Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21464:21506
Extra
PDB:
ATOM 1 O3' C A1463 -88.005 -84.596 58.832 1.00 90.52 O
ATOM 2 P C A1464 -89.349 -83.942 59.396 1.00 95.48 P
ATOM 3 OP1 C A1464 -90.064 -84.978 60.172 1.00 96.41 O
ATOM 4 OP2 C A1464 -90.036 -83.336 58.222 1.00 95.27 O
ATOM 5 O5' C A1464 -88.842 -82.798 60.364 1.00 94.99 O
ATOM 6 C5' C A1464 -89.752 -82.175 61.251 1.00 95.33 C
ATOM 7 C4' C A1464 -89.284 -80.815 61.700 1.00 94.67 C
ATOM 8 O4' C A1464 -87.882 -80.839 62.065 1.00 94.16 O
ATOM 9 C3' C A1464 -89.359 -79.680 60.695 1.00 94.01 C
ATOM 10 O3' C A1464 -90.688 -79.220 60.470 1.00 94.37 O
ATOM 11 C2' C A1464 -88.484 -78.652 61.383 1.00 93.37 C
ATOM 12 O2' C A1464 -89.186 -78.069 62.464 1.00 93.69 O
ATOM 13 C1' C A1464 -87.379 -79.529 61.967 1.00 93.38 C
ATOM 14 N1 C A1464 -86.186 -79.526 61.125 1.00 92.70 N
ATOM 15 C2 C A1464 -85.196 -78.601 61.440 1.00 91.99 C
ATOM 16 O2 C A1464 -85.359 -77.847 62.424 1.00 91.97 O
ATOM 17 N3 C A1464 -84.090 -78.598 60.661 1.00 91.39 N
ATOM 18 C4 C A1464 -83.968 -79.433 59.616 1.00 91.46 C
ATOM 19 N4 C A1464 -82.868 -79.401 58.855 1.00 90.87 N
ATOM 20 C5 C A1464 -84.988 -80.364 59.287 1.00 92.16 C
ATOM 21 C6 C A1464 -86.076 -80.367 60.059 1.00 92.76 C
ATOM 22 P A A1465 -90.987 -78.029 59.422 1.00 88.08 P
ATOM 23 OP1 A A1465 -92.432 -77.742 59.496 1.00 88.67 O
ATOM 24 OP2 A A1465 -90.398 -78.425 58.120 1.00 87.71 O
ATOM 25 O5' A A1465 -90.177 -76.802 60.016 1.00 87.37 O
TER
ATOM 1 O3' G B1505 -84.492 -80.547 55.442 1.00 90.42 O
ATOM 2 P A B1506 -82.895 -80.295 55.270 1.00 82.49 P
ATOM 3 OP1 A B1506 -82.475 -80.927 54.008 1.00 82.38 O
ATOM 4 OP2 A B1506 -82.281 -80.748 56.525 1.00 82.67 O
ATOM 5 O5' A B1506 -82.744 -78.705 55.150 1.00 81.80 O
ATOM 6 C5' A B1506 -81.892 -78.131 54.157 1.00 81.11 C
ATOM 7 C4' A B1506 -81.075 -76.994 54.699 1.00 80.46 C
ATOM 8 O4' A B1506 -81.946 -75.929 55.133 1.00 80.45 O
ATOM 9 C3' A B1506 -80.233 -77.310 55.923 1.00 80.48 C
ATOM 10 O3' A B1506 -79.000 -77.930 55.604 1.00 80.24 O
ATOM 11 C2' A B1506 -80.079 -75.957 56.627 1.00 80.03 C
ATOM 12 O2' A B1506 -78.976 -75.214 56.128 1.00 79.28 O
ATOM 13 C1' A B1506 -81.368 -75.245 56.235 1.00 80.16 C
ATOM 14 N9 A B1506 -82.326 -75.206 57.362 1.00 80.69 N
ATOM 15 C8 A B1506 -83.426 -75.966 57.681 1.00 81.45 C
ATOM 16 N7 A B1506 -83.989 -75.590 58.811 1.00 81.73 N
ATOM 17 C5 A B1506 -83.199 -74.537 59.279 1.00 81.11 C
ATOM 18 C6 A B1506 -83.253 -73.693 60.415 1.00 81.03 C
ATOM 19 N6 A B1506 -84.148 -73.726 61.408 1.00 81.59 N
ATOM 20 N1 A B1506 -82.316 -72.767 60.527 1.00 80.35 N
ATOM 21 C2 A B1506 -81.400 -72.705 59.565 1.00 79.80 C
ATOM 22 N3 A B1506 -81.227 -73.412 58.466 1.00 79.80 N
ATOM 23 C4 A B1506 -82.181 -74.315 58.386 1.00 80.48 C
