Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11709:11705
Extra
PDB:
ATOM 1 O3' U A1708 53.251 61.838 128.842 1.00283.17 O
ATOM 2 P U A1709 51.892 61.833 129.746 1.00225.92 P
ATOM 3 OP1 U A1709 52.108 62.716 130.914 1.00226.86 O
ATOM 4 OP2 U A1709 51.562 60.413 130.001 1.00225.37 O
ATOM 5 O5' U A1709 50.774 62.467 128.785 1.00225.73 O
ATOM 6 C5' U A1709 50.996 63.662 128.034 1.00225.98 C
ATOM 7 C4' U A1709 51.399 64.827 128.909 1.00226.94 C
ATOM 8 O4' U A1709 52.228 65.744 128.155 1.00227.11 O
ATOM 9 C3' U A1709 50.278 65.701 129.444 1.00227.53 C
ATOM 10 O3' U A1709 49.636 65.135 130.578 1.00227.72 O
ATOM 11 C2' U A1709 50.995 67.021 129.744 1.00228.35 C
ATOM 12 O2' U A1709 51.618 66.983 131.022 1.00228.93 O
ATOM 13 C1' U A1709 52.089 67.049 128.672 1.00227.96 C
ATOM 14 N1 U A1709 51.770 67.975 127.568 1.00227.93 N
ATOM 15 C2 U A1709 52.339 69.238 127.631 1.00228.62 C
ATOM 16 O2 U A1709 53.079 69.605 128.530 1.00229.24 O
ATOM 17 N3 U A1709 52.011 70.058 126.583 1.00228.58 N
ATOM 18 C4 U A1709 51.189 69.745 125.516 1.00227.92 C
ATOM 19 O4 U A1709 50.988 70.594 124.648 1.00227.99 O
ATOM 20 C5 U A1709 50.641 68.422 125.530 1.00227.23 C
ATOM 21 C6 U A1709 50.943 67.598 126.535 1.00227.25 C
ATOM 22 P G A1710 48.038 64.948 130.608 1.00196.26 P
ATOM 23 OP1 G A1710 47.753 63.520 130.293 1.00195.42 O
ATOM 24 OP2 G A1710 47.458 66.002 129.734 1.00196.36 O
ATOM 25 O5' G A1710 47.680 65.248 132.131 1.00197.06 O
TER
ATOM 1 O3' A B1704 52.960 79.245 128.942 1.00163.20 O
ATOM 2 P C B1705 54.127 78.911 127.881 1.00234.91 P
ATOM 3 OP1 C B1705 55.338 79.658 128.309 1.00235.61 O
ATOM 4 OP2 C B1705 53.575 79.168 126.525 1.00234.44 O
ATOM 5 O5' C B1705 54.355 77.348 128.089 1.00234.14 O
ATOM 6 C5' C B1705 55.521 76.848 128.742 1.00234.23 C
ATOM 7 C4' C B1705 56.059 75.626 128.039 1.00233.29 C
ATOM 8 O4' C B1705 54.934 74.797 127.615 1.00232.57 O
ATOM 9 C3' C B1705 56.857 75.916 126.771 1.00232.96 C
ATOM 10 O3' C B1705 57.802 74.867 126.560 1.00232.38 O
ATOM 11 C2' C B1705 55.772 75.859 125.703 1.00232.40 C
ATOM 12 O2' C B1705 56.226 75.664 124.380 1.00231.77 O
ATOM 13 C1' C B1705 54.927 74.692 126.199 1.00231.91 C
ATOM 14 N1 C B1705 53.525 74.744 125.722 1.00231.64 N
ATOM 15 C2 C B1705 52.715 73.602 125.662 1.00230.95 C
ATOM 16 O2 C B1705 53.153 72.511 126.068 1.00230.57 O
ATOM 17 N3 C B1705 51.451 73.737 125.183 1.00230.75 N
ATOM 18 C4 C B1705 50.999 74.924 124.755 1.00231.19 C
ATOM 19 N4 C B1705 49.750 75.009 124.287 1.00230.99 N
ATOM 20 C5 C B1705 51.812 76.090 124.784 1.00231.88 C
ATOM 21 C6 C B1705 53.053 75.945 125.260 1.00232.07 C
