Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1221:A1220
Extra
PDB:
ATOM 1 O3' A A1220 18.934 92.075 98.958 1.00 39.88 O
ATOM 2 P C A1221 17.851 91.604 97.895 1.00 40.26 P
ATOM 3 OP1 C A1221 18.456 90.455 97.193 1.00 39.64 O
ATOM 4 OP2 C A1221 17.464 92.809 97.131 1.00 43.93 O
ATOM 5 O5' C A1221 16.628 91.084 98.769 1.00 39.03 O
ATOM 6 C5' C A1221 16.701 89.811 99.444 1.00 39.34 C
ATOM 7 C4' C A1221 15.612 89.722 100.464 1.00 39.91 C
ATOM 8 O4' C A1221 15.818 90.743 101.468 1.00 38.41 O
ATOM 9 C3' C A1221 14.250 90.055 99.892 1.00 40.59 C
ATOM 10 O3' C A1221 13.700 88.928 99.231 1.00 42.27 O
ATOM 11 C2' C A1221 13.503 90.462 101.141 1.00 40.63 C
ATOM 12 O2' C A1221 13.238 89.335 101.956 1.00 39.54 O
ATOM 13 C1' C A1221 14.575 91.308 101.821 1.00 39.56 C
ATOM 14 N1 C A1221 14.532 92.715 101.360 1.00 40.29 N
ATOM 15 C2 C A1221 13.538 93.519 101.875 1.00 40.60 C
ATOM 16 O2 C A1221 12.728 93.018 102.652 1.00 42.26 O
ATOM 17 N3 C A1221 13.467 94.815 101.522 1.00 40.57 N
ATOM 18 C4 C A1221 14.350 95.319 100.667 1.00 41.36 C
ATOM 19 N4 C A1221 14.242 96.617 100.361 1.00 41.92 N
ATOM 20 C5 C A1221 15.382 94.517 100.093 1.00 40.99 C
ATOM 21 C6 C A1221 15.435 93.228 100.466 1.00 40.59 C
ATOM 22 P C A1222 12.883 89.130 97.869 1.00 41.60 P
ATOM 23 OP1 C A1222 12.910 87.831 97.181 1.00 42.35 O
ATOM 24 OP2 C A1222 13.305 90.357 97.136 1.00 42.54 O
ATOM 25 O5' C A1222 11.419 89.436 98.373 1.00 41.79 O
TER
ATOM 1 O3' G B1219 18.493 98.361 97.680 1.00 36.77 O
ATOM 2 P A B1220 17.642 97.006 97.634 1.00 36.46 P
ATOM 3 OP1 A B1220 17.677 96.405 96.274 1.00 34.46 O
ATOM 4 OP2 A B1220 16.336 97.359 98.237 1.00 33.15 O
ATOM 5 O5' A B1220 18.445 96.037 98.606 1.00 35.44 O
ATOM 6 C5' A B1220 19.573 95.271 98.138 1.00 37.59 C
ATOM 7 C4' A B1220 19.949 94.230 99.172 1.00 39.98 C
ATOM 8 O4' A B1220 20.407 94.890 100.379 1.00 40.77 O
ATOM 9 C3' A B1220 18.790 93.333 99.593 1.00 40.06 C
ATOM 10 O3' A B1220 18.934 92.075 98.958 1.00 39.88 O
ATOM 11 C2' A B1220 18.946 93.184 101.102 1.00 39.69 C
ATOM 12 O2' A B1220 19.808 92.131 101.459 1.00 40.79 O
ATOM 13 C1' A B1220 19.588 94.516 101.468 1.00 40.22 C
ATOM 14 N9 A B1220 18.647 95.605 101.731 1.00 39.62 N
ATOM 15 C8 A B1220 18.719 96.896 101.267 1.00 38.92 C
ATOM 16 N7 A B1220 17.795 97.682 101.751 1.00 38.84 N
ATOM 17 C5 A B1220 17.045 96.853 102.567 1.00 37.55 C
ATOM 18 C6 A B1220 15.931 97.101 103.375 1.00 36.89 C
ATOM 19 N6 A B1220 15.358 98.304 103.501 1.00 34.47 N
ATOM 20 N1 A B1220 15.421 96.065 104.064 1.00 36.61 N
ATOM 21 C2 A B1220 16.005 94.864 103.944 1.00 36.25 C
ATOM 22 N3 A B1220 17.061 94.508 103.220 1.00 36.80 N
ATOM 23 C4 A B1220 17.541 95.563 102.547 1.00 37.99 C
