Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1L3D:A9:A8
Extra
PDB:
ATOM 1 O3' A A 8 36.250 52.462 3.341 1.00 35.42 O
ATOM 2 P C A 9 36.100 53.199 4.750 1.00 32.67 P
ATOM 3 OP1 C A 9 37.292 54.070 4.816 1.00 33.08 O
ATOM 4 OP2 C A 9 35.848 52.190 5.793 1.00 29.76 O
ATOM 5 O5' C A 9 34.822 54.136 4.627 1.00 31.42 O
ATOM 6 C5' C A 9 34.979 55.545 4.416 1.00 26.89 C
ATOM 7 C4' C A 9 33.658 56.252 4.564 1.00 27.99 C
ATOM 8 O4' C A 9 32.695 55.728 3.613 1.00 29.44 O
ATOM 9 C3' C A 9 32.957 56.114 5.897 1.00 29.02 C
ATOM 10 O3' C A 9 33.502 57.024 6.824 1.00 29.57 O
ATOM 11 C2' C A 9 31.515 56.450 5.529 1.00 28.93 C
ATOM 12 O2' C A 9 31.335 57.848 5.380 1.00 27.94 O
ATOM 13 C1' C A 9 31.390 55.797 4.153 1.00 26.44 C
ATOM 14 N1 C A 9 30.886 54.428 4.234 1.00 25.85 N
ATOM 15 C2 C A 9 29.556 54.204 4.591 1.00 27.58 C
ATOM 16 O2 C A 9 28.814 55.169 4.803 1.00 31.00 O
ATOM 17 N3 C A 9 29.109 52.944 4.696 1.00 26.14 N
ATOM 18 C4 C A 9 29.924 51.931 4.455 1.00 25.58 C
ATOM 19 N4 C A 9 29.441 50.725 4.587 1.00 25.96 N
ATOM 20 C5 C A 9 31.276 52.123 4.074 1.00 26.56 C
ATOM 21 C6 C A 9 31.715 53.378 3.979 1.00 26.24 C
ATOM 22 P C A 10 33.371 56.724 8.380 1.00 30.26 P
ATOM 23 OP1 C A 10 33.936 57.904 9.071 1.00 29.19 O
ATOM 24 OP2 C A 10 33.880 55.377 8.638 1.00 26.94 O
ATOM 25 O5' C A 10 31.817 56.736 8.649 1.00 28.53 O
TER
ATOM 1 O3' C B 7 34.157 47.355 4.982 1.00 40.69 O
ATOM 2 P A B 8 33.302 48.253 3.941 1.00 39.54 P
ATOM 3 OP1 A B 8 32.053 48.632 4.600 1.00 39.47 O
ATOM 4 OP2 A B 8 33.248 47.541 2.653 1.00 42.80 O
ATOM 5 O5' A B 8 34.184 49.545 3.677 1.00 37.45 O
ATOM 6 C5' A B 8 35.360 49.467 2.858 1.00 36.82 C
ATOM 7 C4' A B 8 35.449 50.678 1.970 1.00 36.22 C
ATOM 8 O4' A B 8 34.500 50.591 0.881 1.00 37.09 O
ATOM 9 C3' A B 8 35.104 51.969 2.672 1.00 37.10 C
ATOM 10 O3' A B 8 36.250 52.462 3.341 1.00 35.42 O
ATOM 11 C2' A B 8 34.666 52.870 1.521 1.00 36.34 C
ATOM 12 O2' A B 8 35.771 53.465 0.886 1.00 39.03 O
ATOM 13 C1' A B 8 33.986 51.876 0.581 1.00 34.56 C
ATOM 14 N9 A B 8 32.533 51.832 0.739 1.00 33.30 N
ATOM 15 C8 A B 8 31.737 50.729 0.862 1.00 33.12 C
ATOM 16 N7 A B 8 30.468 51.008 1.022 1.00 33.38 N
ATOM 17 C5 A B 8 30.427 52.386 0.992 1.00 33.39 C
ATOM 18 C6 A B 8 29.373 53.291 1.115 1.00 35.51 C
ATOM 19 N6 A B 8 28.100 52.929 1.280 1.00 36.96 N
ATOM 20 N1 A B 8 29.669 54.607 1.057 1.00 37.06 N
ATOM 21 C2 A B 8 30.951 54.969 0.881 1.00 36.13 C
ATOM 22 N3 A B 8 32.030 54.204 0.749 1.00 34.21 N
ATOM 23 C4 A B 8 31.692 52.907 0.813 1.00 33.35 C