ATOM 22 P C B1706 58.827 74.932 125.323 1.00260.61 P
ATOM 23 OP1 C B1706 60.152 74.508 125.834 1.00260.72 O
ATOM 24 OP2 C B1706 58.695 76.278 124.712 1.00261.08 O
ATOM 25 O5' C B1706 58.247 73.831 124.333 1.00259.56 O
TER
ATOM 2 P U A1709 51.892 61.833 129.746 1.00225.92 P
ATOM 3 OP1 U A1709 52.108 62.716 130.914 1.00226.86 O
ATOM 4 OP2 U A1709 51.562 60.413 130.001 1.00225.37 O
ATOM 5 O5' U A1709 50.774 62.467 128.785 1.00225.73 O
ATOM 6 C5' U A1709 50.996 63.662 128.034 1.00225.98 C
ATOM 7 C4' U A1709 51.399 64.827 128.909 1.00226.94 C
ATOM 8 O4' U A1709 52.228 65.744 128.155 1.00227.11 O
ATOM 9 C3' U A1709 50.278 65.701 129.444 1.00227.53 C
ATOM 10 O3' U A1709 49.636 65.135 130.578 1.00227.72 O
ATOM 11 C2' U A1709 50.995 67.021 129.744 1.00228.35 C
ATOM 12 O2' U A1709 51.618 66.983 131.022 1.00228.93 O
ATOM 13 C1' U A1709 52.089 67.049 128.672 1.00227.96 C
ATOM 14 N1 U A1709 51.770 67.975 127.568 1.00227.93 N
ATOM 15 C2 U A1709 52.339 69.238 127.631 1.00228.62 C
ATOM 16 O2 U A1709 53.079 69.605 128.530 1.00229.24 O
ATOM 17 N3 U A1709 52.011 70.058 126.583 1.00228.58 N
ATOM 18 C4 U A1709 51.189 69.745 125.516 1.00227.92 C
ATOM 19 O4 U A1709 50.988 70.594 124.648 1.00227.99 O
ATOM 20 C5 U A1709 50.641 68.422 125.530 1.00227.23 C
ATOM 21 C6 U A1709 50.943 67.598 126.535 1.00227.25 C
ATOM 22 P G A1710 48.038 64.948 130.608 1.00196.26 P
ATOM 23 OP1 G A1710 47.753 63.520 130.293 1.00195.42 O
ATOM 24 OP2 G A1710 47.458 66.002 129.734 1.00196.36 O
ATOM 25 O5' G A1710 47.680 65.248 132.131 1.00197.06 O
TER
ATOM 1 O3' A B1704 52.960 79.245 128.942 1.00163.20 O
ATOM 2 P C B1705 54.127 78.911 127.881 1.00234.91 P
ATOM 3 OP1 C B1705 55.338 79.658 128.309 1.00235.61 O
ATOM 4 OP2 C B1705 53.575 79.168 126.525 1.00234.44 O
ATOM 5 O5' C B1705 54.355 77.348 128.089 1.00234.14 O
ATOM 6 C5' C B1705 55.521 76.848 128.742 1.00234.23 C
ATOM 7 C4' C B1705 56.059 75.626 128.039 1.00233.29 C
ATOM 8 O4' C B1705 54.934 74.797 127.615 1.00232.57 O
ATOM 9 C3' C B1705 56.857 75.916 126.771 1.00232.96 C
ATOM 10 O3' C B1705 57.802 74.867 126.560 1.00232.38 O
ATOM 11 C2' C B1705 55.772 75.859 125.703 1.00232.40 C
ATOM 12 O2' C B1705 56.226 75.664 124.380 1.00231.77 O
ATOM 13 C1' C B1705 54.927 74.692 126.199 1.00231.91 C
ATOM 14 N1 C B1705 53.525 74.744 125.722 1.00231.64 N
ATOM 15 C2 C B1705 52.715 73.602 125.662 1.00230.95 C
ATOM 16 O2 C B1705 53.153 72.511 126.068 1.00230.57 O
ATOM 17 N3 C B1705 51.451 73.737 125.183 1.00230.75 N
ATOM 18 C4 C B1705 50.999 74.924 124.755 1.00231.19 C
ATOM 19 N4 C B1705 49.750 75.009 124.287 1.00230.99 N
