Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2381:A2329
Extra
PDB:
ATOM 1 O3' A A2380 -28.127 124.140 176.772 1.00 7.59 O
ATOM 2 P U A2381 -28.981 123.807 178.085 1.00 19.27 P
ATOM 3 OP1 U A2381 -30.209 124.633 178.047 1.00 37.70 O
ATOM 4 OP2 U A2381 -28.068 123.907 179.249 1.00 37.70 O
ATOM 5 O5' U A2381 -29.399 122.278 177.888 1.00 8.50 O
ATOM 6 C5' U A2381 -28.584 121.209 178.419 1.00 8.50 C
ATOM 7 C4' U A2381 -28.997 119.886 177.830 1.00 8.50 C
ATOM 8 O4' U A2381 -30.439 119.780 177.905 1.00 8.50 O
ATOM 9 C3' U A2381 -28.690 119.679 176.362 1.00 8.50 C
ATOM 10 O3' U A2381 -27.372 119.220 176.161 1.00 8.50 O
ATOM 11 C2' U A2381 -29.718 118.635 175.965 1.00 8.50 C
ATOM 12 O2' U A2381 -29.331 117.327 176.349 1.00 8.50 O
ATOM 13 C1' U A2381 -30.934 119.093 176.774 1.00 8.50 C
ATOM 14 N1 U A2381 -31.746 120.039 176.000 1.00 33.40 N
ATOM 15 C2 U A2381 -32.403 119.565 174.880 1.00 33.40 C
ATOM 16 O2 U A2381 -32.370 118.390 174.530 1.00 33.40 O
ATOM 17 N3 U A2381 -33.094 120.516 174.177 1.00 33.40 N
ATOM 18 C4 U A2381 -33.191 121.857 174.476 1.00 33.40 C
ATOM 19 O4 U A2381 -33.819 122.599 173.726 1.00 33.40 O
ATOM 20 C5 U A2381 -32.501 122.256 175.655 1.00 33.40 C
ATOM 21 C6 U A2381 -31.826 121.357 176.359 1.00 33.40 C
ATOM 22 P G A2382 -26.431 119.988 175.116 1.00 11.75 P
ATOM 23 OP1 G A2382 -24.995 119.676 175.387 1.00 18.74 O
ATOM 24 OP2 G A2382 -26.904 121.393 175.158 1.00 18.74 O
ATOM 25 O5' G A2382 -26.823 119.372 173.700 1.00 29.78 O
TER
ATOM 1 O3' A B2328 -38.640 119.166 164.385 1.00 0.96 O
ATOM 2 P C B2329 -39.104 118.026 165.415 1.00 18.60 P
ATOM 3 OP1 C B2329 -39.426 116.800 164.638 1.00 29.59 O
ATOM 4 OP2 C B2329 -40.136 118.614 166.332 1.00 29.59 O
ATOM 5 O5' C B2329 -37.770 117.770 166.243 1.00 8.56 O
ATOM 6 C5' C B2329 -36.670 117.097 165.636 1.00 8.56 C
ATOM 7 C4' C B2329 -35.770 116.509 166.689 1.00 8.56 C
ATOM 8 O4' C B2329 -34.951 117.534 167.286 1.00 8.56 O
ATOM 9 C3' C B2329 -36.460 115.837 167.856 1.00 8.56 C
ATOM 10 O3' C B2329 -36.795 114.508 167.509 1.00 8.56 O
ATOM 11 C2' C B2329 -35.387 115.875 168.929 1.00 8.56 C
ATOM 12 O2' C B2329 -34.456 114.845 168.703 1.00 8.56 O
ATOM 13 C1' C B2329 -34.681 117.196 168.625 1.00 8.56 C
ATOM 14 N1 C B2329 -35.066 118.332 169.470 1.00 17.99 N
ATOM 15 C2 C B2329 -34.312 118.620 170.632 1.00 17.99 C
ATOM 16 O2 C B2329 -33.359 117.868 170.959 1.00 17.99 O
ATOM 17 N3 C B2329 -34.637 119.702 171.369 1.00 17.99 N
ATOM 18 C4 C B2329 -35.655 120.475 170.999 1.00 17.99 C
ATOM 19 N4 C B2329 -35.914 121.561 171.734 1.00 17.99 N
ATOM 20 C5 C B2329 -36.449 120.182 169.853 1.00 17.99 C
ATOM 21 C6 C B2329 -36.124 119.114 169.128 1.00 17.99 C
ATOM 22 P A B2330 -38.025 113.790 168.239 1.00 44.37 P
