Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0887:0751
Extra
PDB:
ATOM 1 O3' C A 886 57.951 108.681 81.271 1.00 27.04 O
ATOM 2 P U A 887 56.372 108.489 81.470 1.00 28.67 P
ATOM 3 OP1 U A 887 56.176 107.992 82.861 1.00 26.15 O
ATOM 4 OP2 U A 887 55.850 107.699 80.324 1.00 28.75 O
ATOM 5 O5' U A 887 55.791 109.971 81.407 1.00 27.15 O
ATOM 6 C5' U A 887 56.040 110.883 82.487 1.00 27.55 C
ATOM 7 C4' U A 887 55.681 112.299 82.107 1.00 26.43 C
ATOM 8 O4' U A 887 56.426 112.720 80.938 1.00 27.08 O
ATOM 9 C3' U A 887 54.260 112.585 81.672 1.00 26.78 C
ATOM 10 O3' U A 887 53.342 112.609 82.756 1.00 28.35 O
ATOM 11 C2' U A 887 54.427 113.975 81.085 1.00 27.24 C
ATOM 12 O2' U A 887 54.584 114.946 82.099 1.00 29.20 O
ATOM 13 C1' U A 887 55.757 113.826 80.349 1.00 28.57 C
ATOM 14 N1 U A 887 55.551 113.594 78.907 1.00 30.36 N
ATOM 15 C2 U A 887 55.200 114.699 78.142 1.00 30.28 C
ATOM 16 O2 U A 887 55.119 115.823 78.603 1.00 32.52 O
ATOM 17 N3 U A 887 54.947 114.441 76.821 1.00 29.33 N
ATOM 18 C4 U A 887 55.013 113.228 76.186 1.00 31.11 C
ATOM 19 O4 U A 887 54.621 113.142 75.019 1.00 31.30 O
ATOM 20 C5 U A 887 55.424 112.135 77.027 1.00 30.59 C
ATOM 21 C6 U A 887 55.670 112.349 78.326 1.00 29.41 C
ATOM 22 P G A 888 51.784 112.307 82.483 1.00 27.00 P
ATOM 23 OP1 G A 888 51.067 112.434 83.781 1.00 25.69 O
ATOM 24 OP2 G A 888 51.700 111.048 81.716 1.00 26.88 O
ATOM 25 O5' G A 888 51.315 113.484 81.523 1.00 22.90 O
TER
ATOM 1 O3' C B 750 51.079 117.077 65.529 1.00 22.13 O
ATOM 2 P C B 751 52.668 117.136 65.734 1.00 24.88 P
ATOM 3 OP1 C B 751 53.211 118.011 64.668 1.00 25.75 O
ATOM 4 OP2 C B 751 53.208 115.763 65.893 1.00 22.84 O
ATOM 5 O5' C B 751 52.823 117.916 67.113 1.00 23.11 O
ATOM 6 C5' C B 751 52.404 119.280 67.200 1.00 23.48 C
ATOM 7 C4' C B 751 52.511 119.788 68.610 1.00 22.28 C
ATOM 8 O4' C B 751 51.674 118.996 69.484 1.00 21.23 O
ATOM 9 C3' C B 751 53.864 119.710 69.280 1.00 22.03 C
ATOM 10 O3' C B 751 54.763 120.720 68.841 1.00 23.49 O
ATOM 11 C2' C B 751 53.460 119.891 70.733 1.00 22.18 C
ATOM 12 O2' C B 751 53.127 121.226 71.054 1.00 19.24 O
ATOM 13 C1' C B 751 52.207 119.021 70.792 1.00 20.86 C
ATOM 14 N1 C B 751 52.567 117.650 71.189 1.00 23.55 N
ATOM 15 C2 C B 751 52.824 117.397 72.540 1.00 25.22 C
ATOM 16 O2 C B 751 52.675 118.318 73.363 1.00 28.03 O
ATOM 17 N3 C B 751 53.231 116.164 72.918 1.00 24.67 N
ATOM 18 C4 C B 751 53.381 115.202 72.006 1.00 23.77 C
ATOM 19 N4 C B 751 53.837 114.017 72.423 1.00 24.41 N
ATOM 20 C5 C B 751 53.087 115.417 70.628 1.00 22.74 C
ATOM 21 C6 C B 751 52.685 116.644 70.266 1.00 23.94 C