ATOM 24 P A B1507 -78.608 -79.295 56.325 1.00 94.12 P
ATOM 25 OP1 A B1507 -77.847 -80.113 55.355 1.00 94.03 O
ATOM 26 OP2 A B1507 -79.847 -79.815 56.874 1.00 94.84 O
ATOM 27 O5' A B1507 -77.664 -78.828 57.513 1.00 93.84 O
TER
ATOM 2 P C A1464 -89.349 -83.942 59.396 1.00 95.48 P
ATOM 3 OP1 C A1464 -90.064 -84.978 60.172 1.00 96.41 O
ATOM 4 OP2 C A1464 -90.036 -83.336 58.222 1.00 95.27 O
ATOM 5 O5' C A1464 -88.842 -82.798 60.364 1.00 94.99 O
ATOM 6 C5' C A1464 -89.752 -82.175 61.251 1.00 95.33 C
ATOM 7 C4' C A1464 -89.284 -80.815 61.700 1.00 94.67 C
ATOM 8 O4' C A1464 -87.882 -80.839 62.065 1.00 94.16 O
ATOM 9 C3' C A1464 -89.359 -79.680 60.695 1.00 94.01 C
ATOM 10 O3' C A1464 -90.688 -79.220 60.470 1.00 94.37 O
ATOM 11 C2' C A1464 -88.484 -78.652 61.383 1.00 93.37 C
ATOM 12 O2' C A1464 -89.186 -78.069 62.464 1.00 93.69 O
ATOM 13 C1' C A1464 -87.379 -79.529 61.967 1.00 93.38 C
ATOM 14 N1 C A1464 -86.186 -79.526 61.125 1.00 92.70 N
ATOM 15 C2 C A1464 -85.196 -78.601 61.440 1.00 91.99 C
ATOM 16 O2 C A1464 -85.359 -77.847 62.424 1.00 91.97 O
ATOM 17 N3 C A1464 -84.090 -78.598 60.661 1.00 91.39 N
ATOM 18 C4 C A1464 -83.968 -79.433 59.616 1.00 91.46 C
ATOM 19 N4 C A1464 -82.868 -79.401 58.855 1.00 90.87 N
ATOM 20 C5 C A1464 -84.988 -80.364 59.287 1.00 92.16 C
ATOM 21 C6 C A1464 -86.076 -80.367 60.059 1.00 92.76 C
ATOM 22 P A A1465 -90.987 -78.029 59.422 1.00 88.08 P
ATOM 23 OP1 A A1465 -92.432 -77.742 59.496 1.00 88.67 O
ATOM 24 OP2 A A1465 -90.398 -78.425 58.120 1.00 87.71 O
ATOM 25 O5' A A1465 -90.177 -76.802 60.016 1.00 87.37 O
TER
ATOM 1 O3' G B1505 -84.492 -80.547 55.442 1.00 90.42 O
ATOM 2 P A B1506 -82.895 -80.295 55.270 1.00 82.49 P
ATOM 3 OP1 A B1506 -82.475 -80.927 54.008 1.00 82.38 O
ATOM 4 OP2 A B1506 -82.281 -80.748 56.525 1.00 82.67 O
ATOM 5 O5' A B1506 -82.744 -78.705 55.150 1.00 81.80 O
ATOM 6 C5' A B1506 -81.892 -78.131 54.157 1.00 81.11 C
ATOM 7 C4' A B1506 -81.075 -76.994 54.699 1.00 80.46 C
ATOM 8 O4' A B1506 -81.946 -75.929 55.133 1.00 80.45 O
ATOM 9 C3' A B1506 -80.233 -77.310 55.923 1.00 80.48 C
ATOM 10 O3' A B1506 -79.000 -77.930 55.604 1.00 80.24 O
ATOM 11 C2' A B1506 -80.079 -75.957 56.627 1.00 80.03 C
ATOM 12 O2' A B1506 -78.976 -75.214 56.128 1.00 79.28 O
ATOM 13 C1' A B1506 -81.368 -75.245 56.235 1.00 80.16 C
ATOM 14 N9 A B1506 -82.326 -75.206 57.362 1.00 80.69 N
ATOM 15 C8 A B1506 -83.426 -75.966 57.681 1.00 81.45 C
ATOM 16 N7 A B1506 -83.989 -75.590 58.811 1.00 81.73 N
ATOM 17 C5 A B1506 -83.199 -74.537 59.279 1.00 81.11 C
ATOM 18 C6 A B1506 -83.253 -73.693 60.415 1.00 81.03 C
ATOM 19 N6 A B1506 -84.148 -73.726 61.408 1.00 81.59 N
ATOM 20 N1 A B1506 -82.316 -72.767 60.527 1.00 80.35 N
ATOM 21 C2 A B1506 -81.400 -72.705 59.565 1.00 79.80 C
ATOM 22 N3 A B1506 -81.227 -73.412 58.466 1.00 79.80 N
