Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1951:1987
Extra
PDB:
ATOM 1 O3' A A 950 7.264 -35.750 26.671 1.00 57.36 O
ATOM 2 P U A 951 5.810 -35.927 25.994 1.00 52.72 P
ATOM 3 OP1 U A 951 4.877 -35.047 26.721 1.00 52.54 O
ATOM 4 OP2 U A 951 5.524 -37.374 25.945 1.00 53.04 O
ATOM 5 O5' U A 951 6.042 -35.391 24.521 1.00 53.01 O
ATOM 6 C5' U A 951 6.573 -34.110 24.305 1.00 52.77 C
ATOM 7 C4' U A 951 7.225 -34.015 22.957 1.00 53.04 C
ATOM 8 O4' U A 951 8.272 -34.990 22.845 1.00 53.04 O
ATOM 9 C3' U A 951 6.351 -34.332 21.780 1.00 53.61 C
ATOM 10 O3' U A 951 5.498 -33.287 21.464 1.00 53.71 O
ATOM 11 C2' U A 951 7.371 -34.636 20.696 1.00 53.81 C
ATOM 12 O2' U A 951 7.986 -33.447 20.226 1.00 53.66 O
ATOM 13 C1' U A 951 8.395 -35.397 21.499 1.00 53.50 C
ATOM 14 N1 U A 951 8.164 -36.809 21.450 1.00 53.80 N
ATOM 15 C2 U A 951 8.585 -37.443 20.325 1.00 54.20 C
ATOM 16 O2 U A 951 9.081 -36.832 19.391 1.00 54.30 O
ATOM 17 N3 U A 951 8.395 -38.790 20.378 1.00 54.47 N
ATOM 18 C4 U A 951 7.846 -39.468 21.448 1.00 54.36 C
ATOM 19 O4 U A 951 7.691 -40.678 21.412 1.00 54.64 O
ATOM 20 C5 U A 951 7.473 -38.696 22.570 1.00 53.93 C
ATOM 21 C6 U A 951 7.650 -37.399 22.558 1.00 53.66 C
ATOM 22 P U A 952 4.021 -33.580 20.954 1.00 51.05 P
ATOM 23 OP1 U A 952 3.138 -32.614 21.681 1.00 50.85 O
ATOM 24 OP2 U A 952 3.766 -35.026 21.076 1.00 51.29 O
ATOM 25 O5' U A 952 4.127 -33.196 19.428 1.00 51.46 O
TER
ATOM 1 O3' U B 986 11.255 -36.887 8.834 1.00 52.52 O
ATOM 2 P C B 987 12.688 -36.723 9.550 1.00 52.45 P
ATOM 3 OP1 C B 987 13.685 -36.350 8.492 1.00 52.62 O
ATOM 4 OP2 C B 987 12.927 -37.967 10.336 1.00 52.34 O
ATOM 5 O5' C B 987 12.426 -35.505 10.545 1.00 51.89 O
ATOM 6 C5' C B 987 12.117 -34.221 10.069 1.00 51.90 C
ATOM 7 C4' C B 987 11.585 -33.360 11.172 1.00 51.44 C
ATOM 8 O4' C B 987 10.377 -33.957 11.707 1.00 51.55 O
ATOM 9 C3' C B 987 12.427 -33.254 12.405 1.00 50.82 C
ATOM 10 O3' C B 987 13.622 -32.494 12.257 1.00 50.55 O
ATOM 11 C2' C B 987 11.413 -32.710 13.413 1.00 50.54 C
ATOM 12 O2' C B 987 11.090 -31.365 13.147 1.00 50.49 O
ATOM 13 C1' C B 987 10.198 -33.541 13.053 1.00 51.02 C
ATOM 14 N1 C B 987 10.069 -34.723 13.926 1.00 50.92 N
ATOM 15 C2 C B 987 9.576 -34.541 15.237 1.00 50.51 C
ATOM 16 O2 C B 987 9.227 -33.406 15.641 1.00 50.25 O
ATOM 17 N3 C B 987 9.503 -35.615 16.063 1.00 50.42 N
ATOM 18 C4 C B 987 9.886 -36.813 15.612 1.00 50.72 C
ATOM 19 N4 C B 987 9.818 -37.842 16.443 1.00 50.64 N
ATOM 20 C5 C B 987 10.373 -37.038 14.292 1.00 51.14 C
ATOM 21 C6 C B 987 10.464 -35.964 13.497 1.00 51.22 C
