Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2488:A2436
Extra
PDB:
ATOM 1 O3' A A2487 -83.639 -64.971 8.220 1.00 42.82 O
ATOM 2 P U A2488 -84.799 -66.101 8.234 1.00 49.83 P
ATOM 3 OP1 U A2488 -85.795 -65.713 9.272 1.00 59.74 O
ATOM 4 OP2 U A2488 -84.197 -67.476 8.278 1.00 38.50 O
ATOM 5 O5' U A2488 -85.398 -65.878 6.766 1.00 38.77 O
ATOM 6 C5' U A2488 -84.758 -66.556 5.692 1.00 44.37 C
ATOM 7 C4' U A2488 -85.004 -65.868 4.362 1.00 50.52 C
ATOM 8 O4' U A2488 -86.414 -65.850 4.025 1.00 55.67 O
ATOM 9 C3' U A2488 -84.621 -64.405 4.339 1.00 50.72 C
ATOM 10 O3' U A2488 -83.228 -64.259 4.102 1.00 50.41 O
ATOM 11 C2' U A2488 -85.447 -63.914 3.159 1.00 54.59 C
ATOM 12 O2' U A2488 -84.928 -64.349 1.923 1.00 65.78 O
ATOM 13 C1' U A2488 -86.766 -64.614 3.443 1.00 51.42 C
ATOM 14 N1 U A2488 -87.590 -63.895 4.438 1.00 49.18 N
ATOM 15 C2 U A2488 -88.231 -62.717 4.087 1.00 53.93 C
ATOM 16 O2 U A2488 -88.166 -62.208 2.976 1.00 53.78 O
ATOM 17 N3 U A2488 -88.960 -62.139 5.101 1.00 52.76 N
ATOM 18 C4 U A2488 -89.097 -62.605 6.399 1.00 54.94 C
ATOM 19 O4 U A2488 -89.778 -61.985 7.213 1.00 63.53 O
ATOM 20 C5 U A2488 -88.395 -63.833 6.677 1.00 54.50 C
ATOM 21 C6 U A2488 -87.684 -64.419 5.709 1.00 53.83 C
ATOM 22 P G A2489 -82.578 -62.837 4.437 1.00 36.83 P
ATOM 23 OP1 G A2489 -81.109 -62.957 4.657 1.00 36.65 O
ATOM 24 OP2 G A2489 -83.440 -62.260 5.519 1.00 40.34 O
ATOM 25 O5' G A2489 -82.872 -62.102 3.040 1.00 41.38 O
TER
ATOM 1 O3' A B2435 -94.262 -52.305 4.444 1.00 42.84 O
ATOM 2 P C B2436 -94.906 -53.286 3.361 1.00 47.63 P
ATOM 3 OP1 C B2436 -95.431 -52.536 2.172 1.00 32.42 O
ATOM 4 OP2 C B2436 -95.763 -54.206 4.161 1.00 43.42 O
ATOM 5 O5' C B2436 -93.646 -54.143 2.900 1.00 47.86 O
ATOM 6 C5' C B2436 -92.602 -53.578 2.143 1.00 55.98 C
ATOM 7 C4' C B2436 -91.693 -54.678 1.621 1.00 45.17 C
ATOM 8 O4' C B2436 -90.973 -55.272 2.719 1.00 37.85 O
ATOM 9 C3' C B2436 -92.410 -55.855 0.986 1.00 39.94 C
ATOM 10 O3' C B2436 -92.712 -55.568 -0.372 1.00 44.30 O
ATOM 11 C2' C B2436 -91.375 -56.969 1.111 1.00 42.19 C
ATOM 12 O2' C B2436 -90.440 -56.953 0.054 1.00 52.87 O
ATOM 13 C1' C B2436 -90.657 -56.615 2.405 1.00 38.57 C
ATOM 14 N1 C B2436 -90.997 -57.436 3.607 1.00 31.32 N
ATOM 15 C2 C B2436 -90.416 -58.693 3.823 1.00 38.19 C
ATOM 16 O2 C B2436 -89.619 -59.162 2.986 1.00 39.72 O
ATOM 17 N3 C B2436 -90.758 -59.370 4.950 1.00 43.76 N
ATOM 18 C4 C B2436 -91.609 -58.844 5.828 1.00 41.47 C
ATOM 19 N4 C B2436 -91.916 -59.541 6.926 1.00 44.55 N
ATOM 20 C5 C B2436 -92.186 -57.569 5.623 1.00 37.33 C
ATOM 21 C6 C B2436 -91.855 -56.909 4.518 1.00 35.43 C
