Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:954:926
Extra
PDB:
ATOM 1 O3' A A 53 69.279 6.767 112.152 1.00 81.87 O
ATOM 2 P U A 54 67.729 6.662 112.576 1.00 81.92 P
ATOM 3 OP1 U A 54 67.705 6.311 114.017 1.00 81.53 O
ATOM 4 OP2 U A 54 67.010 5.806 111.592 1.00 82.11 O
ATOM 5 O5' U A 54 67.187 8.152 112.428 1.00 82.68 O
ATOM 6 C5' U A 54 67.994 9.257 112.875 1.00 82.56 C
ATOM 7 C4' U A 54 67.345 10.580 112.540 1.00 80.64 C
ATOM 8 O4' U A 54 67.276 10.767 111.097 1.00 80.36 O
ATOM 9 C3' U A 54 65.941 10.819 113.080 1.00 78.99 C
ATOM 10 O3' U A 54 65.872 12.147 113.561 1.00 77.61 O
ATOM 11 C2' U A 54 65.061 10.654 111.843 1.00 79.96 C
ATOM 12 O2' U A 54 63.869 11.413 111.913 1.00 81.19 O
ATOM 13 C1' U A 54 65.976 11.194 110.745 1.00 79.97 C
ATOM 14 N1 U A 54 65.671 10.724 109.381 1.00 78.81 N
ATOM 15 C2 U A 54 65.616 11.677 108.371 1.00 77.74 C
ATOM 16 O2 U A 54 65.828 12.862 108.562 1.00 77.15 O
ATOM 17 N3 U A 54 65.302 11.189 107.126 1.00 76.58 N
ATOM 18 C4 U A 54 65.046 9.879 106.786 1.00 77.43 C
ATOM 19 O4 U A 54 64.741 9.603 105.622 1.00 76.34 O
ATOM 20 C5 U A 54 65.135 8.952 107.875 1.00 77.95 C
ATOM 21 C6 U A 54 65.437 9.394 109.103 1.00 78.45 C
ATOM 22 P A A 55 66.292 12.457 115.080 1.00 77.79 P
ATOM 23 OP1 A A 55 66.080 11.212 115.866 1.00 78.15 O
ATOM 24 OP2 A A 55 65.623 13.715 115.507 1.00 77.09 O
ATOM 25 O5' A A 55 67.863 12.719 114.999 1.00 74.73 O
TER
ATOM 1 O3' C B 25 61.011 12.196 95.899 1.00 69.37 O
ATOM 2 P C B 26 62.569 12.565 95.843 1.00 66.09 P
ATOM 3 OP1 C B 26 62.822 13.149 94.499 1.00 66.95 O
ATOM 4 OP2 C B 26 63.350 11.388 96.288 1.00 67.07 O
ATOM 5 O5' C B 26 62.720 13.690 96.958 1.00 65.44 O
ATOM 6 C5' C B 26 62.052 14.960 96.826 1.00 64.92 C
ATOM 7 C4' C B 26 62.470 15.886 97.943 1.00 65.50 C
ATOM 8 O4' C B 26 61.846 15.490 99.195 1.00 66.53 O
ATOM 9 C3' C B 26 63.955 15.864 98.250 1.00 64.61 C
ATOM 10 O3' C B 26 64.703 16.643 97.339 1.00 63.66 O
ATOM 11 C2' C B 26 64.000 16.370 99.683 1.00 65.09 C
ATOM 12 O2' C B 26 63.875 17.773 99.780 1.00 65.60 O
ATOM 13 C1' C B 26 62.756 15.696 100.269 1.00 66.07 C
ATOM 14 N1 C B 26 63.069 14.387 100.876 1.00 67.58 N
ATOM 15 C2 C B 26 63.509 14.348 102.206 1.00 68.30 C
ATOM 16 O2 C B 26 63.593 15.410 102.846 1.00 68.25 O
ATOM 17 N3 C B 26 63.829 13.153 102.760 1.00 68.68 N
ATOM 18 C4 C B 26 63.720 12.032 102.042 1.00 68.36 C
ATOM 19 N4 C B 26 64.062 10.882 102.627 1.00 69.01 N
ATOM 20 C5 C B 26 63.261 12.041 100.693 1.00 67.10 C
ATOM 21 C6 C B 26 62.949 13.226 100.156 1.00 67.47 C
