ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZUF:B35:B33

Extra

PDB:
ATOM 1 O3' U A 34 1.082 5.929 -7.823 1.00 89.82 O
ATOM 2 P C A 35 0.365 6.696 -6.600 1.00 91.50 P
ATOM 3 OP1 C A 35 -0.660 7.604 -7.180 1.00 91.41 O
ATOM 4 OP2 C A 35 1.436 7.257 -5.737 1.00 90.71 O
ATOM 5 O5' C A 35 -0.388 5.559 -5.774 1.00 90.44 O
ATOM 6 C5' C A 35 -1.556 5.868 -5.011 1.00 87.66 C
ATOM 7 C4' C A 35 -1.728 4.877 -3.882 1.00 85.61 C
ATOM 8 O4' C A 35 -1.807 3.543 -4.444 1.00 87.32 O
ATOM 9 C3' C A 35 -0.587 4.796 -2.876 1.00 83.14 C
ATOM 10 O3' C A 35 -0.748 5.757 -1.835 1.00 75.54 O
ATOM 11 C2' C A 35 -0.741 3.387 -2.318 1.00 85.40 C
ATOM 12 O2' C A 35 -1.715 3.307 -1.298 1.00 85.68 O
ATOM 13 C1' C A 35 -1.218 2.614 -3.550 1.00 88.26 C
ATOM 14 N1 C A 35 -0.136 1.906 -4.253 1.00 91.02 N
ATOM 15 C2 C A 35 0.332 0.701 -3.718 1.00 92.68 C
ATOM 16 O2 C A 35 -0.179 0.271 -2.670 1.00 93.10 O
ATOM 17 N3 C A 35 1.325 0.037 -4.354 1.00 94.03 N
ATOM 18 C4 C A 35 1.847 0.534 -5.480 1.00 94.48 C
ATOM 19 N4 C A 35 2.825 -0.155 -6.073 1.00 94.90 N
ATOM 20 C5 C A 35 1.388 1.761 -6.046 1.00 93.32 C
ATOM 21 C6 C A 35 0.405 2.407 -5.405 1.00 92.10 C
ATOM 22 P C A 36 0.550 6.410 -1.146 1.00 71.08 P
ATOM 23 OP1 C A 36 0.446 7.876 -1.370 1.00 70.38 O
ATOM 24 OP2 C A 36 1.766 5.679 -1.599 1.00 71.38 O
ATOM 25 O5' C A 36 0.357 6.155 0.415 1.00 61.95 O
TER

ATOM 1 O3' C B 32 5.117 -4.704 -8.354 1.00 47.18 O
ATOM 2 P C B 33 5.363 -3.354 -9.185 1.00 49.07 P
ATOM 3 OP1 C B 33 4.112 -3.058 -9.930 1.00 49.81 O
ATOM 4 OP2 C B 33 6.643 -3.464 -9.924 1.00 46.49 O
ATOM 5 O5' C B 33 5.545 -2.247 -8.055 1.00 52.63 O
ATOM 6 C5' C B 33 5.851 -0.910 -8.415 1.00 58.13 C
ATOM 7 C4' C B 33 5.419 0.049 -7.336 1.00 61.44 C
ATOM 8 O4' C B 33 6.361 0.014 -6.232 1.00 61.33 O
ATOM 9 C3' C B 33 5.427 1.490 -7.823 1.00 64.77 C
ATOM 10 O3' C B 33 4.136 1.808 -8.334 1.00 69.03 O
ATOM 11 C2' C B 33 5.686 2.294 -6.553 1.00 64.54 C
ATOM 12 O2' C B 33 4.495 2.592 -5.850 1.00 66.71 O
ATOM 13 C1' C B 33 6.529 1.322 -5.726 1.00 62.97 C
ATOM 14 N1 C B 33 7.965 1.607 -5.601 1.00 61.93 N
ATOM 15 C2 C B 33 8.780 1.531 -6.730 1.00 62.08 C
ATOM 16 O2 C B 33 8.271 1.227 -7.815 1.00 63.40 O
ATOM 17 N3 C B 33 10.105 1.786 -6.607 1.00 62.30 N
ATOM 18 C4 C B 33 10.614 2.113 -5.415 1.00 61.34 C
ATOM 19 N4 C B 33 11.924 2.349 -5.332 1.00 60.40 N
ATOM 20 C5 C B 33 9.802 2.211 -4.255 1.00 61.96 C
ATOM 21 C6 C B 33 8.495 1.950 -4.391 1.00 61.91 C
ATOM 22 P U B 34 3.744 1.420 -9.845 1.00 71.87 P
ATOM 23 OP1 U B 34 3.106 0.079 -9.827 1.00 71.44 O
ATOM 24 OP2 U B 34 4.906 1.675 -10.738 1.00 72.17 O
ATOM 25 O5' U B 34 2.608 2.471 -10.184 1.00 74.49 O
TER

Atoms:
C2: (0.332,0.701,-3.718)
OP1: (-0.660,7.604,-7.180)
OP2: (1.436,7.257,-5.737)
C4: (1.847,0.534,-5.480)
O5': (-0.388,5.559,-5.774)
C3': (-0.587,4.796,-2.876)
C1': (-1.218,2.614,-3.550)
O4': (-1.807,3.543,-4.444)
C5': (-1.556,5.868,-5.011)
P: (0.365,6.696,-6.600)
O2: (-0.179,0.271,-2.670)
C4': (-1.728,4.877,-3.882)
C2': (-0.741,3.387,-2.318)
O2': (-1.715,3.307,-1.298)
N1: (-0.136,1.906,-4.253)
N3: (1.325,0.037,-4.354)
N4: (2.825,-0.155,-6.073)
C6: (0.405,2.407,-5.405)
C5: (1.388,1.761,-6.046)
O3': (-0.748,5.757,-1.835)
C2: (8.780,1.531,-6.730)
OP1: (4.112,-3.058,-9.930)
OP2: (6.643,-3.464,-9.924)
C4: (10.614,2.113,-5.415)
O5': (5.545,-2.247,-8.055)
C3': (5.427,1.490,-7.823)
C1': (6.529,1.322,-5.726)
O4': (6.361,0.014,-6.232)
C5': (5.851,-0.910,-8.415)
P: (5.363,-3.354,-9.185)
O2: (8.271,1.227,-7.815)
C4': (5.419,0.049,-7.336)
C2': (5.686,2.294,-6.553)
O2': (4.495,2.592,-5.850)
N1: (7.965,1.607,-5.601)
N3: (10.105,1.786,-6.607)
N4: (11.924,2.349,-5.332)
C6: (8.495,1.950,-4.391)
C5: (9.802,2.211,-4.255)
O3': (4.136,1.808,-8.334)
Image (generated by PyMOL):
PyMOL image
show in jmol