ATOM 22 P A B2437 -94.119 -56.016 -0.993 1.00 52.70 P
ATOM 23 OP1 A B2437 -94.259 -55.369 -2.324 1.00 62.84 O
ATOM 24 OP2 A B2437 -95.151 -55.805 0.054 1.00 48.50 O
ATOM 25 O5' A B2437 -93.927 -57.587 -1.239 1.00 42.73 O
TER
ATOM 2 P U A2488 -84.799 -66.101 8.234 1.00 49.83 P
ATOM 3 OP1 U A2488 -85.795 -65.713 9.272 1.00 59.74 O
ATOM 4 OP2 U A2488 -84.197 -67.476 8.278 1.00 38.50 O
ATOM 5 O5' U A2488 -85.398 -65.878 6.766 1.00 38.77 O
ATOM 6 C5' U A2488 -84.758 -66.556 5.692 1.00 44.37 C
ATOM 7 C4' U A2488 -85.004 -65.868 4.362 1.00 50.52 C
ATOM 8 O4' U A2488 -86.414 -65.850 4.025 1.00 55.67 O
ATOM 9 C3' U A2488 -84.621 -64.405 4.339 1.00 50.72 C
ATOM 10 O3' U A2488 -83.228 -64.259 4.102 1.00 50.41 O
ATOM 11 C2' U A2488 -85.447 -63.914 3.159 1.00 54.59 C
ATOM 12 O2' U A2488 -84.928 -64.349 1.923 1.00 65.78 O
ATOM 13 C1' U A2488 -86.766 -64.614 3.443 1.00 51.42 C
ATOM 14 N1 U A2488 -87.590 -63.895 4.438 1.00 49.18 N
ATOM 15 C2 U A2488 -88.231 -62.717 4.087 1.00 53.93 C
ATOM 16 O2 U A2488 -88.166 -62.208 2.976 1.00 53.78 O
ATOM 17 N3 U A2488 -88.960 -62.139 5.101 1.00 52.76 N
ATOM 18 C4 U A2488 -89.097 -62.605 6.399 1.00 54.94 C
ATOM 19 O4 U A2488 -89.778 -61.985 7.213 1.00 63.53 O
ATOM 20 C5 U A2488 -88.395 -63.833 6.677 1.00 54.50 C
ATOM 21 C6 U A2488 -87.684 -64.419 5.709 1.00 53.83 C
ATOM 22 P G A2489 -82.578 -62.837 4.437 1.00 36.83 P
ATOM 23 OP1 G A2489 -81.109 -62.957 4.657 1.00 36.65 O
ATOM 24 OP2 G A2489 -83.440 -62.260 5.519 1.00 40.34 O
ATOM 25 O5' G A2489 -82.872 -62.102 3.040 1.00 41.38 O
TER
ATOM 1 O3' A B2435 -94.262 -52.305 4.444 1.00 42.84 O
ATOM 2 P C B2436 -94.906 -53.286 3.361 1.00 47.63 P
ATOM 3 OP1 C B2436 -95.431 -52.536 2.172 1.00 32.42 O
ATOM 4 OP2 C B2436 -95.763 -54.206 4.161 1.00 43.42 O
ATOM 5 O5' C B2436 -93.646 -54.143 2.900 1.00 47.86 O
ATOM 6 C5' C B2436 -92.602 -53.578 2.143 1.00 55.98 C
ATOM 7 C4' C B2436 -91.693 -54.678 1.621 1.00 45.17 C
ATOM 8 O4' C B2436 -90.973 -55.272 2.719 1.00 37.85 O
ATOM 9 C3' C B2436 -92.410 -55.855 0.986 1.00 39.94 C
ATOM 10 O3' C B2436 -92.712 -55.568 -0.372 1.00 44.30 O
ATOM 11 C2' C B2436 -91.375 -56.969 1.111 1.00 42.19 C
ATOM 12 O2' C B2436 -90.440 -56.953 0.054 1.00 52.87 O
ATOM 13 C1' C B2436 -90.657 -56.615 2.405 1.00 38.57 C
ATOM 14 N1 C B2436 -90.997 -57.436 3.607 1.00 31.32 N
ATOM 15 C2 C B2436 -90.416 -58.693 3.823 1.00 38.19 C
ATOM 16 O2 C B2436 -89.619 -59.162 2.986 1.00 39.72 O
ATOM 17 N3 C B2436 -90.758 -59.370 4.950 1.00 43.76 N
ATOM 18 C4 C B2436 -91.609 -58.844 5.828 1.00 41.47 C
ATOM 19 N4 C B2436 -91.916 -59.541 6.926 1.00 44.55 N
