ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1488:A1417

Extra

PDB:
ATOM 1 O3' C A1487 -3.855 -38.630 1.561 1.00 64.81 O
ATOM 2 P C A1488 -3.825 -37.432 0.506 1.00 73.62 P
ATOM 3 OP1 C A1488 -5.054 -37.559 -0.329 1.00 46.26 O
ATOM 4 OP2 C A1488 -2.484 -37.472 -0.159 1.00 67.15 O
ATOM 5 O5' C A1488 -3.928 -36.146 1.452 1.00 58.83 O
ATOM 6 C5' C A1488 -5.154 -35.801 2.067 1.00 54.38 C
ATOM 7 C4' C A1488 -4.993 -35.463 3.531 1.00 56.27 C
ATOM 8 O4' C A1488 -4.709 -36.651 4.309 1.00 52.82 O
ATOM 9 C3' C A1488 -3.873 -34.515 3.902 1.00 52.86 C
ATOM 10 O3' C A1488 -4.172 -33.170 3.605 1.00 60.96 O
ATOM 11 C2' C A1488 -3.717 -34.774 5.393 1.00 55.76 C
ATOM 12 O2' C A1488 -4.689 -34.051 6.126 1.00 49.01 O
ATOM 13 C1' C A1488 -4.033 -36.278 5.491 1.00 58.18 C
ATOM 14 N1 C A1488 -2.809 -37.084 5.609 1.00 63.17 N
ATOM 15 C2 C A1488 -2.145 -37.097 6.831 1.00 59.62 C
ATOM 16 O2 C A1488 -2.618 -36.460 7.775 1.00 64.69 O
ATOM 17 N3 C A1488 -1.008 -37.800 6.954 1.00 58.20 N
ATOM 18 C4 C A1488 -0.545 -38.462 5.904 1.00 59.39 C
ATOM 19 N4 C A1488 0.567 -39.149 6.079 1.00 65.32 N
ATOM 20 C5 C A1488 -1.189 -38.473 4.641 1.00 64.07 C
ATOM 21 C6 C A1488 -2.318 -37.769 4.536 1.00 66.17 C
ATOM 22 P C A1489 -2.990 -32.106 3.427 1.00 71.92 P
ATOM 23 OP1 C A1489 -3.582 -30.883 2.828 1.00 94.79 O
ATOM 24 OP2 C A1489 -1.895 -32.791 2.706 1.00 94.06 O
ATOM 25 O5' C A1489 -2.559 -31.819 4.926 1.00 59.91 O
TER

ATOM 1 O3' G B1416 0.555 -41.133 2.165 1.00 69.60 O
ATOM 2 P C B1417 1.665 -40.052 1.722 1.00 59.95 P
ATOM 3 OP1 C B1417 2.843 -40.805 1.255 1.00 71.38 O
ATOM 4 OP2 C B1417 1.832 -39.091 2.848 1.00 54.61 O
ATOM 5 O5' C B1417 0.961 -39.334 0.487 1.00 84.66 O
ATOM 6 C5' C B1417 1.681 -39.040 -0.702 1.00100.56 C
ATOM 7 C4' C B1417 2.308 -40.274 -1.317 1.00 99.68 C
ATOM 8 O4' C B1417 1.435 -41.423 -1.155 1.00 82.87 O
ATOM 9 C3' C B1417 2.551 -40.213 -2.814 1.00 96.03 C
ATOM 10 O3' C B1417 3.714 -39.501 -3.154 1.00 96.61 O
ATOM 11 C2' C B1417 2.600 -41.674 -3.197 1.00 84.89 C
ATOM 12 O2' C B1417 3.830 -42.250 -2.799 1.00 87.64 O
ATOM 13 C1' C B1417 1.494 -42.233 -2.311 1.00 83.07 C
ATOM 14 N1 C B1417 0.180 -42.167 -2.985 1.00 71.75 N
ATOM 15 C2 C B1417 -0.117 -42.950 -4.119 1.00 68.48 C
ATOM 16 O2 C B1417 0.716 -43.746 -4.578 1.00 71.28 O
ATOM 17 N3 C B1417 -1.334 -42.844 -4.703 1.00 64.37 N
ATOM 18 C4 C B1417 -2.233 -41.992 -4.204 1.00 61.46 C
ATOM 19 N4 C B1417 -3.416 -41.909 -4.807 1.00 59.52 N
ATOM 20 C5 C B1417 -1.972 -41.179 -3.069 1.00 62.76 C
ATOM 21 C6 C B1417 -0.763 -41.301 -2.507 1.00 73.87 C
ATOM 22 P C B1418 3.667 -38.436 -4.337 1.00 62.93 P
ATOM 23 OP1 C B1418 4.958 -37.728 -4.329 1.00 99.70 O
ATOM 24 OP2 C B1418 2.424 -37.649 -4.170 1.00108.73 O
ATOM 25 O5' C B1418 3.557 -39.355 -5.623 1.00 59.77 O
TER

Atoms:
C2: (-2.145,-37.097,6.831)
OP1: (-5.054,-37.559,-0.329)
OP2: (-2.484,-37.472,-0.159)
C4: (-0.545,-38.462,5.904)
O5': (-3.928,-36.146,1.452)
C3': (-3.873,-34.515,3.902)
C1': (-4.033,-36.278,5.491)
O4': (-4.709,-36.651,4.309)
C5': (-5.154,-35.801,2.067)
P: (-3.825,-37.432,0.506)
O2: (-2.618,-36.460,7.775)
C4': (-4.993,-35.463,3.531)
C2': (-3.717,-34.774,5.393)
O2': (-4.689,-34.051,6.126)
N1: (-2.809,-37.084,5.609)
N3: (-1.008,-37.800,6.954)
N4: (0.567,-39.149,6.079)
C6: (-2.318,-37.769,4.536)
C5: (-1.189,-38.473,4.641)
O3': (-4.172,-33.170,3.605)
C2: (-0.117,-42.950,-4.119)
OP1: (2.843,-40.805,1.255)
OP2: (1.832,-39.091,2.848)
C4: (-2.233,-41.992,-4.204)
O5': (0.961,-39.334,0.487)
C3': (2.551,-40.213,-2.814)
C1': (1.494,-42.233,-2.311)
O4': (1.435,-41.423,-1.155)
C5': (1.681,-39.040,-0.702)
P: (1.665,-40.052,1.722)
O2: (0.716,-43.746,-4.578)
C4': (2.308,-40.274,-1.317)
C2': (2.600,-41.674,-3.197)
O2': (3.830,-42.250,-2.799)
N1: (0.180,-42.167,-2.985)
N3: (-1.334,-42.844,-4.703)
N4: (-3.416,-41.909,-4.807)
C6: (-0.763,-41.301,-2.507)
C5: (-1.972,-41.179,-3.069)
O3': (3.714,-39.501,-3.154)
Image (generated by PyMOL):
PyMOL image
show in jmol