Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0547:0586
Extra
PDB:
ATOM 1 O3' C A 546 -9.014 117.196 102.871 1.00 88.18 O
ATOM 2 P U A 547 -9.357 115.642 103.127 1.00 90.17 P
ATOM 3 OP1 U A 547 -8.510 115.185 104.257 1.00 90.39 O
ATOM 4 OP2 U A 547 -9.314 114.907 101.835 1.00 88.39 O
ATOM 5 O5' U A 547 -10.876 115.656 103.613 1.00 90.89 O
ATOM 6 C5' U A 547 -11.868 116.370 102.863 1.00 90.48 C
ATOM 7 C4' U A 547 -13.258 116.071 103.365 1.00 90.54 C
ATOM 8 O4' U A 547 -14.195 116.802 102.522 1.00 91.67 O
ATOM 9 C3' U A 547 -13.678 114.609 103.275 1.00 90.05 C
ATOM 10 O3' U A 547 -13.439 113.909 104.494 1.00 87.11 O
ATOM 11 C2' U A 547 -15.149 114.695 102.889 1.00 90.73 C
ATOM 12 O2' U A 547 -15.986 114.966 103.995 1.00 91.17 O
ATOM 13 C1' U A 547 -15.129 115.905 101.953 1.00 91.51 C
ATOM 14 N1 U A 547 -14.699 115.606 100.574 1.00 92.00 N
ATOM 15 C2 U A 547 -15.665 115.575 99.582 1.00 93.21 C
ATOM 16 O2 U A 547 -16.846 115.799 99.790 1.00 95.12 O
ATOM 17 N3 U A 547 -15.196 115.274 98.327 1.00 93.64 N
ATOM 18 C4 U A 547 -13.889 115.016 97.967 1.00 93.78 C
ATOM 19 O4 U A 547 -13.630 114.710 96.802 1.00 93.58 O
ATOM 20 C5 U A 547 -12.953 115.083 99.040 1.00 93.23 C
ATOM 21 C6 U A 547 -13.376 115.364 100.271 1.00 92.18 C
ATOM 22 P U A 548 -13.142 112.328 104.460 1.00 86.08 P
ATOM 23 OP1 U A 548 -13.247 111.831 105.855 1.00 85.31 O
ATOM 24 OP2 U A 548 -11.888 112.102 103.695 1.00 86.56 O
ATOM 25 O5' U A 548 -14.354 111.722 103.618 1.00 84.59 O
TER
ATOM 1 O3' A B 585 -17.340 110.569 87.494 1.00 74.87 O
ATOM 2 P C B 586 -17.651 112.143 87.558 1.00 77.16 P
ATOM 3 OP1 C B 586 -18.552 112.447 86.417 1.00 77.25 O
ATOM 4 OP2 C B 586 -16.375 112.881 87.700 1.00 77.97 O
ATOM 5 O5' C B 586 -18.466 112.325 88.916 1.00 79.75 O
ATOM 6 C5' C B 586 -19.810 111.814 89.053 1.00 82.17 C
ATOM 7 C4' C B 586 -20.382 112.179 90.406 1.00 83.50 C
ATOM 8 O4' C B 586 -19.648 111.498 91.460 1.00 83.77 O
ATOM 9 C3' C B 586 -20.290 113.646 90.788 1.00 84.60 C
ATOM 10 O3' C B 586 -21.308 114.433 90.185 1.00 85.29 O
ATOM 11 C2' C B 586 -20.404 113.594 92.306 1.00 85.59 C
ATOM 12 O2' C B 586 -21.732 113.473 92.774 1.00 85.42 O
ATOM 13 C1' C B 586 -19.615 112.318 92.619 1.00 85.96 C
ATOM 14 N1 C B 586 -18.210 112.603 92.969 1.00 88.80 N
ATOM 15 C2 C B 586 -17.898 112.915 94.301 1.00 90.82 C
ATOM 16 O2 C B 586 -18.804 112.917 95.151 1.00 94.07 O
ATOM 17 N3 C B 586 -16.620 113.209 94.629 1.00 91.18 N
ATOM 18 C4 C B 586 -15.671 113.195 93.694 1.00 90.75 C
ATOM 19 N4 C B 586 -14.428 113.502 94.067 1.00 90.71 N
ATOM 20 C5 C B 586 -15.955 112.868 92.336 1.00 90.76 C
ATOM 21 C6 C B 586 -17.224 112.580 92.021 1.00 89.90 C
