ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A1421:A1420

Extra

PDB:
ATOM 1 O3' A A1420 97.299 27.825 -21.842 1.00 70.15 O
ATOM 2 P C A1421 95.986 27.609 -22.765 1.00 62.09 P
ATOM 3 OP1 C A1421 94.958 28.659 -22.561 1.00 63.62 O
ATOM 4 OP2 C A1421 95.588 26.179 -22.682 1.00 63.62 O
ATOM 5 O5' C A1421 96.591 27.845 -24.216 1.00 62.09 O
ATOM 6 C5' C A1421 97.238 29.085 -24.526 1.00 62.09 C
ATOM 7 C4' C A1421 98.514 28.845 -25.285 1.00 62.09 C
ATOM 8 O4' C A1421 99.515 28.270 -24.413 1.00 62.09 O
ATOM 9 C3' C A1421 98.409 27.935 -26.501 1.00 62.09 C
ATOM 10 O3' C A1421 99.254 28.465 -27.523 1.00 62.09 O
ATOM 11 C2' C A1421 98.995 26.623 -25.985 1.00 62.09 C
ATOM 12 O2' C A1421 99.592 25.818 -26.980 1.00 62.09 O
ATOM 13 C1' C A1421 100.070 27.136 -25.034 1.00 62.09 C
ATOM 14 N1 C A1421 100.504 26.175 -24.009 1.00 63.62 N
ATOM 15 C2 C A1421 101.652 25.412 -24.251 1.00 63.62 C
ATOM 16 O2 C A1421 102.271 25.566 -25.316 1.00 63.62 O
ATOM 17 N3 C A1421 102.062 24.528 -23.318 1.00 63.62 N
ATOM 18 C4 C A1421 101.383 24.397 -22.180 1.00 63.62 C
ATOM 19 N4 C A1421 101.834 23.522 -21.289 1.00 63.62 N
ATOM 20 C5 C A1421 100.215 25.159 -21.907 1.00 63.62 C
ATOM 21 C6 C A1421 99.812 26.025 -22.840 1.00 63.62 C
ATOM 22 P G A1422 98.619 29.268 -28.770 1.00 64.50 P
ATOM 23 OP1 G A1422 97.135 29.273 -28.658 1.00 69.32 O
ATOM 24 OP2 G A1422 99.269 28.764 -30.014 1.00 69.32 O
ATOM 25 O5' G A1422 99.101 30.765 -28.541 1.00 64.50 O
TER

ATOM 1 O3' U B1419 100.211 25.610 -17.173 1.00 57.70 O
ATOM 2 P A B1420 99.132 24.712 -17.958 1.00 70.15 P
ATOM 3 OP1 A B1420 98.086 24.306 -16.991 1.00 84.19 O
ATOM 4 OP2 A B1420 99.827 23.681 -18.769 1.00 84.19 O
ATOM 5 O5' A B1420 98.458 25.741 -18.957 1.00 70.15 O
ATOM 6 C5' A B1420 97.251 25.415 -19.667 1.00 70.15 C
ATOM 7 C4' A B1420 96.426 26.661 -19.849 1.00 70.15 C
ATOM 8 O4' A B1420 95.994 27.101 -18.542 1.00 70.15 O
ATOM 9 C3' A B1420 97.209 27.835 -20.416 1.00 70.15 C
ATOM 10 O3' A B1420 97.299 27.825 -21.842 1.00 70.15 O
ATOM 11 C2' A B1420 96.562 29.059 -19.796 1.00 70.15 C
ATOM 12 O2' A B1420 95.491 29.599 -20.533 1.00 70.15 O
ATOM 13 C1' A B1420 96.081 28.508 -18.453 1.00 70.15 C
ATOM 14 N9 A B1420 96.967 28.841 -17.343 1.00 84.19 N
ATOM 15 C8 A B1420 98.188 28.298 -17.036 1.00 84.19 C
ATOM 16 N7 A B1420 98.759 28.844 -15.991 1.00 84.19 N
ATOM 17 C5 A B1420 97.847 29.804 -15.579 1.00 84.19 C
ATOM 18 C6 A B1420 97.869 30.739 -14.533 1.00 84.19 C
ATOM 19 N6 A B1420 98.888 30.866 -13.677 1.00 84.19 N
ATOM 20 N1 A B1420 96.800 31.554 -14.397 1.00 84.19 N
ATOM 21 C2 A B1420 95.785 31.430 -15.262 1.00 84.19 C
ATOM 22 N3 A B1420 95.651 30.594 -16.288 1.00 84.19 N
ATOM 23 C4 A B1420 96.732 29.802 -16.394 1.00 84.19 C
ATOM 24 P C B1421 95.986 27.609 -22.765 1.00 62.09 P
ATOM 25 OP1 C B1421 94.958 28.659 -22.561 1.00 63.62 O
ATOM 26 OP2 C B1421 95.588 26.179 -22.682 1.00 63.62 O
ATOM 27 O5' C B1421 96.591 27.845 -24.216 1.00 62.09 O
TER

Atoms:
C2: (101.652,25.412,-24.251)
OP1: (94.958,28.659,-22.561)
OP2: (95.588,26.179,-22.682)
C4: (101.383,24.397,-22.180)
O5': (96.591,27.845,-24.216)
C3': (98.409,27.935,-26.501)
C1': (100.070,27.136,-25.034)
O4': (99.515,28.270,-24.413)
C5': (97.238,29.085,-24.526)
P: (95.986,27.609,-22.765)
O2: (102.271,25.566,-25.316)
C4': (98.514,28.845,-25.285)
C2': (98.995,26.623,-25.985)
O2': (99.592,25.818,-26.980)
N1: (100.504,26.175,-24.009)
N3: (102.062,24.528,-23.318)
N4: (101.834,23.522,-21.289)
C6: (99.812,26.025,-22.840)
C5: (100.215,25.159,-21.907)
O3': (99.254,28.465,-27.523)
OP1: (98.086,24.306,-16.991)
OP2: (99.827,23.681,-18.769)
C3': (97.209,27.835,-20.416)
C1': (96.081,28.508,-18.453)
C5': (97.251,25.415,-19.667)
O4': (95.994,27.101,-18.542)
C8: (98.188,28.298,-17.036)
O2': (95.491,29.599,-20.533)
C6: (97.869,30.739,-14.533)
C5: (97.847,29.804,-15.579)
C4: (96.732,29.802,-16.394)
P: (99.132,24.712,-17.958)
C4': (96.426,26.661,-19.849)
C2': (96.562,29.059,-19.796)
C2: (95.785,31.430,-15.262)
N1: (96.800,31.554,-14.397)
N3: (95.651,30.594,-16.288)
N6: (98.888,30.866,-13.677)
N7: (98.759,28.844,-15.991)
N9: (96.967,28.841,-17.343)
O5': (98.458,25.741,-18.957)
O3': (97.299,27.825,-21.842)
Image (generated by PyMOL):
PyMOL image
show in jmol