ATOM 23 OP1 A B2330 -38.082 112.401 167.716 1.00 34.98 O
ATOM 24 OP2 A B2330 -39.221 114.654 168.157 1.00 34.98 O
ATOM 25 O5' A B2330 -37.559 113.747 169.755 1.00 12.02 O
TER
ATOM 2 P U A2381 -28.981 123.807 178.085 1.00 19.27 P
ATOM 3 OP1 U A2381 -30.209 124.633 178.047 1.00 37.70 O
ATOM 4 OP2 U A2381 -28.068 123.907 179.249 1.00 37.70 O
ATOM 5 O5' U A2381 -29.399 122.278 177.888 1.00 8.50 O
ATOM 6 C5' U A2381 -28.584 121.209 178.419 1.00 8.50 C
ATOM 7 C4' U A2381 -28.997 119.886 177.830 1.00 8.50 C
ATOM 8 O4' U A2381 -30.439 119.780 177.905 1.00 8.50 O
ATOM 9 C3' U A2381 -28.690 119.679 176.362 1.00 8.50 C
ATOM 10 O3' U A2381 -27.372 119.220 176.161 1.00 8.50 O
ATOM 11 C2' U A2381 -29.718 118.635 175.965 1.00 8.50 C
ATOM 12 O2' U A2381 -29.331 117.327 176.349 1.00 8.50 O
ATOM 13 C1' U A2381 -30.934 119.093 176.774 1.00 8.50 C
ATOM 14 N1 U A2381 -31.746 120.039 176.000 1.00 33.40 N
ATOM 15 C2 U A2381 -32.403 119.565 174.880 1.00 33.40 C
ATOM 16 O2 U A2381 -32.370 118.390 174.530 1.00 33.40 O
ATOM 17 N3 U A2381 -33.094 120.516 174.177 1.00 33.40 N
ATOM 18 C4 U A2381 -33.191 121.857 174.476 1.00 33.40 C
ATOM 19 O4 U A2381 -33.819 122.599 173.726 1.00 33.40 O
ATOM 20 C5 U A2381 -32.501 122.256 175.655 1.00 33.40 C
ATOM 21 C6 U A2381 -31.826 121.357 176.359 1.00 33.40 C
ATOM 22 P G A2382 -26.431 119.988 175.116 1.00 11.75 P
ATOM 23 OP1 G A2382 -24.995 119.676 175.387 1.00 18.74 O
ATOM 24 OP2 G A2382 -26.904 121.393 175.158 1.00 18.74 O
ATOM 25 O5' G A2382 -26.823 119.372 173.700 1.00 29.78 O
TER
ATOM 1 O3' A B2328 -38.640 119.166 164.385 1.00 0.96 O
ATOM 2 P C B2329 -39.104 118.026 165.415 1.00 18.60 P
ATOM 3 OP1 C B2329 -39.426 116.800 164.638 1.00 29.59 O
ATOM 4 OP2 C B2329 -40.136 118.614 166.332 1.00 29.59 O
ATOM 5 O5' C B2329 -37.770 117.770 166.243 1.00 8.56 O
ATOM 6 C5' C B2329 -36.670 117.097 165.636 1.00 8.56 C
ATOM 7 C4' C B2329 -35.770 116.509 166.689 1.00 8.56 C
ATOM 8 O4' C B2329 -34.951 117.534 167.286 1.00 8.56 O
ATOM 9 C3' C B2329 -36.460 115.837 167.856 1.00 8.56 C
ATOM 10 O3' C B2329 -36.795 114.508 167.509 1.00 8.56 O
ATOM 11 C2' C B2329 -35.387 115.875 168.929 1.00 8.56 C
ATOM 12 O2' C B2329 -34.456 114.845 168.703 1.00 8.56 O
ATOM 13 C1' C B2329 -34.681 117.196 168.625 1.00 8.56 C
ATOM 14 N1 C B2329 -35.066 118.332 169.470 1.00 17.99 N
ATOM 15 C2 C B2329 -34.312 118.620 170.632 1.00 17.99 C
ATOM 16 O2 C B2329 -33.359 117.868 170.959 1.00 17.99 O
ATOM 17 N3 C B2329 -34.637 119.702 171.369 1.00 17.99 N
ATOM 18 C4 C B2329 -35.655 120.475 170.999 1.00 17.99 C
ATOM 19 N4 C B2329 -35.914 121.561 171.734 1.00 17.99 N
ATOM 20 C5 C B2329 -36.449 120.182 169.853 1.00 17.99 C
