Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12887:12851
Extra
PDB:
ATOM 1 O3' A A2886 36.130 41.686 22.967 1.00 59.19 O
ATOM 2 P U A2887 36.301 42.724 24.145 1.00 52.83 P
ATOM 3 OP1 U A2887 37.565 43.539 23.827 1.00 53.07 O
ATOM 4 OP2 U A2887 36.222 41.939 25.426 1.00 52.28 O
ATOM 5 O5' U A2887 35.005 43.647 23.955 1.00 53.28 O
ATOM 6 C5' U A2887 34.889 44.453 22.787 1.00 53.84 C
ATOM 7 C4' U A2887 33.631 45.270 22.755 1.00 54.22 C
ATOM 8 O4' U A2887 32.478 44.409 22.697 1.00 54.07 O
ATOM 9 C3' U A2887 33.359 46.131 23.956 1.00 54.23 C
ATOM 10 O3' U A2887 34.138 47.289 23.990 1.00 54.54 O
ATOM 11 C2' U A2887 31.881 46.401 23.814 1.00 54.50 C
ATOM 12 O2' U A2887 31.652 47.371 22.814 1.00 55.10 O
ATOM 13 C1' U A2887 31.384 45.060 23.295 1.00 54.24 C
ATOM 14 N1 U A2887 30.892 44.232 24.376 1.00 53.74 N
ATOM 15 C2 U A2887 29.660 44.548 24.967 1.00 53.83 C
ATOM 16 O2 U A2887 28.931 45.475 24.626 1.00 54.30 O
ATOM 17 N3 U A2887 29.324 43.711 25.993 1.00 53.34 N
ATOM 18 C4 U A2887 30.075 42.654 26.425 1.00 52.83 C
ATOM 19 O4 U A2887 29.682 41.979 27.363 1.00 52.44 O
ATOM 20 C5 U A2887 31.299 42.422 25.745 1.00 52.79 C
ATOM 21 C6 U A2887 31.678 43.207 24.769 1.00 53.24 C
ATOM 22 P G A2888 34.871 47.691 25.343 1.00 52.32 P
ATOM 23 OP1 G A2888 35.407 49.061 25.159 1.00 52.80 O
ATOM 24 OP2 G A2888 35.802 46.593 25.693 1.00 51.79 O
ATOM 25 O5' G A2888 33.701 47.712 26.382 1.00 52.19 O
TER
ATOM 1 O3' G B2850 21.525 47.723 31.366 1.00 47.30 O
ATOM 2 P C B2851 20.656 47.065 30.195 1.00 53.13 P
ATOM 3 OP1 C B2851 19.353 47.750 30.200 1.00 53.57 O
ATOM 4 OP2 C B2851 20.707 45.604 30.392 1.00 52.58 O
ATOM 5 O5' C B2851 21.457 47.465 28.880 1.00 53.45 O
ATOM 6 C5' C B2851 21.696 48.825 28.570 1.00 53.97 C
ATOM 7 C4' C B2851 22.934 48.995 27.737 1.00 54.04 C
ATOM 8 O4' C B2851 24.070 48.447 28.443 1.00 53.53 O
ATOM 9 C3' C B2851 22.952 48.259 26.416 1.00 54.10 C
ATOM 10 O3' C B2851 22.252 48.937 25.404 1.00 54.68 O
ATOM 11 C2' C B2851 24.439 48.115 26.121 1.00 53.91 C
ATOM 12 O2' C B2851 24.928 49.290 25.536 1.00 54.41 O
ATOM 13 C1' C B2851 25.038 48.004 27.518 1.00 53.46 C
ATOM 14 N1 C B2851 25.445 46.627 27.848 1.00 52.86 N
ATOM 15 C2 C B2851 26.619 46.195 27.251 1.00 52.71 C
ATOM 16 O2 C B2851 27.216 46.993 26.517 1.00 53.08 O
ATOM 17 N3 C B2851 27.091 44.941 27.480 1.00 52.18 N
ATOM 18 C4 C B2851 26.435 44.115 28.277 1.00 51.80 C
ATOM 19 N4 C B2851 26.945 42.916 28.460 1.00 51.32 N
ATOM 20 C5 C B2851 25.243 44.528 28.920 1.00 51.94 C
ATOM 21 C6 C B2851 24.786 45.772 28.680 1.00 52.46 C