ATOM 22 P G B 587 -21.029 115.984 89.876 1.00 85.87 P
ATOM 23 OP1 G B 587 -22.248 116.544 89.248 1.00 86.59 O
ATOM 24 OP2 G B 587 -19.737 116.076 89.154 1.00 87.66 O
ATOM 25 O5' G B 587 -20.860 116.634 91.323 1.00 84.57 O
TER
ATOM 2 P U A 547 -9.357 115.642 103.127 1.00 90.17 P
ATOM 3 OP1 U A 547 -8.510 115.185 104.257 1.00 90.39 O
ATOM 4 OP2 U A 547 -9.314 114.907 101.835 1.00 88.39 O
ATOM 5 O5' U A 547 -10.876 115.656 103.613 1.00 90.89 O
ATOM 6 C5' U A 547 -11.868 116.370 102.863 1.00 90.48 C
ATOM 7 C4' U A 547 -13.258 116.071 103.365 1.00 90.54 C
ATOM 8 O4' U A 547 -14.195 116.802 102.522 1.00 91.67 O
ATOM 9 C3' U A 547 -13.678 114.609 103.275 1.00 90.05 C
ATOM 10 O3' U A 547 -13.439 113.909 104.494 1.00 87.11 O
ATOM 11 C2' U A 547 -15.149 114.695 102.889 1.00 90.73 C
ATOM 12 O2' U A 547 -15.986 114.966 103.995 1.00 91.17 O
ATOM 13 C1' U A 547 -15.129 115.905 101.953 1.00 91.51 C
ATOM 14 N1 U A 547 -14.699 115.606 100.574 1.00 92.00 N
ATOM 15 C2 U A 547 -15.665 115.575 99.582 1.00 93.21 C
ATOM 16 O2 U A 547 -16.846 115.799 99.790 1.00 95.12 O
ATOM 17 N3 U A 547 -15.196 115.274 98.327 1.00 93.64 N
ATOM 18 C4 U A 547 -13.889 115.016 97.967 1.00 93.78 C
ATOM 19 O4 U A 547 -13.630 114.710 96.802 1.00 93.58 O
ATOM 20 C5 U A 547 -12.953 115.083 99.040 1.00 93.23 C
ATOM 21 C6 U A 547 -13.376 115.364 100.271 1.00 92.18 C
ATOM 22 P U A 548 -13.142 112.328 104.460 1.00 86.08 P
ATOM 23 OP1 U A 548 -13.247 111.831 105.855 1.00 85.31 O
ATOM 24 OP2 U A 548 -11.888 112.102 103.695 1.00 86.56 O
ATOM 25 O5' U A 548 -14.354 111.722 103.618 1.00 84.59 O
TER
ATOM 1 O3' A B 585 -17.340 110.569 87.494 1.00 74.87 O
ATOM 2 P C B 586 -17.651 112.143 87.558 1.00 77.16 P
ATOM 3 OP1 C B 586 -18.552 112.447 86.417 1.00 77.25 O
ATOM 4 OP2 C B 586 -16.375 112.881 87.700 1.00 77.97 O
ATOM 5 O5' C B 586 -18.466 112.325 88.916 1.00 79.75 O
ATOM 6 C5' C B 586 -19.810 111.814 89.053 1.00 82.17 C
ATOM 7 C4' C B 586 -20.382 112.179 90.406 1.00 83.50 C
ATOM 8 O4' C B 586 -19.648 111.498 91.460 1.00 83.77 O
ATOM 9 C3' C B 586 -20.290 113.646 90.788 1.00 84.60 C
ATOM 10 O3' C B 586 -21.308 114.433 90.185 1.00 85.29 O
ATOM 11 C2' C B 586 -20.404 113.594 92.306 1.00 85.59 C
ATOM 12 O2' C B 586 -21.732 113.473 92.774 1.00 85.42 O
ATOM 13 C1' C B 586 -19.615 112.318 92.619 1.00 85.96 C
ATOM 14 N1 C B 586 -18.210 112.603 92.969 1.00 88.80 N
ATOM 15 C2 C B 586 -17.898 112.915 94.301 1.00 90.82 C
ATOM 16 O2 C B 586 -18.804 112.917 95.151 1.00 94.07 O
ATOM 17 N3 C B 586 -16.620 113.209 94.629 1.00 91.18 N
ATOM 18 C4 C B 586 -15.671 113.195 93.694 1.00 90.75 C
ATOM 19 N4 C B 586 -14.428 113.502 94.067 1.00 90.71 N
ATOM 20 C5 C B 586 -15.955 112.868 92.336 1.00 90.76 C
