ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXE:B53:B52

Extra

PDB:
ATOM 1 O3' A A 52 16.628 -12.054 -6.379 1.00 77.57 O
ATOM 2 P C A 53 16.298 -13.056 -5.176 1.00 77.88 P
ATOM 3 OP1 C A 53 15.859 -14.337 -5.777 1.00 77.25 O
ATOM 4 OP2 C A 53 15.409 -12.358 -4.221 1.00 78.10 O
ATOM 5 O5' C A 53 17.719 -13.237 -4.463 1.00 78.53 O
ATOM 6 C5' C A 53 18.464 -14.441 -4.580 1.00 79.93 C
ATOM 7 C4' C A 53 19.675 -14.389 -3.671 1.00 81.39 C
ATOM 8 O4' C A 53 20.429 -13.175 -3.921 1.00 82.47 O
ATOM 9 C3' C A 53 19.364 -14.303 -2.186 1.00 82.40 C
ATOM 10 O3' C A 53 19.025 -15.576 -1.656 1.00 83.75 O
ATOM 11 C2' C A 53 20.690 -13.770 -1.657 1.00 82.20 C
ATOM 12 O2' C A 53 21.706 -14.751 -1.609 1.00 81.82 O
ATOM 13 C1' C A 53 21.024 -12.723 -2.715 1.00 82.73 C
ATOM 14 N1 C A 53 20.539 -11.341 -2.347 1.00 83.67 N
ATOM 15 C2 C A 53 21.227 -10.594 -1.371 1.00 84.03 C
ATOM 16 O2 C A 53 22.233 -11.062 -0.823 1.00 83.72 O
ATOM 17 N3 C A 53 20.774 -9.354 -1.046 1.00 84.82 N
ATOM 18 C4 C A 53 19.688 -8.855 -1.642 1.00 85.34 C
ATOM 19 N4 C A 53 19.291 -7.631 -1.282 1.00 86.18 N
ATOM 20 C5 C A 53 18.967 -9.592 -2.633 1.00 85.04 C
ATOM 21 C6 C A 53 19.424 -10.812 -2.948 1.00 84.28 C
ATOM 22 P G A 54 18.038 -15.702 -0.397 1.00 85.32 P
ATOM 23 OP1 G A 54 17.725 -17.138 -0.228 1.00 84.65 O
ATOM 24 OP2 G A 54 16.927 -14.734 -0.554 1.00 86.07 O
ATOM 25 O5' G A 54 18.953 -15.219 0.824 1.00 86.49 O
TER

ATOM 1 O3' A B 51 17.399 -5.665 -5.249 1.00 78.49 O
ATOM 2 P A B 52 16.360 -6.596 -4.471 1.00 77.56 P
ATOM 3 OP1 A B 52 15.000 -6.152 -4.856 1.00 78.15 O
ATOM 4 OP2 A B 52 16.739 -6.630 -3.038 1.00 76.82 O
ATOM 5 O5' A B 52 16.647 -8.029 -5.132 1.00 77.04 O
ATOM 6 C5' A B 52 15.747 -8.599 -6.078 1.00 77.64 C
ATOM 7 C4' A B 52 16.380 -9.710 -6.906 1.00 77.54 C
ATOM 8 O4' A B 52 17.270 -9.153 -7.909 1.00 77.60 O
ATOM 9 C3' A B 52 17.197 -10.764 -6.152 1.00 76.85 C
ATOM 10 O3' A B 52 16.628 -12.054 -6.379 1.00 77.57 O
ATOM 11 C2' A B 52 18.587 -10.655 -6.778 1.00 76.29 C
ATOM 12 O2' A B 52 19.259 -11.896 -6.851 1.00 75.27 O
ATOM 13 C1' A B 52 18.220 -10.157 -8.173 1.00 76.55 C
ATOM 14 N9 A B 52 19.307 -9.617 -8.992 1.00 76.21 N
ATOM 15 C8 A B 52 20.616 -9.442 -8.635 1.00 75.67 C
ATOM 16 N7 A B 52 21.363 -8.941 -9.587 1.00 75.86 N
ATOM 17 C5 A B 52 20.491 -8.777 -10.647 1.00 76.21 C
ATOM 18 C6 A B 52 20.668 -8.284 -11.958 1.00 76.67 C
ATOM 19 N6 A B 52 21.844 -7.853 -12.425 1.00 76.52 N
ATOM 20 N1 A B 52 19.587 -8.253 -12.772 1.00 77.08 N
ATOM 21 C2 A B 52 18.409 -8.686 -12.301 1.00 76.92 C
ATOM 22 N3 A B 52 18.125 -9.169 -11.089 1.00 76.71 N
ATOM 23 C4 A B 52 19.217 -9.190 -10.300 1.00 76.40 C
ATOM 24 P C B 53 16.298 -13.056 -5.176 1.00 77.88 P
ATOM 25 OP1 C B 53 15.859 -14.337 -5.777 1.00 77.25 O
ATOM 26 OP2 C B 53 15.409 -12.358 -4.221 1.00 78.10 O
ATOM 27 O5' C B 53 17.719 -13.237 -4.463 1.00 78.53 O
TER

Atoms:
C2: (21.227,-10.594,-1.371)
OP1: (15.859,-14.337,-5.777)
OP2: (15.409,-12.358,-4.221)
C4: (19.688,-8.855,-1.642)
O5': (17.719,-13.237,-4.463)
C3': (19.364,-14.303,-2.186)
C1': (21.024,-12.723,-2.715)
O4': (20.429,-13.175,-3.921)
C5': (18.464,-14.441,-4.580)
P: (16.298,-13.056,-5.176)
O2: (22.233,-11.062,-0.823)
C4': (19.675,-14.389,-3.671)
C2': (20.690,-13.770,-1.657)
O2': (21.706,-14.751,-1.609)
N1: (20.539,-11.341,-2.347)
N3: (20.774,-9.354,-1.046)
N4: (19.291,-7.631,-1.282)
C6: (19.424,-10.812,-2.948)
C5: (18.967,-9.592,-2.633)
O3': (19.025,-15.576,-1.656)
OP1: (15.000,-6.152,-4.856)
OP2: (16.739,-6.630,-3.038)
C3': (17.197,-10.764,-6.152)
C1': (18.220,-10.157,-8.173)
C5': (15.747,-8.599,-6.078)
O4': (17.270,-9.153,-7.909)
C8: (20.616,-9.442,-8.635)
O2': (19.259,-11.896,-6.851)
C6: (20.668,-8.284,-11.958)
C5: (20.491,-8.777,-10.647)
C4: (19.217,-9.190,-10.300)
P: (16.360,-6.596,-4.471)
C4': (16.380,-9.710,-6.906)
C2': (18.587,-10.655,-6.778)
C2: (18.409,-8.686,-12.301)
N1: (19.587,-8.253,-12.772)
N3: (18.125,-9.169,-11.089)
N6: (21.844,-7.853,-12.425)
N7: (21.363,-8.941,-9.587)
N9: (19.307,-9.617,-8.992)
O5': (16.647,-8.029,-5.132)
O3': (16.628,-12.054,-6.379)
Image (generated by PyMOL):
PyMOL image
show in jmol