ATOM 22 P U B2852 21.367 48.115 24.347 1.00 59.35 P
ATOM 23 OP1 U B2852 20.285 49.033 23.892 1.00 59.95 O
ATOM 24 OP2 U B2852 20.996 46.825 24.974 1.00 58.79 O
ATOM 25 O5' U B2852 22.383 47.858 23.165 1.00 59.41 O
TER
ATOM 2 P U A2887 36.301 42.724 24.145 1.00 52.83 P
ATOM 3 OP1 U A2887 37.565 43.539 23.827 1.00 53.07 O
ATOM 4 OP2 U A2887 36.222 41.939 25.426 1.00 52.28 O
ATOM 5 O5' U A2887 35.005 43.647 23.955 1.00 53.28 O
ATOM 6 C5' U A2887 34.889 44.453 22.787 1.00 53.84 C
ATOM 7 C4' U A2887 33.631 45.270 22.755 1.00 54.22 C
ATOM 8 O4' U A2887 32.478 44.409 22.697 1.00 54.07 O
ATOM 9 C3' U A2887 33.359 46.131 23.956 1.00 54.23 C
ATOM 10 O3' U A2887 34.138 47.289 23.990 1.00 54.54 O
ATOM 11 C2' U A2887 31.881 46.401 23.814 1.00 54.50 C
ATOM 12 O2' U A2887 31.652 47.371 22.814 1.00 55.10 O
ATOM 13 C1' U A2887 31.384 45.060 23.295 1.00 54.24 C
ATOM 14 N1 U A2887 30.892 44.232 24.376 1.00 53.74 N
ATOM 15 C2 U A2887 29.660 44.548 24.967 1.00 53.83 C
ATOM 16 O2 U A2887 28.931 45.475 24.626 1.00 54.30 O
ATOM 17 N3 U A2887 29.324 43.711 25.993 1.00 53.34 N
ATOM 18 C4 U A2887 30.075 42.654 26.425 1.00 52.83 C
ATOM 19 O4 U A2887 29.682 41.979 27.363 1.00 52.44 O
ATOM 20 C5 U A2887 31.299 42.422 25.745 1.00 52.79 C
ATOM 21 C6 U A2887 31.678 43.207 24.769 1.00 53.24 C
ATOM 22 P G A2888 34.871 47.691 25.343 1.00 52.32 P
ATOM 23 OP1 G A2888 35.407 49.061 25.159 1.00 52.80 O
ATOM 24 OP2 G A2888 35.802 46.593 25.693 1.00 51.79 O
ATOM 25 O5' G A2888 33.701 47.712 26.382 1.00 52.19 O
TER
ATOM 1 O3' G B2850 21.525 47.723 31.366 1.00 47.30 O
ATOM 2 P C B2851 20.656 47.065 30.195 1.00 53.13 P
ATOM 3 OP1 C B2851 19.353 47.750 30.200 1.00 53.57 O
ATOM 4 OP2 C B2851 20.707 45.604 30.392 1.00 52.58 O
ATOM 5 O5' C B2851 21.457 47.465 28.880 1.00 53.45 O
ATOM 6 C5' C B2851 21.696 48.825 28.570 1.00 53.97 C
ATOM 7 C4' C B2851 22.934 48.995 27.737 1.00 54.04 C
ATOM 8 O4' C B2851 24.070 48.447 28.443 1.00 53.53 O
ATOM 9 C3' C B2851 22.952 48.259 26.416 1.00 54.10 C
ATOM 10 O3' C B2851 22.252 48.937 25.404 1.00 54.68 O
ATOM 11 C2' C B2851 24.439 48.115 26.121 1.00 53.91 C
ATOM 12 O2' C B2851 24.928 49.290 25.536 1.00 54.41 O
ATOM 13 C1' C B2851 25.038 48.004 27.518 1.00 53.46 C
ATOM 14 N1 C B2851 25.445 46.627 27.848 1.00 52.86 N
ATOM 15 C2 C B2851 26.619 46.195 27.251 1.00 52.71 C
ATOM 16 O2 C B2851 27.216 46.993 26.517 1.00 53.08 O
ATOM 17 N3 C B2851 27.091 44.941 27.480 1.00 52.18 N
ATOM 18 C4 C B2851 26.435 44.115 28.277 1.00 51.80 C
ATOM 19 N4 C B2851 26.945 42.916 28.460 1.00 51.32 N