ATOM 22 P U B 988 15.023 -33.077 12.869 1.00 52.77 P
ATOM 23 OP1 U B 988 16.138 -32.234 12.337 1.00 52.65 O
ATOM 24 OP2 U B 988 15.052 -34.529 12.595 1.00 53.10 O
ATOM 25 O5' U B 988 14.846 -32.817 14.427 1.00 52.20 O
TER
ATOM 2 P U A 951 5.810 -35.927 25.994 1.00 52.72 P
ATOM 3 OP1 U A 951 4.877 -35.047 26.721 1.00 52.54 O
ATOM 4 OP2 U A 951 5.524 -37.374 25.945 1.00 53.04 O
ATOM 5 O5' U A 951 6.042 -35.391 24.521 1.00 53.01 O
ATOM 6 C5' U A 951 6.573 -34.110 24.305 1.00 52.77 C
ATOM 7 C4' U A 951 7.225 -34.015 22.957 1.00 53.04 C
ATOM 8 O4' U A 951 8.272 -34.990 22.845 1.00 53.04 O
ATOM 9 C3' U A 951 6.351 -34.332 21.780 1.00 53.61 C
ATOM 10 O3' U A 951 5.498 -33.287 21.464 1.00 53.71 O
ATOM 11 C2' U A 951 7.371 -34.636 20.696 1.00 53.81 C
ATOM 12 O2' U A 951 7.986 -33.447 20.226 1.00 53.66 O
ATOM 13 C1' U A 951 8.395 -35.397 21.499 1.00 53.50 C
ATOM 14 N1 U A 951 8.164 -36.809 21.450 1.00 53.80 N
ATOM 15 C2 U A 951 8.585 -37.443 20.325 1.00 54.20 C
ATOM 16 O2 U A 951 9.081 -36.832 19.391 1.00 54.30 O
ATOM 17 N3 U A 951 8.395 -38.790 20.378 1.00 54.47 N
ATOM 18 C4 U A 951 7.846 -39.468 21.448 1.00 54.36 C
ATOM 19 O4 U A 951 7.691 -40.678 21.412 1.00 54.64 O
ATOM 20 C5 U A 951 7.473 -38.696 22.570 1.00 53.93 C
ATOM 21 C6 U A 951 7.650 -37.399 22.558 1.00 53.66 C
ATOM 22 P U A 952 4.021 -33.580 20.954 1.00 51.05 P
ATOM 23 OP1 U A 952 3.138 -32.614 21.681 1.00 50.85 O
ATOM 24 OP2 U A 952 3.766 -35.026 21.076 1.00 51.29 O
ATOM 25 O5' U A 952 4.127 -33.196 19.428 1.00 51.46 O
TER
ATOM 1 O3' U B 986 11.255 -36.887 8.834 1.00 52.52 O
ATOM 2 P C B 987 12.688 -36.723 9.550 1.00 52.45 P
ATOM 3 OP1 C B 987 13.685 -36.350 8.492 1.00 52.62 O
ATOM 4 OP2 C B 987 12.927 -37.967 10.336 1.00 52.34 O
ATOM 5 O5' C B 987 12.426 -35.505 10.545 1.00 51.89 O
ATOM 6 C5' C B 987 12.117 -34.221 10.069 1.00 51.90 C
ATOM 7 C4' C B 987 11.585 -33.360 11.172 1.00 51.44 C
ATOM 8 O4' C B 987 10.377 -33.957 11.707 1.00 51.55 O
ATOM 9 C3' C B 987 12.427 -33.254 12.405 1.00 50.82 C
ATOM 10 O3' C B 987 13.622 -32.494 12.257 1.00 50.55 O
ATOM 11 C2' C B 987 11.413 -32.710 13.413 1.00 50.54 C
ATOM 12 O2' C B 987 11.090 -31.365 13.147 1.00 50.49 O
ATOM 13 C1' C B 987 10.198 -33.541 13.053 1.00 51.02 C
ATOM 14 N1 C B 987 10.069 -34.723 13.926 1.00 50.92 N
ATOM 15 C2 C B 987 9.576 -34.541 15.237 1.00 50.51 C
ATOM 16 O2 C B 987 9.227 -33.406 15.641 1.00 50.25 O
ATOM 17 N3 C B 987 9.503 -35.615 16.063 1.00 50.42 N
ATOM 18 C4 C B 987 9.886 -36.813 15.612 1.00 50.72 C
ATOM 19 N4 C B 987 9.818 -37.842 16.443 1.00 50.64 N