ATOM 20 C5 C B2436 -92.186 -57.569 5.623 1.00 37.33 C
ATOM 21 C6 C B2436 -91.855 -56.909 4.518 1.00 35.43 C
ATOM 22 P A B2437 -94.119 -56.016 -0.993 1.00 52.70 P
ATOM 23 OP1 A B2437 -94.259 -55.369 -2.324 1.00 62.84 O
ATOM 24 OP2 A B2437 -95.151 -55.805 0.054 1.00 48.50 O
ATOM 25 O5' A B2437 -93.927 -57.587 -1.239 1.00 42.73 O
TER
Atoms:
C4: (-89.097,-62.605,6.399)
N3: (-88.960,-62.139,5.101)
OP1: (-85.795,-65.713,9.272)
OP2: (-84.197,-67.476,8.278)
C2: (-88.231,-62.717,4.087)
C1': (-86.766,-64.614,3.443)
C3': (-84.621,-64.405,4.339)
O5': (-85.398,-65.878,6.766)
O4': (-86.414,-65.850,4.025)
C5': (-84.758,-66.556,5.692)
P: (-84.799,-66.101,8.234)
C4': (-85.004,-65.868,4.362)
C2': (-85.447,-63.914,3.159)
O2': (-84.928,-64.349,1.923)
N1: (-87.590,-63.895,4.438)
O4: (-89.778,-61.985,7.213)
O2: (-88.166,-62.208,2.976)
C6: (-87.684,-64.419,5.709)
C5: (-88.395,-63.833,6.677)
O3': (-83.228,-64.259,4.102)
N3: (-88.960,-62.139,5.101)
OP1: (-85.795,-65.713,9.272)
OP2: (-84.197,-67.476,8.278)
C2: (-88.231,-62.717,4.087)
C1': (-86.766,-64.614,3.443)
C3': (-84.621,-64.405,4.339)
O5': (-85.398,-65.878,6.766)
O4': (-86.414,-65.850,4.025)
C5': (-84.758,-66.556,5.692)
P: (-84.799,-66.101,8.234)
C4': (-85.004,-65.868,4.362)
C2': (-85.447,-63.914,3.159)
O2': (-84.928,-64.349,1.923)
N1: (-87.590,-63.895,4.438)
O4: (-89.778,-61.985,7.213)
O2: (-88.166,-62.208,2.976)
C6: (-87.684,-64.419,5.709)
C5: (-88.395,-63.833,6.677)
O3': (-83.228,-64.259,4.102)
C2: (-90.416,-58.693,3.823)
OP1: (-95.431,-52.536,2.172)
OP2: (-95.763,-54.206,4.161)
C4: (-91.609,-58.844,5.828)
O5': (-93.646,-54.143,2.900)
C3': (-92.410,-55.855,0.986)
C1': (-90.657,-56.615,2.405)
O4': (-90.973,-55.272,2.719)
C5': (-92.602,-53.578,2.143)
P: (-94.906,-53.286,3.361)
O2: (-89.619,-59.162,2.986)
C4': (-91.693,-54.678,1.621)
C2': (-91.375,-56.969,1.111)
O2': (-90.440,-56.953,0.054)
N1: (-90.997,-57.436,3.607)
N3: (-90.758,-59.370,4.950)
N4: (-91.916,-59.541,6.926)
C6: (-91.855,-56.909,4.518)
C5: (-92.186,-57.569,5.623)
O3': (-92.712,-55.568,-0.372)
OP1: (-95.431,-52.536,2.172)
OP2: (-95.763,-54.206,4.161)
C4: (-91.609,-58.844,5.828)
O5': (-93.646,-54.143,2.900)
C3': (-92.410,-55.855,0.986)
C1': (-90.657,-56.615,2.405)
O4': (-90.973,-55.272,2.719)
C5': (-92.602,-53.578,2.143)
P: (-94.906,-53.286,3.361)
O2: (-89.619,-59.162,2.986)
C4': (-91.693,-54.678,1.621)
C2': (-91.375,-56.969,1.111)
O2': (-90.440,-56.953,0.054)
N1: (-90.997,-57.436,3.607)
N3: (-90.758,-59.370,4.950)
N4: (-91.916,-59.541,6.926)
C6: (-91.855,-56.909,4.518)
C5: (-92.186,-57.569,5.623)
O3': (-92.712,-55.568,-0.372)
Image (generated by PyMOL):