ATOM 22 P G B 752 56.328 120.382 68.697 1.00 26.18 P
ATOM 23 OP1 G B 752 56.984 121.571 68.106 1.00 28.07 O
ATOM 24 OP2 G B 752 56.459 119.074 68.024 1.00 26.79 O
ATOM 25 O5' G B 752 56.840 120.207 70.196 1.00 25.94 O
TER
ATOM 2 P U A 887 56.372 108.489 81.470 1.00 28.67 P
ATOM 3 OP1 U A 887 56.176 107.992 82.861 1.00 26.15 O
ATOM 4 OP2 U A 887 55.850 107.699 80.324 1.00 28.75 O
ATOM 5 O5' U A 887 55.791 109.971 81.407 1.00 27.15 O
ATOM 6 C5' U A 887 56.040 110.883 82.487 1.00 27.55 C
ATOM 7 C4' U A 887 55.681 112.299 82.107 1.00 26.43 C
ATOM 8 O4' U A 887 56.426 112.720 80.938 1.00 27.08 O
ATOM 9 C3' U A 887 54.260 112.585 81.672 1.00 26.78 C
ATOM 10 O3' U A 887 53.342 112.609 82.756 1.00 28.35 O
ATOM 11 C2' U A 887 54.427 113.975 81.085 1.00 27.24 C
ATOM 12 O2' U A 887 54.584 114.946 82.099 1.00 29.20 O
ATOM 13 C1' U A 887 55.757 113.826 80.349 1.00 28.57 C
ATOM 14 N1 U A 887 55.551 113.594 78.907 1.00 30.36 N
ATOM 15 C2 U A 887 55.200 114.699 78.142 1.00 30.28 C
ATOM 16 O2 U A 887 55.119 115.823 78.603 1.00 32.52 O
ATOM 17 N3 U A 887 54.947 114.441 76.821 1.00 29.33 N
ATOM 18 C4 U A 887 55.013 113.228 76.186 1.00 31.11 C
ATOM 19 O4 U A 887 54.621 113.142 75.019 1.00 31.30 O
ATOM 20 C5 U A 887 55.424 112.135 77.027 1.00 30.59 C
ATOM 21 C6 U A 887 55.670 112.349 78.326 1.00 29.41 C
ATOM 22 P G A 888 51.784 112.307 82.483 1.00 27.00 P
ATOM 23 OP1 G A 888 51.067 112.434 83.781 1.00 25.69 O
ATOM 24 OP2 G A 888 51.700 111.048 81.716 1.00 26.88 O
ATOM 25 O5' G A 888 51.315 113.484 81.523 1.00 22.90 O
TER
ATOM 1 O3' C B 750 51.079 117.077 65.529 1.00 22.13 O
ATOM 2 P C B 751 52.668 117.136 65.734 1.00 24.88 P
ATOM 3 OP1 C B 751 53.211 118.011 64.668 1.00 25.75 O
ATOM 4 OP2 C B 751 53.208 115.763 65.893 1.00 22.84 O
ATOM 5 O5' C B 751 52.823 117.916 67.113 1.00 23.11 O
ATOM 6 C5' C B 751 52.404 119.280 67.200 1.00 23.48 C
ATOM 7 C4' C B 751 52.511 119.788 68.610 1.00 22.28 C
ATOM 8 O4' C B 751 51.674 118.996 69.484 1.00 21.23 O
ATOM 9 C3' C B 751 53.864 119.710 69.280 1.00 22.03 C
ATOM 10 O3' C B 751 54.763 120.720 68.841 1.00 23.49 O
ATOM 11 C2' C B 751 53.460 119.891 70.733 1.00 22.18 C
ATOM 12 O2' C B 751 53.127 121.226 71.054 1.00 19.24 O
ATOM 13 C1' C B 751 52.207 119.021 70.792 1.00 20.86 C
ATOM 14 N1 C B 751 52.567 117.650 71.189 1.00 23.55 N
ATOM 15 C2 C B 751 52.824 117.397 72.540 1.00 25.22 C
ATOM 16 O2 C B 751 52.675 118.318 73.363 1.00 28.03 O
ATOM 17 N3 C B 751 53.231 116.164 72.918 1.00 24.67 N
ATOM 18 C4 C B 751 53.381 115.202 72.006 1.00 23.77 C
ATOM 19 N4 C B 751 53.837 114.017 72.423 1.00 24.41 N