ATOM 22 P U B 27 66.291 16.451 97.264 1.00 64.76 P
ATOM 23 OP1 U B 27 66.788 17.160 96.055 1.00 65.46 O
ATOM 24 OP2 U B 27 66.583 15.005 97.432 1.00 65.88 O
ATOM 25 O5' U B 27 66.791 17.222 98.560 1.00 61.18 O
TER
ATOM 2 P U A 54 67.729 6.662 112.576 1.00 81.92 P
ATOM 3 OP1 U A 54 67.705 6.311 114.017 1.00 81.53 O
ATOM 4 OP2 U A 54 67.010 5.806 111.592 1.00 82.11 O
ATOM 5 O5' U A 54 67.187 8.152 112.428 1.00 82.68 O
ATOM 6 C5' U A 54 67.994 9.257 112.875 1.00 82.56 C
ATOM 7 C4' U A 54 67.345 10.580 112.540 1.00 80.64 C
ATOM 8 O4' U A 54 67.276 10.767 111.097 1.00 80.36 O
ATOM 9 C3' U A 54 65.941 10.819 113.080 1.00 78.99 C
ATOM 10 O3' U A 54 65.872 12.147 113.561 1.00 77.61 O
ATOM 11 C2' U A 54 65.061 10.654 111.843 1.00 79.96 C
ATOM 12 O2' U A 54 63.869 11.413 111.913 1.00 81.19 O
ATOM 13 C1' U A 54 65.976 11.194 110.745 1.00 79.97 C
ATOM 14 N1 U A 54 65.671 10.724 109.381 1.00 78.81 N
ATOM 15 C2 U A 54 65.616 11.677 108.371 1.00 77.74 C
ATOM 16 O2 U A 54 65.828 12.862 108.562 1.00 77.15 O
ATOM 17 N3 U A 54 65.302 11.189 107.126 1.00 76.58 N
ATOM 18 C4 U A 54 65.046 9.879 106.786 1.00 77.43 C
ATOM 19 O4 U A 54 64.741 9.603 105.622 1.00 76.34 O
ATOM 20 C5 U A 54 65.135 8.952 107.875 1.00 77.95 C
ATOM 21 C6 U A 54 65.437 9.394 109.103 1.00 78.45 C
ATOM 22 P A A 55 66.292 12.457 115.080 1.00 77.79 P
ATOM 23 OP1 A A 55 66.080 11.212 115.866 1.00 78.15 O
ATOM 24 OP2 A A 55 65.623 13.715 115.507 1.00 77.09 O
ATOM 25 O5' A A 55 67.863 12.719 114.999 1.00 74.73 O
TER
ATOM 1 O3' C B 25 61.011 12.196 95.899 1.00 69.37 O
ATOM 2 P C B 26 62.569 12.565 95.843 1.00 66.09 P
ATOM 3 OP1 C B 26 62.822 13.149 94.499 1.00 66.95 O
ATOM 4 OP2 C B 26 63.350 11.388 96.288 1.00 67.07 O
ATOM 5 O5' C B 26 62.720 13.690 96.958 1.00 65.44 O
ATOM 6 C5' C B 26 62.052 14.960 96.826 1.00 64.92 C
ATOM 7 C4' C B 26 62.470 15.886 97.943 1.00 65.50 C
ATOM 8 O4' C B 26 61.846 15.490 99.195 1.00 66.53 O
ATOM 9 C3' C B 26 63.955 15.864 98.250 1.00 64.61 C
ATOM 10 O3' C B 26 64.703 16.643 97.339 1.00 63.66 O
ATOM 11 C2' C B 26 64.000 16.370 99.683 1.00 65.09 C
ATOM 12 O2' C B 26 63.875 17.773 99.780 1.00 65.60 O
ATOM 13 C1' C B 26 62.756 15.696 100.269 1.00 66.07 C
ATOM 14 N1 C B 26 63.069 14.387 100.876 1.00 67.58 N
ATOM 15 C2 C B 26 63.509 14.348 102.206 1.00 68.30 C
ATOM 16 O2 C B 26 63.593 15.410 102.846 1.00 68.25 O
ATOM 17 N3 C B 26 63.829 13.153 102.760 1.00 68.68 N
ATOM 18 C4 C B 26 63.720 12.032 102.042 1.00 68.36 C
ATOM 19 N4 C B 26 64.062 10.882 102.627 1.00 69.01 N
ATOM 20 C5 C B 26 63.261 12.041 100.693 1.00 67.10 C