ATOM 24 P C B 9 36.100 53.199 4.750 1.00 32.67 P
ATOM 25 OP1 C B 9 37.292 54.070 4.816 1.00 33.08 O
ATOM 26 OP2 C B 9 35.848 52.190 5.793 1.00 29.76 O
ATOM 27 O5' C B 9 34.822 54.136 4.627 1.00 31.42 O
TER
ATOM 2 P C A 9 36.100 53.199 4.750 1.00 32.67 P
ATOM 3 OP1 C A 9 37.292 54.070 4.816 1.00 33.08 O
ATOM 4 OP2 C A 9 35.848 52.190 5.793 1.00 29.76 O
ATOM 5 O5' C A 9 34.822 54.136 4.627 1.00 31.42 O
ATOM 6 C5' C A 9 34.979 55.545 4.416 1.00 26.89 C
ATOM 7 C4' C A 9 33.658 56.252 4.564 1.00 27.99 C
ATOM 8 O4' C A 9 32.695 55.728 3.613 1.00 29.44 O
ATOM 9 C3' C A 9 32.957 56.114 5.897 1.00 29.02 C
ATOM 10 O3' C A 9 33.502 57.024 6.824 1.00 29.57 O
ATOM 11 C2' C A 9 31.515 56.450 5.529 1.00 28.93 C
ATOM 12 O2' C A 9 31.335 57.848 5.380 1.00 27.94 O
ATOM 13 C1' C A 9 31.390 55.797 4.153 1.00 26.44 C
ATOM 14 N1 C A 9 30.886 54.428 4.234 1.00 25.85 N
ATOM 15 C2 C A 9 29.556 54.204 4.591 1.00 27.58 C
ATOM 16 O2 C A 9 28.814 55.169 4.803 1.00 31.00 O
ATOM 17 N3 C A 9 29.109 52.944 4.696 1.00 26.14 N
ATOM 18 C4 C A 9 29.924 51.931 4.455 1.00 25.58 C
ATOM 19 N4 C A 9 29.441 50.725 4.587 1.00 25.96 N
ATOM 20 C5 C A 9 31.276 52.123 4.074 1.00 26.56 C
ATOM 21 C6 C A 9 31.715 53.378 3.979 1.00 26.24 C
ATOM 22 P C A 10 33.371 56.724 8.380 1.00 30.26 P
ATOM 23 OP1 C A 10 33.936 57.904 9.071 1.00 29.19 O
ATOM 24 OP2 C A 10 33.880 55.377 8.638 1.00 26.94 O
ATOM 25 O5' C A 10 31.817 56.736 8.649 1.00 28.53 O
TER
ATOM 1 O3' C B 7 34.157 47.355 4.982 1.00 40.69 O
ATOM 2 P A B 8 33.302 48.253 3.941 1.00 39.54 P
ATOM 3 OP1 A B 8 32.053 48.632 4.600 1.00 39.47 O
ATOM 4 OP2 A B 8 33.248 47.541 2.653 1.00 42.80 O
ATOM 5 O5' A B 8 34.184 49.545 3.677 1.00 37.45 O
ATOM 6 C5' A B 8 35.360 49.467 2.858 1.00 36.82 C
ATOM 7 C4' A B 8 35.449 50.678 1.970 1.00 36.22 C
ATOM 8 O4' A B 8 34.500 50.591 0.881 1.00 37.09 O
ATOM 9 C3' A B 8 35.104 51.969 2.672 1.00 37.10 C
ATOM 10 O3' A B 8 36.250 52.462 3.341 1.00 35.42 O
ATOM 11 C2' A B 8 34.666 52.870 1.521 1.00 36.34 C
ATOM 12 O2' A B 8 35.771 53.465 0.886 1.00 39.03 O
ATOM 13 C1' A B 8 33.986 51.876 0.581 1.00 34.56 C
ATOM 14 N9 A B 8 32.533 51.832 0.739 1.00 33.30 N
ATOM 15 C8 A B 8 31.737 50.729 0.862 1.00 33.12 C
ATOM 16 N7 A B 8 30.468 51.008 1.022 1.00 33.38 N
ATOM 17 C5 A B 8 30.427 52.386 0.992 1.00 33.39 C
ATOM 18 C6 A B 8 29.373 53.291 1.115 1.00 35.51 C
ATOM 19 N6 A B 8 28.100 52.929 1.280 1.00 36.96 N
ATOM 20 N1 A B 8 29.669 54.607 1.057 1.00 37.06 N
ATOM 21 C2 A B 8 30.951 54.969 0.881 1.00 36.13 C
