O4' U A 547 -13.826 116.148 103.057 1.00 74.53 O
ATOM 9 C3' U A 547 -13.396 113.948 103.834 1.00 72.63 C
ATOM 10 O3' U A 547 -13.204 113.263 105.067 1.00 68.93 O
ATOM 11 C2' U A 547 -14.866 114.091 103.464 1.00 73.63 C
ATOM 12 O2' U A 547 -15.675 114.427 104.572 1.00 73.56 O
ATOM 13 C1' U A 547 -14.805 115.285 102.512 1.00 75.27 C
ATOM 14 N1 U A 547 -14.415 114.945 101.131 1.00 76.57 N
ATOM 15 C2 U A 547 -15.425 114.782 100.199 1.00 78.51 C
ATOM 16 O2 U A 547 -16.609 114.921 100.469 1.00 81.27 O
ATOM 17 N3 U A 547 -15.000 114.451 98.934 1.00 78.73 N
ATOM 18 C4 U A 547 -13.697 114.276 98.511 1.00 78.44 C
ATOM 19 O4 U A 547 -13.473 113.975 97.335 1.00 77.48 O
ATOM 20 C5 U A 547 -12.712 114.473 99.527 1.00 78.08 C
ATOM 21 C6 U A 547 -13.093 114.789 100.768 1.00 77.11 C
ATOM 22 P C A 548 -13.002 111.669 105.071 1.00 67.58 P
ATOM 23 OP1 C A 548 -13.249 111.212 106.458 1.00 68.31 O
ATOM 24 OP2 C A 548 -11.703 111.363 104.422 1.00 68.22 O
ATOM 25 O5' C A 548 -14.177 111.110 104.149 1.00 65.81 O
TER
ATOM 1 O3' A B 585 -17.327 110.288 88.106 1.00 63.07 O
ATOM 2 P C B 586 -17.609 111.870 88.201 1.00 64.94 P
ATOM 3 OP1 C B 586 -18.502 112.210 87.063 1.00 65.45 O
ATOM 4 OP2 C B 586 -16.327 112.592 88.363 1.00 65.29 O
ATOM 5 O5' C B 586 -18.428 112.037 89.559 1.00 66.87 O
ATOM 6 C5' C B 586 -19.737 111.448 89.707 1.00 67.38 C
ATOM 7 C4' C B 586 -20.263 111.660 91.108 1.00 68.15 C
ATOM 8 O4' C B 586 -19.442 110.942 92.068 1.00 68.34 O
ATOM 9 C3' C B 586 -20.245 113.089 91.618 1.00 69.55 C
ATOM 10 O3' C B 586 -21.340 113.851 91.125 1.00 69.87 O
ATOM 11 C2' C B 586 -20.305 112.891 93.127 1.00 70.33 C
ATOM 12 O2' C B 586 -21.610 112.629 93.603 1.00 71.32 O
ATOM 13 C1' C B 586 -19.432 111.645 93.301 1.00 70.00 C
ATOM 14 N1 C B 586 -18.039 111.972 93.662 1.00 72.27 N
ATOM 15 C2 C B 586 -17.705 112.093 95.022 1.00 73.70 C
ATOM 16 O2 C B 586 -18.577 111.888 95.882 1.00 76.49 O
ATOM 17 N3 C B 586 -16.442 112.427 95.363 1.00 73.66 N
ATOM 18 C4 C B 586 -15.525 112.630 94.416 1.00 73.15 C
ATOM 19 N4 C B 586 -14.295 112.969 94.806 1.00 72.80 N
ATOM 20 C5 C B 586 -15.829 112.497 93.030 1.00 72.45 C
ATOM 21 C6 C B 586 -17.085 112.171 92.700 1.00 72.69 C
ATOM 22 P G B 587 -21.147 115.420 90.845 1.00 71.03 P
ATOM 23 OP1 G B 587 -22.435 115.950 90.334 1.00 72.38 O
ATOM 24 OP2 G B 587 -19.917 115.595 90.036 1.00 72.06 O
ATOM 25 O5' G B 587 -20.889 116.030 92.291 1.00 68.53 O
TER
ATOM 2 P U A 547 -9.024 114.930 103.580 1.00 73.50 P
ATOM 3 OP1 U A 547 -8.151 114.439 104.671 1.00 73.66 O