ATOM 20 C5 C B 987 10.373 -37.038 14.292 1.00 51.14 C
ATOM 21 C6 C B 987 10.464 -35.964 13.497 1.00 51.22 C
ATOM 22 P U B 988 15.023 -33.077 12.869 1.00 52.77 P
ATOM 23 OP1 U B 988 16.138 -32.234 12.337 1.00 52.65 O
ATOM 24 OP2 U B 988 15.052 -34.529 12.595 1.00 53.10 O
ATOM 25 O5' U B 988 14.846 -32.817 14.427 1.00 52.20 O
TER
Atoms:
C4: (7.846,-39.468,21.448)
N3: (8.395,-38.790,20.378)
OP1: (4.877,-35.047,26.721)
OP2: (5.524,-37.374,25.945)
C2: (8.585,-37.443,20.325)
C1': (8.395,-35.397,21.499)
C3': (6.351,-34.332,21.780)
O5': (6.042,-35.391,24.521)
O4': (8.272,-34.990,22.845)
C5': (6.573,-34.110,24.305)
P: (5.810,-35.927,25.994)
C4': (7.225,-34.015,22.957)
C2': (7.371,-34.636,20.696)
O2': (7.986,-33.447,20.226)
N1: (8.164,-36.809,21.450)
O4: (7.691,-40.678,21.412)
O2: (9.081,-36.832,19.391)
C6: (7.650,-37.399,22.558)
C5: (7.473,-38.696,22.570)
O3': (5.498,-33.287,21.464)
N3: (8.395,-38.790,20.378)
OP1: (4.877,-35.047,26.721)
OP2: (5.524,-37.374,25.945)
C2: (8.585,-37.443,20.325)
C1': (8.395,-35.397,21.499)
C3': (6.351,-34.332,21.780)
O5': (6.042,-35.391,24.521)
O4': (8.272,-34.990,22.845)
C5': (6.573,-34.110,24.305)
P: (5.810,-35.927,25.994)
C4': (7.225,-34.015,22.957)
C2': (7.371,-34.636,20.696)
O2': (7.986,-33.447,20.226)
N1: (8.164,-36.809,21.450)
O4: (7.691,-40.678,21.412)
O2: (9.081,-36.832,19.391)
C6: (7.650,-37.399,22.558)
C5: (7.473,-38.696,22.570)
O3': (5.498,-33.287,21.464)
C2: (9.576,-34.541,15.237)
OP1: (13.685,-36.350,8.492)
OP2: (12.927,-37.967,10.336)
C4: (9.886,-36.813,15.612)
O5': (12.426,-35.505,10.545)
C3': (12.427,-33.254,12.405)
C1': (10.198,-33.541,13.053)
O4': (10.377,-33.957,11.707)
C5': (12.117,-34.221,10.069)
P: (12.688,-36.723,9.550)
O2: (9.227,-33.406,15.641)
C4': (11.585,-33.360,11.172)
C2': (11.413,-32.710,13.413)
O2': (11.090,-31.365,13.147)
N1: (10.069,-34.723,13.926)
N3: (9.503,-35.615,16.063)
N4: (9.818,-37.842,16.443)
C6: (10.464,-35.964,13.497)
C5: (10.373,-37.038,14.292)
O3': (13.622,-32.494,12.257)
OP1: (13.685,-36.350,8.492)
OP2: (12.927,-37.967,10.336)
C4: (9.886,-36.813,15.612)
O5': (12.426,-35.505,10.545)
C3': (12.427,-33.254,12.405)
C1': (10.198,-33.541,13.053)
O4': (10.377,-33.957,11.707)
C5': (12.117,-34.221,10.069)
P: (12.688,-36.723,9.550)
O2: (9.227,-33.406,15.641)
C4': (11.585,-33.360,11.172)
C2': (11.413,-32.710,13.413)
O2': (11.090,-31.365,13.147)
N1: (10.069,-34.723,13.926)
N3: (9.503,-35.615,16.063)
N4: (9.818,-37.842,16.443)
C6: (10.464,-35.964,13.497)
C5: (10.373,-37.038,14.292)
O3': (13.622,-32.494,12.257)
Image (generated by PyMOL):