ATOM 22 N3 A B 8 32.030 54.204 0.749 1.00 34.21 N
ATOM 23 C4 A B 8 31.692 52.907 0.813 1.00 33.35 C
ATOM 24 P C B 9 36.100 53.199 4.750 1.00 32.67 P
ATOM 25 OP1 C B 9 37.292 54.070 4.816 1.00 33.08 O
ATOM 26 OP2 C B 9 35.848 52.190 5.793 1.00 29.76 O
ATOM 27 O5' C B 9 34.822 54.136 4.627 1.00 31.42 O
TER
Atoms:
C2: (29.556,54.204,4.591)
OP1: (37.292,54.070,4.816)
OP2: (35.848,52.190,5.793)
C4: (29.924,51.931,4.455)
O5': (34.822,54.136,4.627)
C3': (32.957,56.114,5.897)
C1': (31.390,55.797,4.153)
O4': (32.695,55.728,3.613)
C5': (34.979,55.545,4.416)
P: (36.100,53.199,4.750)
O2: (28.814,55.169,4.803)
C4': (33.658,56.252,4.564)
C2': (31.515,56.450,5.529)
O2': (31.335,57.848,5.380)
N1: (30.886,54.428,4.234)
N3: (29.109,52.944,4.696)
N4: (29.441,50.725,4.587)
C6: (31.715,53.378,3.979)
C5: (31.276,52.123,4.074)
O3': (33.502,57.024,6.824)
OP1: (37.292,54.070,4.816)
OP2: (35.848,52.190,5.793)
C4: (29.924,51.931,4.455)
O5': (34.822,54.136,4.627)
C3': (32.957,56.114,5.897)
C1': (31.390,55.797,4.153)
O4': (32.695,55.728,3.613)
C5': (34.979,55.545,4.416)
P: (36.100,53.199,4.750)
O2: (28.814,55.169,4.803)
C4': (33.658,56.252,4.564)
C2': (31.515,56.450,5.529)
O2': (31.335,57.848,5.380)
N1: (30.886,54.428,4.234)
N3: (29.109,52.944,4.696)
N4: (29.441,50.725,4.587)
C6: (31.715,53.378,3.979)
C5: (31.276,52.123,4.074)
O3': (33.502,57.024,6.824)
OP1: (32.053,48.632,4.600)
OP2: (33.248,47.541,2.653)
C3': (35.104,51.969,2.672)
C1': (33.986,51.876,0.581)
C5': (35.360,49.467,2.858)
O4': (34.500,50.591,0.881)
C8: (31.737,50.729,0.862)
O2': (35.771,53.465,0.886)
C6: (29.373,53.291,1.115)
C5: (30.427,52.386,0.992)
C4: (31.692,52.907,0.813)
P: (33.302,48.253,3.941)
C4': (35.449,50.678,1.970)
C2': (34.666,52.870,1.521)
C2: (30.951,54.969,0.881)
N1: (29.669,54.607,1.057)
N3: (32.030,54.204,0.749)
N6: (28.100,52.929,1.280)
N7: (30.468,51.008,1.022)
N9: (32.533,51.832,0.739)
O5': (34.184,49.545,3.677)
O3': (36.250,52.462,3.341)
OP2: (33.248,47.541,2.653)
C3': (35.104,51.969,2.672)
C1': (33.986,51.876,0.581)
C5': (35.360,49.467,2.858)
O4': (34.500,50.591,0.881)
C8: (31.737,50.729,0.862)
O2': (35.771,53.465,0.886)
C6: (29.373,53.291,1.115)
C5: (30.427,52.386,0.992)
C4: (31.692,52.907,0.813)
P: (33.302,48.253,3.941)
C4': (35.449,50.678,1.970)
C2': (34.666,52.870,1.521)
C2: (30.951,54.969,0.881)
N1: (29.669,54.607,1.057)
N3: (32.030,54.204,0.749)
N6: (28.100,52.929,1.280)
N7: (30.468,51.008,1.022)
N9: (32.533,51.832,0.739)
O5': (34.184,49.545,3.677)
O3': (36.250,52.462,3.341)
Image (generated by PyMOL):