ATOM 20 C5 C B2851 25.243 44.528 28.920 1.00 51.94 C
ATOM 21 C6 C B2851 24.786 45.772 28.680 1.00 52.46 C
ATOM 22 P U B2852 21.367 48.115 24.347 1.00 59.35 P
ATOM 23 OP1 U B2852 20.285 49.033 23.892 1.00 59.95 O
ATOM 24 OP2 U B2852 20.996 46.825 24.974 1.00 58.79 O
ATOM 25 O5' U B2852 22.383 47.858 23.165 1.00 59.41 O
TER
Atoms:
C4: (30.075,42.654,26.425)
N3: (29.324,43.711,25.993)
OP1: (37.565,43.539,23.827)
OP2: (36.222,41.939,25.426)
C2: (29.660,44.548,24.967)
C1': (31.384,45.060,23.295)
C3': (33.359,46.131,23.956)
O5': (35.005,43.647,23.955)
O4': (32.478,44.409,22.697)
C5': (34.889,44.453,22.787)
P: (36.301,42.724,24.145)
C4': (33.631,45.270,22.755)
C2': (31.881,46.401,23.814)
O2': (31.652,47.371,22.814)
N1: (30.892,44.232,24.376)
O4: (29.682,41.979,27.363)
O2: (28.931,45.475,24.626)
C6: (31.678,43.207,24.769)
C5: (31.299,42.422,25.745)
O3': (34.138,47.289,23.990)
N3: (29.324,43.711,25.993)
OP1: (37.565,43.539,23.827)
OP2: (36.222,41.939,25.426)
C2: (29.660,44.548,24.967)
C1': (31.384,45.060,23.295)
C3': (33.359,46.131,23.956)
O5': (35.005,43.647,23.955)
O4': (32.478,44.409,22.697)
C5': (34.889,44.453,22.787)
P: (36.301,42.724,24.145)
C4': (33.631,45.270,22.755)
C2': (31.881,46.401,23.814)
O2': (31.652,47.371,22.814)
N1: (30.892,44.232,24.376)
O4: (29.682,41.979,27.363)
O2: (28.931,45.475,24.626)
C6: (31.678,43.207,24.769)
C5: (31.299,42.422,25.745)
O3': (34.138,47.289,23.990)
C2: (26.619,46.195,27.251)
OP1: (19.353,47.750,30.200)
OP2: (20.707,45.604,30.392)
C4: (26.435,44.115,28.277)
O5': (21.457,47.465,28.880)
C3': (22.952,48.259,26.416)
C1': (25.038,48.004,27.518)
O4': (24.070,48.447,28.443)
C5': (21.696,48.825,28.570)
P: (20.656,47.065,30.195)
O2: (27.216,46.993,26.517)
C4': (22.934,48.995,27.737)
C2': (24.439,48.115,26.121)
O2': (24.928,49.290,25.536)
N1: (25.445,46.627,27.848)
N3: (27.091,44.941,27.480)
N4: (26.945,42.916,28.460)
C6: (24.786,45.772,28.680)
C5: (25.243,44.528,28.920)
O3': (22.252,48.937,25.404)
OP1: (19.353,47.750,30.200)
OP2: (20.707,45.604,30.392)
C4: (26.435,44.115,28.277)
O5': (21.457,47.465,28.880)
C3': (22.952,48.259,26.416)
C1': (25.038,48.004,27.518)
O4': (24.070,48.447,28.443)
C5': (21.696,48.825,28.570)
P: (20.656,47.065,30.195)
O2: (27.216,46.993,26.517)
C4': (22.934,48.995,27.737)
C2': (24.439,48.115,26.121)
O2': (24.928,49.290,25.536)
N1: (25.445,46.627,27.848)
N3: (27.091,44.941,27.480)
N4: (26.945,42.916,28.460)
C6: (24.786,45.772,28.680)
C5: (25.243,44.528,28.920)
O3': (22.252,48.937,25.404)
Image (generated by PyMOL):