Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
422D:A7:B8
Extra
PDB:
ATOM 1 O3' U A 6 1.000 -0.653 8.234 1.00 3.62 O
ATOM 2 P U A 7 1.400 -1.616 9.440 1.00 6.45 P
ATOM 3 OP1 U A 7 0.349 -1.508 10.479 1.00 9.86 O
ATOM 4 OP2 U A 7 2.797 -1.367 9.809 1.00 5.36 O
ATOM 5 O5' U A 7 1.331 -3.070 8.795 1.00 7.28 O
ATOM 6 C5' U A 7 0.073 -3.676 8.479 1.00 8.87 C
ATOM 7 C4' U A 7 0.251 -5.157 8.265 1.00 9.05 C
ATOM 8 O4' U A 7 1.077 -5.348 7.096 1.00 9.03 O
ATOM 9 C3' U A 7 1.012 -5.912 9.340 1.00 13.85 C
ATOM 10 O3' U A 7 0.179 -6.214 10.449 1.00 19.04 O
ATOM 11 C2' U A 7 1.469 -7.148 8.576 1.00 12.83 C
ATOM 12 O2' U A 7 0.457 -8.121 8.357 1.00 15.88 O
ATOM 13 C1' U A 7 1.846 -6.520 7.241 1.00 9.13 C
ATOM 14 N1 U A 7 3.265 -6.159 7.151 1.00 6.21 N
ATOM 15 C2 U A 7 4.128 -7.167 6.827 1.00 7.12 C
ATOM 16 O2 U A 7 3.759 -8.321 6.625 1.00 10.82 O
ATOM 17 N3 U A 7 5.437 -6.792 6.744 1.00 4.92 N
ATOM 18 C4 U A 7 5.953 -5.548 6.950 1.00 3.72 C
ATOM 19 O4 U A 7 7.164 -5.369 6.816 1.00 4.84 O
ATOM 20 C5 U A 7 4.991 -4.555 7.291 1.00 2.00 C
ATOM 21 C6 U A 7 3.710 -4.889 7.376 1.00 2.20 C
ATOM 22 P C A 8 0.784 -6.193 11.933 1.00 19.35 P
ATOM 23 OP1 C A 8 -0.385 -6.148 12.845 1.00 23.98 O
ATOM 24 OP2 C A 8 1.868 -5.169 12.068 1.00 20.88 O
ATOM 25 O5' C A 8 1.503 -7.599 12.065 1.00 18.62 O
TER
ATOM 1 O3' U B 7 17.331 -7.588 5.988 1.00 6.38 O
ATOM 2 P C B 8 16.720 -7.261 4.550 1.00 5.83 P
ATOM 3 OP1 C B 8 17.792 -7.440 3.546 1.00 14.00 O
ATOM 4 OP2 C B 8 15.962 -5.985 4.587 1.00 9.99 O
ATOM 5 O5' C B 8 15.637 -8.404 4.373 1.00 11.48 O
ATOM 6 C5' C B 8 16.024 -9.786 4.375 1.00 10.92 C
ATOM 7 C4' C B 8 14.815 -10.646 4.167 1.00 9.01 C
ATOM 8 O4' C B 8 13.983 -10.556 5.349 1.00 6.98 O
ATOM 9 C3' C B 8 13.898 -10.135 3.080 1.00 10.72 C
ATOM 10 O3' C B 8 14.334 -10.429 1.763 1.00 12.10 O
ATOM 11 C2' C B 8 12.579 -10.781 3.459 1.00 12.52 C
ATOM 12 O2' C B 8 12.518 -12.152 3.126 1.00 18.22 O
ATOM 13 C1' C B 8 12.614 -10.611 4.975 1.00 10.06 C
ATOM 14 N1 C B 8 11.941 -9.372 5.403 1.00 10.07 N
ATOM 15 C2 C B 8 10.571 -9.420 5.643 1.00 11.23 C
ATOM 16 O2 C B 8 9.983 -10.493 5.494 1.00 12.28 O
ATOM 17 N3 C B 8 9.919 -8.299 6.022 1.00 8.82 N
ATOM 18 C4 C B 8 10.588 -7.161 6.162 1.00 9.73 C
ATOM 19 N4 C B 8 9.912 -6.092 6.547 1.00 9.80 N
ATOM 20 C5 C B 8 11.986 -7.072 5.919 1.00 10.50 C
ATOM 21 C6 C B 8 12.622 -8.198 5.549 1.00 11.22 C