ATOM 21 C6 C B 26 62.949 13.226 100.156 1.00 67.47 C
ATOM 22 P U B 27 66.291 16.451 97.264 1.00 64.76 P
ATOM 23 OP1 U B 27 66.788 17.160 96.055 1.00 65.46 O
ATOM 24 OP2 U B 27 66.583 15.005 97.432 1.00 65.88 O
ATOM 25 O5' U B 27 66.791 17.222 98.560 1.00 61.18 O
TER
Atoms:
C4: (65.046,9.879,106.786)
N3: (65.302,11.189,107.126)
OP1: (67.705,6.311,114.017)
OP2: (67.010,5.806,111.592)
C2: (65.616,11.677,108.371)
C1': (65.976,11.194,110.745)
C3': (65.941,10.819,113.080)
O5': (67.187,8.152,112.428)
O4': (67.276,10.767,111.097)
C5': (67.994,9.257,112.875)
P: (67.729,6.662,112.576)
C4': (67.345,10.580,112.540)
C2': (65.061,10.654,111.843)
O2': (63.869,11.413,111.913)
N1: (65.671,10.724,109.381)
O4: (64.741,9.603,105.622)
O2: (65.828,12.862,108.562)
C6: (65.437,9.394,109.103)
C5: (65.135,8.952,107.875)
O3': (65.872,12.147,113.561)
N3: (65.302,11.189,107.126)
OP1: (67.705,6.311,114.017)
OP2: (67.010,5.806,111.592)
C2: (65.616,11.677,108.371)
C1': (65.976,11.194,110.745)
C3': (65.941,10.819,113.080)
O5': (67.187,8.152,112.428)
O4': (67.276,10.767,111.097)
C5': (67.994,9.257,112.875)
P: (67.729,6.662,112.576)
C4': (67.345,10.580,112.540)
C2': (65.061,10.654,111.843)
O2': (63.869,11.413,111.913)
N1: (65.671,10.724,109.381)
O4: (64.741,9.603,105.622)
O2: (65.828,12.862,108.562)
C6: (65.437,9.394,109.103)
C5: (65.135,8.952,107.875)
O3': (65.872,12.147,113.561)
C2: (63.509,14.348,102.206)
OP1: (62.822,13.149,94.499)
OP2: (63.350,11.388,96.288)
C4: (63.720,12.032,102.042)
O5': (62.720,13.690,96.958)
C3': (63.955,15.864,98.250)
C1': (62.756,15.696,100.269)
O4': (61.846,15.490,99.195)
C5': (62.052,14.960,96.826)
P: (62.569,12.565,95.843)
O2: (63.593,15.410,102.846)
C4': (62.470,15.886,97.943)
C2': (64.000,16.370,99.683)
O2': (63.875,17.773,99.780)
N1: (63.069,14.387,100.876)
N3: (63.829,13.153,102.760)
N4: (64.062,10.882,102.627)
C6: (62.949,13.226,100.156)
C5: (63.261,12.041,100.693)
O3': (64.703,16.643,97.339)
OP1: (62.822,13.149,94.499)
OP2: (63.350,11.388,96.288)
C4: (63.720,12.032,102.042)
O5': (62.720,13.690,96.958)
C3': (63.955,15.864,98.250)
C1': (62.756,15.696,100.269)
O4': (61.846,15.490,99.195)
C5': (62.052,14.960,96.826)
P: (62.569,12.565,95.843)
O2: (63.593,15.410,102.846)
C4': (62.470,15.886,97.943)
C2': (64.000,16.370,99.683)
O2': (63.875,17.773,99.780)
N1: (63.069,14.387,100.876)
N3: (63.829,13.153,102.760)
N4: (64.062,10.882,102.627)
C6: (62.949,13.226,100.156)
C5: (63.261,12.041,100.693)
O3': (64.703,16.643,97.339)
Image (generated by PyMOL):