ATOM 21 C6 C B 586 -17.224 112.580 92.021 1.00 89.90 C
ATOM 22 P G B 587 -21.029 115.984 89.876 1.00 85.87 P
ATOM 23 OP1 G B 587 -22.248 116.544 89.248 1.00 86.59 O
ATOM 24 OP2 G B 587 -19.737 116.076 89.154 1.00 87.66 O
ATOM 25 O5' G B 587 -20.860 116.634 91.323 1.00 84.57 O
TER
Atoms:
C4: (-13.889,115.016,97.967)
N3: (-15.196,115.274,98.327)
OP1: (-8.510,115.185,104.257)
OP2: (-9.314,114.907,101.835)
C2: (-15.665,115.575,99.582)
C1': (-15.129,115.905,101.953)
C3': (-13.678,114.609,103.275)
O5': (-10.876,115.656,103.613)
O4': (-14.195,116.802,102.522)
C5': (-11.868,116.370,102.863)
P: (-9.357,115.642,103.127)
C4': (-13.258,116.071,103.365)
C2': (-15.149,114.695,102.889)
O2': (-15.986,114.966,103.995)
N1: (-14.699,115.606,100.574)
O4: (-13.630,114.710,96.802)
O2: (-16.846,115.799,99.790)
C6: (-13.376,115.364,100.271)
C5: (-12.953,115.083,99.040)
O3': (-13.439,113.909,104.494)
N3: (-15.196,115.274,98.327)
OP1: (-8.510,115.185,104.257)
OP2: (-9.314,114.907,101.835)
C2: (-15.665,115.575,99.582)
C1': (-15.129,115.905,101.953)
C3': (-13.678,114.609,103.275)
O5': (-10.876,115.656,103.613)
O4': (-14.195,116.802,102.522)
C5': (-11.868,116.370,102.863)
P: (-9.357,115.642,103.127)
C4': (-13.258,116.071,103.365)
C2': (-15.149,114.695,102.889)
O2': (-15.986,114.966,103.995)
N1: (-14.699,115.606,100.574)
O4: (-13.630,114.710,96.802)
O2: (-16.846,115.799,99.790)
C6: (-13.376,115.364,100.271)
C5: (-12.953,115.083,99.040)
O3': (-13.439,113.909,104.494)
C2: (-17.898,112.915,94.301)
OP1: (-18.552,112.447,86.417)
OP2: (-16.375,112.881,87.700)
C4: (-15.671,113.195,93.694)
O5': (-18.466,112.325,88.916)
C3': (-20.290,113.646,90.788)
C1': (-19.615,112.318,92.619)
O4': (-19.648,111.498,91.460)
C5': (-19.810,111.814,89.053)
P: (-17.651,112.143,87.558)
O2: (-18.804,112.917,95.151)
C4': (-20.382,112.179,90.406)
C2': (-20.404,113.594,92.306)
O2': (-21.732,113.473,92.774)
N1: (-18.210,112.603,92.969)
N3: (-16.620,113.209,94.629)
N4: (-14.428,113.502,94.067)
C6: (-17.224,112.580,92.021)
C5: (-15.955,112.868,92.336)
O3': (-21.308,114.433,90.185)
OP1: (-18.552,112.447,86.417)
OP2: (-16.375,112.881,87.700)
C4: (-15.671,113.195,93.694)
O5': (-18.466,112.325,88.916)
C3': (-20.290,113.646,90.788)
C1': (-19.615,112.318,92.619)
O4': (-19.648,111.498,91.460)
C5': (-19.810,111.814,89.053)
P: (-17.651,112.143,87.558)
O2: (-18.804,112.917,95.151)
C4': (-20.382,112.179,90.406)
C2': (-20.404,113.594,92.306)
O2': (-21.732,113.473,92.774)
N1: (-18.210,112.603,92.969)
N3: (-16.620,113.209,94.629)
N4: (-14.428,113.502,94.067)
C6: (-17.224,112.580,92.021)
C5: (-15.955,112.868,92.336)
O3': (-21.308,114.433,90.185)
Image (generated by PyMOL):