ATOM 21 C6 C B2329 -36.124 119.114 169.128 1.00 17.99 C
ATOM 22 P A B2330 -38.025 113.790 168.239 1.00 44.37 P
ATOM 23 OP1 A B2330 -38.082 112.401 167.716 1.00 34.98 O
ATOM 24 OP2 A B2330 -39.221 114.654 168.157 1.00 34.98 O
ATOM 25 O5' A B2330 -37.559 113.747 169.755 1.00 12.02 O
TER
Atoms:
C4: (-33.191,121.857,174.476)
N3: (-33.094,120.516,174.177)
OP1: (-30.209,124.633,178.047)
OP2: (-28.068,123.907,179.249)
C2: (-32.403,119.565,174.880)
C1': (-30.934,119.093,176.774)
C3': (-28.690,119.679,176.362)
O5': (-29.399,122.278,177.888)
O4': (-30.439,119.780,177.905)
C5': (-28.584,121.209,178.419)
P: (-28.981,123.807,178.085)
C4': (-28.997,119.886,177.830)
C2': (-29.718,118.635,175.965)
O2': (-29.331,117.327,176.349)
N1: (-31.746,120.039,176.000)
O4: (-33.819,122.599,173.726)
O2: (-32.370,118.390,174.530)
C6: (-31.826,121.357,176.359)
C5: (-32.501,122.256,175.655)
O3': (-27.372,119.220,176.161)
N3: (-33.094,120.516,174.177)
OP1: (-30.209,124.633,178.047)
OP2: (-28.068,123.907,179.249)
C2: (-32.403,119.565,174.880)
C1': (-30.934,119.093,176.774)
C3': (-28.690,119.679,176.362)
O5': (-29.399,122.278,177.888)
O4': (-30.439,119.780,177.905)
C5': (-28.584,121.209,178.419)
P: (-28.981,123.807,178.085)
C4': (-28.997,119.886,177.830)
C2': (-29.718,118.635,175.965)
O2': (-29.331,117.327,176.349)
N1: (-31.746,120.039,176.000)
O4: (-33.819,122.599,173.726)
O2: (-32.370,118.390,174.530)
C6: (-31.826,121.357,176.359)
C5: (-32.501,122.256,175.655)
O3': (-27.372,119.220,176.161)
C2: (-34.312,118.620,170.632)
OP1: (-39.426,116.800,164.638)
OP2: (-40.136,118.614,166.332)
C4: (-35.655,120.475,170.999)
O5': (-37.770,117.770,166.243)
C3': (-36.460,115.837,167.856)
C1': (-34.681,117.196,168.625)
O4': (-34.951,117.534,167.286)
C5': (-36.670,117.097,165.636)
P: (-39.104,118.026,165.415)
O2: (-33.359,117.868,170.959)
C4': (-35.770,116.509,166.689)
C2': (-35.387,115.875,168.929)
O2': (-34.456,114.845,168.703)
N1: (-35.066,118.332,169.470)
N3: (-34.637,119.702,171.369)
N4: (-35.914,121.561,171.734)
C6: (-36.124,119.114,169.128)
C5: (-36.449,120.182,169.853)
O3': (-36.795,114.508,167.509)
OP1: (-39.426,116.800,164.638)
OP2: (-40.136,118.614,166.332)
C4: (-35.655,120.475,170.999)
O5': (-37.770,117.770,166.243)
C3': (-36.460,115.837,167.856)
C1': (-34.681,117.196,168.625)
O4': (-34.951,117.534,167.286)
C5': (-36.670,117.097,165.636)
P: (-39.104,118.026,165.415)
O2: (-33.359,117.868,170.959)
C4': (-35.770,116.509,166.689)
C2': (-35.387,115.875,168.929)
O2': (-34.456,114.845,168.703)
N1: (-35.066,118.332,169.470)
N3: (-34.637,119.702,171.369)
N4: (-35.914,121.561,171.734)
C6: (-36.124,119.114,169.128)
C5: (-36.449,120.182,169.853)
O3': (-36.795,114.508,167.509)
Image (generated by PyMOL):