ATOM 22 P G B 9 13.751 -9.561 0.549 1.00 12.49 P
ATOM 23 OP1 G B 9 14.181 -10.145 -0.734 1.00 14.08 O
ATOM 24 OP2 G B 9 13.980 -8.114 0.806 1.00 12.00 O
ATOM 25 O5' G B 9 12.206 -9.832 0.735 1.00 10.48 O
TER
ATOM 2 P U A 7 1.400 -1.616 9.440 1.00 6.45 P
ATOM 3 OP1 U A 7 0.349 -1.508 10.479 1.00 9.86 O
ATOM 4 OP2 U A 7 2.797 -1.367 9.809 1.00 5.36 O
ATOM 5 O5' U A 7 1.331 -3.070 8.795 1.00 7.28 O
ATOM 6 C5' U A 7 0.073 -3.676 8.479 1.00 8.87 C
ATOM 7 C4' U A 7 0.251 -5.157 8.265 1.00 9.05 C
ATOM 8 O4' U A 7 1.077 -5.348 7.096 1.00 9.03 O
ATOM 9 C3' U A 7 1.012 -5.912 9.340 1.00 13.85 C
ATOM 10 O3' U A 7 0.179 -6.214 10.449 1.00 19.04 O
ATOM 11 C2' U A 7 1.469 -7.148 8.576 1.00 12.83 C
ATOM 12 O2' U A 7 0.457 -8.121 8.357 1.00 15.88 O
ATOM 13 C1' U A 7 1.846 -6.520 7.241 1.00 9.13 C
ATOM 14 N1 U A 7 3.265 -6.159 7.151 1.00 6.21 N
ATOM 15 C2 U A 7 4.128 -7.167 6.827 1.00 7.12 C
ATOM 16 O2 U A 7 3.759 -8.321 6.625 1.00 10.82 O
ATOM 17 N3 U A 7 5.437 -6.792 6.744 1.00 4.92 N
ATOM 18 C4 U A 7 5.953 -5.548 6.950 1.00 3.72 C
ATOM 19 O4 U A 7 7.164 -5.369 6.816 1.00 4.84 O
ATOM 20 C5 U A 7 4.991 -4.555 7.291 1.00 2.00 C
ATOM 21 C6 U A 7 3.710 -4.889 7.376 1.00 2.20 C
ATOM 22 P C A 8 0.784 -6.193 11.933 1.00 19.35 P
ATOM 23 OP1 C A 8 -0.385 -6.148 12.845 1.00 23.98 O
ATOM 24 OP2 C A 8 1.868 -5.169 12.068 1.00 20.88 O
ATOM 25 O5' C A 8 1.503 -7.599 12.065 1.00 18.62 O
TER
ATOM 1 O3' U B 7 17.331 -7.588 5.988 1.00 6.38 O
ATOM 2 P C B 8 16.720 -7.261 4.550 1.00 5.83 P
ATOM 3 OP1 C B 8 17.792 -7.440 3.546 1.00 14.00 O
ATOM 4 OP2 C B 8 15.962 -5.985 4.587 1.00 9.99 O
ATOM 5 O5' C B 8 15.637 -8.404 4.373 1.00 11.48 O
ATOM 6 C5' C B 8 16.024 -9.786 4.375 1.00 10.92 C
ATOM 7 C4' C B 8 14.815 -10.646 4.167 1.00 9.01 C
ATOM 8 O4' C B 8 13.983 -10.556 5.349 1.00 6.98 O
ATOM 9 C3' C B 8 13.898 -10.135 3.080 1.00 10.72 C
ATOM 10 O3' C B 8 14.334 -10.429 1.763 1.00 12.10 O
ATOM 11 C2' C B 8 12.579 -10.781 3.459 1.00 12.52 C
ATOM 12 O2' C B 8 12.518 -12.152 3.126 1.00 18.22 O
ATOM 13 C1' C B 8 12.614 -10.611 4.975 1.00 10.06 C
ATOM 14 N1 C B 8 11.941 -9.372 5.403 1.00 10.07 N
ATOM 15 C2 C B 8 10.571 -9.420 5.643 1.00 11.23 C
ATOM 16 O2 C B 8 9.983 -10.493 5.494 1.00 12.28 O
ATOM 17 N3 C B 8 9.919 -8.299 6.022 1.00 8.82 N
ATOM 18 C4 C B 8 10.588 -7.161 6.162 1.00 9.73 C
ATOM 19 N4 C B 8 9.912 -6.092 6.547 1.00 9.80 N
ATOM 20 C5 C B 8 11.986 -7.072 5.919 1.00 10.50 C