ATOM 20 C5 C B 751 53.087 115.417 70.628 1.00 22.74 C
ATOM 21 C6 C B 751 52.685 116.644 70.266 1.00 23.94 C
ATOM 22 P G B 752 56.328 120.382 68.697 1.00 26.18 P
ATOM 23 OP1 G B 752 56.984 121.571 68.106 1.00 28.07 O
ATOM 24 OP2 G B 752 56.459 119.074 68.024 1.00 26.79 O
ATOM 25 O5' G B 752 56.840 120.207 70.196 1.00 25.94 O
TER
Atoms:
C4: (55.013,113.228,76.186)
N3: (54.947,114.441,76.821)
OP1: (56.176,107.992,82.861)
OP2: (55.850,107.699,80.324)
C2: (55.200,114.699,78.142)
C1': (55.757,113.826,80.349)
C3': (54.260,112.585,81.672)
O5': (55.791,109.971,81.407)
O4': (56.426,112.720,80.938)
C5': (56.040,110.883,82.487)
P: (56.372,108.489,81.470)
C4': (55.681,112.299,82.107)
C2': (54.427,113.975,81.085)
O2': (54.584,114.946,82.099)
N1: (55.551,113.594,78.907)
O4: (54.621,113.142,75.019)
O2: (55.119,115.823,78.603)
C6: (55.670,112.349,78.326)
C5: (55.424,112.135,77.027)
O3': (53.342,112.609,82.756)
N3: (54.947,114.441,76.821)
OP1: (56.176,107.992,82.861)
OP2: (55.850,107.699,80.324)
C2: (55.200,114.699,78.142)
C1': (55.757,113.826,80.349)
C3': (54.260,112.585,81.672)
O5': (55.791,109.971,81.407)
O4': (56.426,112.720,80.938)
C5': (56.040,110.883,82.487)
P: (56.372,108.489,81.470)
C4': (55.681,112.299,82.107)
C2': (54.427,113.975,81.085)
O2': (54.584,114.946,82.099)
N1: (55.551,113.594,78.907)
O4: (54.621,113.142,75.019)
O2: (55.119,115.823,78.603)
C6: (55.670,112.349,78.326)
C5: (55.424,112.135,77.027)
O3': (53.342,112.609,82.756)
C2: (52.824,117.397,72.540)
OP1: (53.211,118.011,64.668)
OP2: (53.208,115.763,65.893)
C4: (53.381,115.202,72.006)
O5': (52.823,117.916,67.113)
C3': (53.864,119.710,69.280)
C1': (52.207,119.021,70.792)
O4': (51.674,118.996,69.484)
C5': (52.404,119.280,67.200)
P: (52.668,117.136,65.734)
O2: (52.675,118.318,73.363)
C4': (52.511,119.788,68.610)
C2': (53.460,119.891,70.733)
O2': (53.127,121.226,71.054)
N1: (52.567,117.650,71.189)
N3: (53.231,116.164,72.918)
N4: (53.837,114.017,72.423)
C6: (52.685,116.644,70.266)
C5: (53.087,115.417,70.628)
O3': (54.763,120.720,68.841)
OP1: (53.211,118.011,64.668)
OP2: (53.208,115.763,65.893)
C4: (53.381,115.202,72.006)
O5': (52.823,117.916,67.113)
C3': (53.864,119.710,69.280)
C1': (52.207,119.021,70.792)
O4': (51.674,118.996,69.484)
C5': (52.404,119.280,67.200)
P: (52.668,117.136,65.734)
O2: (52.675,118.318,73.363)
C4': (52.511,119.788,68.610)
C2': (53.460,119.891,70.733)
O2': (53.127,121.226,71.054)
N1: (52.567,117.650,71.189)
N3: (53.231,116.164,72.918)
N4: (53.837,114.017,72.423)
C6: (52.685,116.644,70.266)
C5: (53.087,115.417,70.628)
O3': (54.763,120.720,68.841)
Image (generated by PyMOL):