ATOM 23 C4 A B1506 -82.181 -74.315 58.386 1.00 80.48 C
ATOM 24 P A B1507 -78.608 -79.295 56.325 1.00 94.12 P
ATOM 25 OP1 A B1507 -77.847 -80.113 55.355 1.00 94.03 O
ATOM 26 OP2 A B1507 -79.847 -79.815 56.874 1.00 94.84 O
ATOM 27 O5' A B1507 -77.664 -78.828 57.513 1.00 93.84 O
TER
Atoms:
C2: (-85.196,-78.601,61.440)
OP1: (-90.064,-84.978,60.172)
OP2: (-90.036,-83.336,58.222)
C4: (-83.968,-79.433,59.616)
O5': (-88.842,-82.798,60.364)
C3': (-89.359,-79.680,60.695)
C1': (-87.379,-79.529,61.967)
O4': (-87.882,-80.839,62.065)
C5': (-89.752,-82.175,61.251)
P: (-89.349,-83.942,59.396)
O2: (-85.359,-77.847,62.424)
C4': (-89.284,-80.815,61.700)
C2': (-88.484,-78.652,61.383)
O2': (-89.186,-78.069,62.464)
N1: (-86.186,-79.526,61.125)
N3: (-84.090,-78.598,60.661)
N4: (-82.868,-79.401,58.855)
C6: (-86.076,-80.367,60.059)
C5: (-84.988,-80.364,59.287)
O3': (-90.688,-79.220,60.470)
OP1: (-90.064,-84.978,60.172)
OP2: (-90.036,-83.336,58.222)
C4: (-83.968,-79.433,59.616)
O5': (-88.842,-82.798,60.364)
C3': (-89.359,-79.680,60.695)
C1': (-87.379,-79.529,61.967)
O4': (-87.882,-80.839,62.065)
C5': (-89.752,-82.175,61.251)
P: (-89.349,-83.942,59.396)
O2: (-85.359,-77.847,62.424)
C4': (-89.284,-80.815,61.700)
C2': (-88.484,-78.652,61.383)
O2': (-89.186,-78.069,62.464)
N1: (-86.186,-79.526,61.125)
N3: (-84.090,-78.598,60.661)
N4: (-82.868,-79.401,58.855)
C6: (-86.076,-80.367,60.059)
C5: (-84.988,-80.364,59.287)
O3': (-90.688,-79.220,60.470)
OP1: (-82.475,-80.927,54.008)
OP2: (-82.281,-80.748,56.525)
C3': (-80.233,-77.310,55.923)
C1': (-81.368,-75.245,56.235)
C5': (-81.892,-78.131,54.157)
O4': (-81.946,-75.929,55.133)
C8: (-83.426,-75.966,57.681)
O2': (-78.976,-75.214,56.128)
C6: (-83.253,-73.693,60.415)
C5: (-83.199,-74.537,59.279)
C4: (-82.181,-74.315,58.386)
P: (-82.895,-80.295,55.270)
C4': (-81.075,-76.994,54.699)
C2': (-80.079,-75.957,56.627)
C2: (-81.400,-72.705,59.565)
N1: (-82.316,-72.767,60.527)
N3: (-81.227,-73.412,58.466)
N6: (-84.148,-73.726,61.408)
N7: (-83.989,-75.590,58.811)
N9: (-82.326,-75.206,57.362)
O5': (-82.744,-78.705,55.150)
O3': (-79.000,-77.930,55.604)
OP2: (-82.281,-80.748,56.525)
C3': (-80.233,-77.310,55.923)
C1': (-81.368,-75.245,56.235)
C5': (-81.892,-78.131,54.157)
O4': (-81.946,-75.929,55.133)
C8: (-83.426,-75.966,57.681)
O2': (-78.976,-75.214,56.128)
C6: (-83.253,-73.693,60.415)
C5: (-83.199,-74.537,59.279)
C4: (-82.181,-74.315,58.386)
P: (-82.895,-80.295,55.270)
C4': (-81.075,-76.994,54.699)
C2': (-80.079,-75.957,56.627)
C2: (-81.400,-72.705,59.565)
N1: (-82.316,-72.767,60.527)
N3: (-81.227,-73.412,58.466)
N6: (-84.148,-73.726,61.408)
N7: (-83.989,-75.590,58.811)
N9: (-82.326,-75.206,57.362)
O5': (-82.744,-78.705,55.150)
O3': (-79.000,-77.930,55.604)
Image (generated by PyMOL):