ATOM 21 C6 C B 8 12.622 -8.198 5.549 1.00 11.22 C
ATOM 22 P G B 9 13.751 -9.561 0.549 1.00 12.49 P
ATOM 23 OP1 G B 9 14.181 -10.145 -0.734 1.00 14.08 O
ATOM 24 OP2 G B 9 13.980 -8.114 0.806 1.00 12.00 O
ATOM 25 O5' G B 9 12.206 -9.832 0.735 1.00 10.48 O
TER
Atoms:
C4: (5.953,-5.548,6.950)
N3: (5.437,-6.792,6.744)
OP1: (0.349,-1.508,10.479)
OP2: (2.797,-1.367,9.809)
C2: (4.128,-7.167,6.827)
C1': (1.846,-6.520,7.241)
C3': (1.012,-5.912,9.340)
O5': (1.331,-3.070,8.795)
O4': (1.077,-5.348,7.096)
C5': (0.073,-3.676,8.479)
P: (1.400,-1.616,9.440)
C4': (0.251,-5.157,8.265)
C2': (1.469,-7.148,8.576)
O2': (0.457,-8.121,8.357)
N1: (3.265,-6.159,7.151)
O4: (7.164,-5.369,6.816)
O2: (3.759,-8.321,6.625)
C6: (3.710,-4.889,7.376)
C5: (4.991,-4.555,7.291)
O3': (0.179,-6.214,10.449)
N3: (5.437,-6.792,6.744)
OP1: (0.349,-1.508,10.479)
OP2: (2.797,-1.367,9.809)
C2: (4.128,-7.167,6.827)
C1': (1.846,-6.520,7.241)
C3': (1.012,-5.912,9.340)
O5': (1.331,-3.070,8.795)
O4': (1.077,-5.348,7.096)
C5': (0.073,-3.676,8.479)
P: (1.400,-1.616,9.440)
C4': (0.251,-5.157,8.265)
C2': (1.469,-7.148,8.576)
O2': (0.457,-8.121,8.357)
N1: (3.265,-6.159,7.151)
O4: (7.164,-5.369,6.816)
O2: (3.759,-8.321,6.625)
C6: (3.710,-4.889,7.376)
C5: (4.991,-4.555,7.291)
O3': (0.179,-6.214,10.449)
C2: (10.571,-9.420,5.643)
OP1: (17.792,-7.440,3.546)
OP2: (15.962,-5.985,4.587)
C4: (10.588,-7.161,6.162)
O5': (15.637,-8.404,4.373)
C3': (13.898,-10.135,3.080)
C1': (12.614,-10.611,4.975)
O4': (13.983,-10.556,5.349)
C5': (16.024,-9.786,4.375)
P: (16.720,-7.261,4.550)
O2: (9.983,-10.493,5.494)
C4': (14.815,-10.646,4.167)
C2': (12.579,-10.781,3.459)
O2': (12.518,-12.152,3.126)
N1: (11.941,-9.372,5.403)
N3: (9.919,-8.299,6.022)
N4: (9.912,-6.092,6.547)
C6: (12.622,-8.198,5.549)
C5: (11.986,-7.072,5.919)
O3': (14.334,-10.429,1.763)
OP1: (17.792,-7.440,3.546)
OP2: (15.962,-5.985,4.587)
C4: (10.588,-7.161,6.162)
O5': (15.637,-8.404,4.373)
C3': (13.898,-10.135,3.080)
C1': (12.614,-10.611,4.975)
O4': (13.983,-10.556,5.349)
C5': (16.024,-9.786,4.375)
P: (16.720,-7.261,4.550)
O2: (9.983,-10.493,5.494)
C4': (14.815,-10.646,4.167)
C2': (12.579,-10.781,3.459)
O2': (12.518,-12.152,3.126)
N1: (11.941,-9.372,5.403)
N3: (9.919,-8.299,6.022)
N4: (9.912,-6.092,6.547)
C6: (12.622,-8.198,5.549)
C5: (11.986,-7.072,5.919)
O3': (14.334,-10.429,1.763)
Image (generated by PyMOL):