ATOM 24 P C B1221 17.851 91.604 97.895 1.00 40.26 P
ATOM 25 OP1 C B1221 18.456 90.455 97.193 1.00 39.64 O
ATOM 26 OP2 C B1221 17.464 92.809 97.131 1.00 43.93 O
ATOM 27 O5' C B1221 16.628 91.084 98.769 1.00 39.03 O
TER
ATOM 2 P C A1221 17.851 91.604 97.895 1.00 40.26 P
ATOM 3 OP1 C A1221 18.456 90.455 97.193 1.00 39.64 O
ATOM 4 OP2 C A1221 17.464 92.809 97.131 1.00 43.93 O
ATOM 5 O5' C A1221 16.628 91.084 98.769 1.00 39.03 O
ATOM 6 C5' C A1221 16.701 89.811 99.444 1.00 39.34 C
ATOM 7 C4' C A1221 15.612 89.722 100.464 1.00 39.91 C
ATOM 8 O4' C A1221 15.818 90.743 101.468 1.00 38.41 O
ATOM 9 C3' C A1221 14.250 90.055 99.892 1.00 40.59 C
ATOM 10 O3' C A1221 13.700 88.928 99.231 1.00 42.27 O
ATOM 11 C2' C A1221 13.503 90.462 101.141 1.00 40.63 C
ATOM 12 O2' C A1221 13.238 89.335 101.956 1.00 39.54 O
ATOM 13 C1' C A1221 14.575 91.308 101.821 1.00 39.56 C
ATOM 14 N1 C A1221 14.532 92.715 101.360 1.00 40.29 N
ATOM 15 C2 C A1221 13.538 93.519 101.875 1.00 40.60 C
ATOM 16 O2 C A1221 12.728 93.018 102.652 1.00 42.26 O
ATOM 17 N3 C A1221 13.467 94.815 101.522 1.00 40.57 N
ATOM 18 C4 C A1221 14.350 95.319 100.667 1.00 41.36 C
ATOM 19 N4 C A1221 14.242 96.617 100.361 1.00 41.92 N
ATOM 20 C5 C A1221 15.382 94.517 100.093 1.00 40.99 C
ATOM 21 C6 C A1221 15.435 93.228 100.466 1.00 40.59 C
ATOM 22 P C A1222 12.883 89.130 97.869 1.00 41.60 P
ATOM 23 OP1 C A1222 12.910 87.831 97.181 1.00 42.35 O
ATOM 24 OP2 C A1222 13.305 90.357 97.136 1.00 42.54 O
ATOM 25 O5' C A1222 11.419 89.436 98.373 1.00 41.79 O
TER
ATOM 1 O3' G B1219 18.493 98.361 97.680 1.00 36.77 O
ATOM 2 P A B1220 17.642 97.006 97.634 1.00 36.46 P
ATOM 3 OP1 A B1220 17.677 96.405 96.274 1.00 34.46 O
ATOM 4 OP2 A B1220 16.336 97.359 98.237 1.00 33.15 O
ATOM 5 O5' A B1220 18.445 96.037 98.606 1.00 35.44 O
ATOM 6 C5' A B1220 19.573 95.271 98.138 1.00 37.59 C
ATOM 7 C4' A B1220 19.949 94.230 99.172 1.00 39.98 C
ATOM 8 O4' A B1220 20.407 94.890 100.379 1.00 40.77 O
ATOM 9 C3' A B1220 18.790 93.333 99.593 1.00 40.06 C
ATOM 10 O3' A B1220 18.934 92.075 98.958 1.00 39.88 O
ATOM 11 C2' A B1220 18.946 93.184 101.102 1.00 39.69 C
ATOM 12 O2' A B1220 19.808 92.131 101.459 1.00 40.79 O
ATOM 13 C1' A B1220 19.588 94.516 101.468 1.00 40.22 C
ATOM 14 N9 A B1220 18.647 95.605 101.731 1.00 39.62 N
ATOM 15 C8 A B1220 18.719 96.896 101.267 1.00 38.92 C
ATOM 16 N7 A B1220 17.795 97.682 101.751 1.00 38.84 N
ATOM 17 C5 A B1220 17.045 96.853 102.567 1.00 37.55 C
ATOM 18 C6 A B1220 15.931 97.101 103.375 1.00 36.89 C
ATOM 19 N6 A B1220 15.358 98.304 103.501 1.00 34.47 N
ATOM 20 N1 A B1220 15.421 96.065 104.064 1.00 36.61 N
ATOM 21 C2 A B1220 16.005 94.864 103.944 1.00 36.25 C