ATOM 4 OP2 U A 547 -9.029 114.224 102.275 1.00 72.68 O
ATOM 5 O5' U A 547 -10.529 114.946 104.110 1.00 74.11 O
ATOM 6 C5' U A 547 -11.531 115.655 103.371 1.00 74.07 C
ATOM 7 C4' U A 547 -12.915 115.393 103.903 1.00 72.78 C
ATOM 8 O4' U A 547 -13.826 116.148 103.057 1.00 74.53 O
ATOM 9 C3' U A 547 -13.396 113.948 103.834 1.00 72.63 C
ATOM 10 O3' U A 547 -13.204 113.263 105.067 1.00 68.93 O
ATOM 11 C2' U A 547 -14.866 114.091 103.464 1.00 73.63 C
ATOM 12 O2' U A 547 -15.675 114.427 104.572 1.00 73.56 O
ATOM 13 C1' U A 547 -14.805 115.285 102.512 1.00 75.27 C
ATOM 14 N1 U A 547 -14.415 114.945 101.131 1.00 76.57 N
ATOM 15 C2 U A 547 -15.425 114.782 100.199 1.00 78.51 C
ATOM 16 O2 U A 547 -16.609 114.921 100.469 1.00 81.27 O
ATOM 17 N3 U A 547 -15.000 114.451 98.934 1.00 78.73 N
ATOM 18 C4 U A 547 -13.697 114.276 98.511 1.00 78.44 C
ATOM 19 O4 U A 547 -13.473 113.975 97.335 1.00 77.48 O
ATOM 20 C5 U A 547 -12.712 114.473 99.527 1.00 78.08 C
ATOM 21 C6 U A 547 -13.093 114.789 100.768 1.00 77.11 C
ATOM 22 P C A 548 -13.002 111.669 105.071 1.00 67.58 P
ATOM 23 OP1 C A 548 -13.249 111.212 106.458 1.00 68.31 O
ATOM 24 OP2 C A 548 -11.703 111.363 104.422 1.00 68.22 O
ATOM 25 O5' C A 548 -14.177 111.110 104.149 1.00 65.81 O
TER
ATOM 1 O3' A B 585 -17.327 110.288 88.106 1.00 63.07 O
ATOM 2 P C B 586 -17.609 111.870 88.201 1.00 64.94 P
ATOM 3 OP1 C B 586 -18.502 112.210 87.063 1.00 65.45 O
ATOM 4 OP2 C B 586 -16.327 112.592 88.363 1.00 65.29 O
ATOM 5 O5' C B 586 -18.428 112.037 89.559 1.00 66.87 O
ATOM 6 C5' C B 586 -19.737 111.448 89.707 1.00 67.38 C
ATOM 7 C4' C B 586 -20.263 111.660 91.108 1.00 68.15 C
ATOM 8 O4' C B 586 -19.442 110.942 92.068 1.00 68.34 O
ATOM 9 C3' C B 586 -20.245 113.089 91.618 1.00 69.55 C
ATOM 10 O3' C B 586 -21.340 113.851 91.125 1.00 69.87 O
ATOM 11 C2' C B 586 -20.305 112.891 93.127 1.00 70.33 C
ATOM 12 O2' C B 586 -21.610 112.629 93.603 1.00 71.32 O
ATOM 13 C1' C B 586 -19.432 111.645 93.301 1.00 70.00 C
ATOM 14 N1 C B 586 -18.039 111.972 93.662 1.00 72.27 N
ATOM 15 C2 C B 586 -17.705 112.093 95.022 1.00 73.70 C
ATOM 16 O2 C B 586 -18.577 111.888 95.882 1.00 76.49 O
ATOM 17 N3 C B 586 -16.442 112.427 95.363 1.00 73.66 N
ATOM 18 C4 C B 586 -15.525 112.630 94.416 1.00 73.15 C
ATOM 19 N4 C B 586 -14.295 112.969 94.806 1.00 72.80 N
ATOM 20 C5 C B 586 -15.829 112.497 93.030 1.00 72.45 C
ATOM 21 C6 C B 586 -17.085 112.171 92.700 1.00 72.69 C
ATOM 22 P G B 587 -21.147 115.420 90.845 1.00 71.03 P
ATOM 23 OP1 G B 587 -22.435 115.950 90.334 1.00 72.38 O