ATOM 20 C5 C B1705 51.812 76.090 124.784 1.00231.88 C
ATOM 21 C6 C B1705 53.053 75.945 125.260 1.00232.07 C
ATOM 22 P C B1706 58.827 74.932 125.323 1.00260.61 P
ATOM 23 OP1 C B1706 60.152 74.508 125.834 1.00260.72 O
ATOM 24 OP2 C B1706 58.695 76.278 124.712 1.00261.08 O
ATOM 25 O5' C B1706 58.247 73.831 124.333 1.00259.56 O
TER
Atoms:
C4: (51.189,69.745,125.516)
N3: (52.011,70.058,126.583)
OP1: (52.108,62.716,130.914)
OP2: (51.562,60.413,130.001)
C2: (52.339,69.238,127.631)
C1': (52.089,67.049,128.672)
C3': (50.278,65.701,129.444)
O5': (50.774,62.467,128.785)
O4': (52.228,65.744,128.155)
C5': (50.996,63.662,128.034)
P: (51.892,61.833,129.746)
C4': (51.399,64.827,128.909)
C2': (50.995,67.021,129.744)
O2': (51.618,66.983,131.022)
N1: (51.770,67.975,127.568)
O4: (50.988,70.594,124.648)
O2: (53.079,69.605,128.530)
C6: (50.943,67.598,126.535)
C5: (50.641,68.422,125.530)
O3': (49.636,65.135,130.578)
N3: (52.011,70.058,126.583)
OP1: (52.108,62.716,130.914)
OP2: (51.562,60.413,130.001)
C2: (52.339,69.238,127.631)
C1': (52.089,67.049,128.672)
C3': (50.278,65.701,129.444)
O5': (50.774,62.467,128.785)
O4': (52.228,65.744,128.155)
C5': (50.996,63.662,128.034)
P: (51.892,61.833,129.746)
C4': (51.399,64.827,128.909)
C2': (50.995,67.021,129.744)
O2': (51.618,66.983,131.022)
N1: (51.770,67.975,127.568)
O4: (50.988,70.594,124.648)
O2: (53.079,69.605,128.530)
C6: (50.943,67.598,126.535)
C5: (50.641,68.422,125.530)
O3': (49.636,65.135,130.578)
C2: (52.715,73.602,125.662)
OP1: (55.338,79.658,128.309)
OP2: (53.575,79.168,126.525)
C4: (50.999,74.924,124.755)
O5': (54.355,77.348,128.089)
C3': (56.857,75.916,126.771)
C1': (54.927,74.692,126.199)
O4': (54.934,74.797,127.615)
C5': (55.521,76.848,128.742)
P: (54.127,78.911,127.881)
O2: (53.153,72.511,126.068)
C4': (56.059,75.626,128.039)
C2': (55.772,75.859,125.703)
O2': (56.226,75.664,124.380)
N1: (53.525,74.744,125.722)
N3: (51.451,73.737,125.183)
N4: (49.750,75.009,124.287)
C6: (53.053,75.945,125.260)
C5: (51.812,76.090,124.784)
O3': (57.802,74.867,126.560)
OP1: (55.338,79.658,128.309)
OP2: (53.575,79.168,126.525)
C4: (50.999,74.924,124.755)
O5': (54.355,77.348,128.089)
C3': (56.857,75.916,126.771)
C1': (54.927,74.692,126.199)
O4': (54.934,74.797,127.615)
C5': (55.521,76.848,128.742)
P: (54.127,78.911,127.881)
O2: (53.153,72.511,126.068)
C4': (56.059,75.626,128.039)
C2': (55.772,75.859,125.703)
O2': (56.226,75.664,124.380)
N1: (53.525,74.744,125.722)
N3: (51.451,73.737,125.183)
N4: (49.750,75.009,124.287)
C6: (53.053,75.945,125.260)
C5: (51.812,76.090,124.784)
O3': (57.802,74.867,126.560)
Image (generated by PyMOL):