ATOM 22 N3 A B1220 17.061 94.508 103.220 1.00 36.80 N
ATOM 23 C4 A B1220 17.541 95.563 102.547 1.00 37.99 C
ATOM 24 P C B1221 17.851 91.604 97.895 1.00 40.26 P
ATOM 25 OP1 C B1221 18.456 90.455 97.193 1.00 39.64 O
ATOM 26 OP2 C B1221 17.464 92.809 97.131 1.00 43.93 O
ATOM 27 O5' C B1221 16.628 91.084 98.769 1.00 39.03 O
TER
Atoms:
C2: (13.538,93.519,101.875)
OP1: (18.456,90.455,97.193)
OP2: (17.464,92.809,97.131)
C4: (14.350,95.319,100.667)
O5': (16.628,91.084,98.769)
C3': (14.250,90.055,99.892)
C1': (14.575,91.308,101.821)
O4': (15.818,90.743,101.468)
C5': (16.701,89.811,99.444)
P: (17.851,91.604,97.895)
O2: (12.728,93.018,102.652)
C4': (15.612,89.722,100.464)
C2': (13.503,90.462,101.141)
O2': (13.238,89.335,101.956)
N1: (14.532,92.715,101.360)
N3: (13.467,94.815,101.522)
N4: (14.242,96.617,100.361)
C6: (15.435,93.228,100.466)
C5: (15.382,94.517,100.093)
O3': (13.700,88.928,99.231)
OP1: (18.456,90.455,97.193)
OP2: (17.464,92.809,97.131)
C4: (14.350,95.319,100.667)
O5': (16.628,91.084,98.769)
C3': (14.250,90.055,99.892)
C1': (14.575,91.308,101.821)
O4': (15.818,90.743,101.468)
C5': (16.701,89.811,99.444)
P: (17.851,91.604,97.895)
O2: (12.728,93.018,102.652)
C4': (15.612,89.722,100.464)
C2': (13.503,90.462,101.141)
O2': (13.238,89.335,101.956)
N1: (14.532,92.715,101.360)
N3: (13.467,94.815,101.522)
N4: (14.242,96.617,100.361)
C6: (15.435,93.228,100.466)
C5: (15.382,94.517,100.093)
O3': (13.700,88.928,99.231)
OP1: (17.677,96.405,96.274)
OP2: (16.336,97.359,98.237)
C3': (18.790,93.333,99.593)
C1': (19.588,94.516,101.468)
C5': (19.573,95.271,98.138)
O4': (20.407,94.890,100.379)
C8: (18.719,96.896,101.267)
O2': (19.808,92.131,101.459)
C6: (15.931,97.101,103.375)
C5: (17.045,96.853,102.567)
C4: (17.541,95.563,102.547)
P: (17.642,97.006,97.634)
C4': (19.949,94.230,99.172)
C2': (18.946,93.184,101.102)
C2: (16.005,94.864,103.944)
N1: (15.421,96.065,104.064)
N3: (17.061,94.508,103.220)
N6: (15.358,98.304,103.501)
N7: (17.795,97.682,101.751)
N9: (18.647,95.605,101.731)
O5': (18.445,96.037,98.606)
O3': (18.934,92.075,98.958)
OP2: (16.336,97.359,98.237)
C3': (18.790,93.333,99.593)
C1': (19.588,94.516,101.468)
C5': (19.573,95.271,98.138)
O4': (20.407,94.890,100.379)
C8: (18.719,96.896,101.267)
O2': (19.808,92.131,101.459)
C6: (15.931,97.101,103.375)
C5: (17.045,96.853,102.567)
C4: (17.541,95.563,102.547)
P: (17.642,97.006,97.634)
C4': (19.949,94.230,99.172)
C2': (18.946,93.184,101.102)
C2: (16.005,94.864,103.944)
N1: (15.421,96.065,104.064)
N3: (17.061,94.508,103.220)
N6: (15.358,98.304,103.501)
N7: (17.795,97.682,101.751)
N9: (18.647,95.605,101.731)
O5': (18.445,96.037,98.606)
O3': (18.934,92.075,98.958)
Image (generated by PyMOL):