ATOM 24 OP2 G B 587 -19.917 115.595 90.036 1.00 72.06 O
ATOM 25 O5' G B 587 -20.889 116.030 92.291 1.00 68.53 O
TER
Atoms:
C4: (-13.697,114.276,98.511)
N3: (-15.000,114.451,98.934)
OP1: (-8.151,114.439,104.671)
OP2: (-9.029,114.224,102.275)
C2: (-15.425,114.782,100.199)
C1': (-14.805,115.285,102.512)
C3': (-13.396,113.948,103.834)
O5': (-10.529,114.946,104.110)
O4': (-13.826,116.148,103.057)
C5': (-11.531,115.655,103.371)
P: (-9.024,114.930,103.580)
C4': (-12.915,115.393,103.903)
C2': (-14.866,114.091,103.464)
O2': (-15.675,114.427,104.572)
N1: (-14.415,114.945,101.131)
O4: (-13.473,113.975,97.335)
O2: (-16.609,114.921,100.469)
C6: (-13.093,114.789,100.768)
C5: (-12.712,114.473,99.527)
O3': (-13.204,113.263,105.067)
N3: (-15.000,114.451,98.934)
OP1: (-8.151,114.439,104.671)
OP2: (-9.029,114.224,102.275)
C2: (-15.425,114.782,100.199)
C1': (-14.805,115.285,102.512)
C3': (-13.396,113.948,103.834)
O5': (-10.529,114.946,104.110)
O4': (-13.826,116.148,103.057)
C5': (-11.531,115.655,103.371)
P: (-9.024,114.930,103.580)
C4': (-12.915,115.393,103.903)
C2': (-14.866,114.091,103.464)
O2': (-15.675,114.427,104.572)
N1: (-14.415,114.945,101.131)
O4: (-13.473,113.975,97.335)
O2: (-16.609,114.921,100.469)
C6: (-13.093,114.789,100.768)
C5: (-12.712,114.473,99.527)
O3': (-13.204,113.263,105.067)
C2: (-17.705,112.093,95.022)
OP1: (-18.502,112.210,87.063)
OP2: (-16.327,112.592,88.363)
C4: (-15.525,112.630,94.416)
O5': (-18.428,112.037,89.559)
C3': (-20.245,113.089,91.618)
C1': (-19.432,111.645,93.301)
O4': (-19.442,110.942,92.068)
C5': (-19.737,111.448,89.707)
P: (-17.609,111.870,88.201)
O2: (-18.577,111.888,95.882)
C4': (-20.263,111.660,91.108)
C2': (-20.305,112.891,93.127)
O2': (-21.610,112.629,93.603)
N1: (-18.039,111.972,93.662)
N3: (-16.442,112.427,95.363)
N4: (-14.295,112.969,94.806)
C6: (-17.085,112.171,92.700)
C5: (-15.829,112.497,93.030)
O3': (-21.340,113.851,91.125)
OP1: (-18.502,112.210,87.063)
OP2: (-16.327,112.592,88.363)
C4: (-15.525,112.630,94.416)
O5': (-18.428,112.037,89.559)
C3': (-20.245,113.089,91.618)
C1': (-19.432,111.645,93.301)
O4': (-19.442,110.942,92.068)
C5': (-19.737,111.448,89.707)
P: (-17.609,111.870,88.201)
O2: (-18.577,111.888,95.882)
C4': (-20.263,111.660,91.108)
C2': (-20.305,112.891,93.127)
O2': (-21.610,112.629,93.603)
N1: (-18.039,111.972,93.662)
N3: (-16.442,112.427,95.363)
N4: (-14.295,112.969,94.806)
C6: (-17.085,112.171,92.700)
C5: (-15.829,112.497,93.030)
O3': (-21.340,113.851,91.125)
Image (generated by PyMOL):