Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1224:A1223
Extra
PDB:
ATOM 1 O3' A A1223 -100.062 107.593 85.203 1.00 53.94 O
ATOM 2 P C A1224 -100.508 109.087 85.579 1.00 53.91 P
ATOM 3 OP1 C A1224 -101.405 108.999 86.762 1.00 53.91 O
ATOM 4 OP2 C A1224 -101.020 109.717 84.330 1.00 53.91 O
ATOM 5 O5' C A1224 -99.136 109.765 85.994 1.00 53.91 O
ATOM 6 C5' C A1224 -98.662 109.712 87.339 1.00 53.91 C
ATOM 7 C4' C A1224 -97.360 110.468 87.494 1.00 53.91 C
ATOM 8 O4' C A1224 -96.286 109.681 86.907 1.00 53.91 O
ATOM 9 C3' C A1224 -97.326 111.830 86.811 1.00 53.91 C
ATOM 10 O3' C A1224 -96.586 112.766 87.612 1.00 53.91 O
ATOM 11 C2' C A1224 -96.617 111.544 85.474 1.00 53.91 C
ATOM 12 O2' C A1224 -95.885 112.631 84.951 1.00 53.91 O
ATOM 13 C1' C A1224 -95.709 110.347 85.801 1.00 53.91 C
ATOM 14 N1 C A1224 -95.593 109.342 84.702 1.00 53.51 N
ATOM 15 C2 C A1224 -94.568 108.398 84.776 1.00 53.51 C
ATOM 16 O2 C A1224 -93.808 108.490 85.732 1.00 53.51 O
ATOM 17 N3 C A1224 -94.395 107.429 83.841 1.00 53.51 N
ATOM 18 C4 C A1224 -95.236 107.350 82.817 1.00 53.51 C
ATOM 19 N4 C A1224 -95.056 106.388 81.897 1.00 53.51 N
ATOM 20 C5 C A1224 -96.308 108.289 82.708 1.00 53.51 C
ATOM 21 C6 C A1224 -96.462 109.243 83.652 1.00 53.51 C
ATOM 22 P A A1225 -97.244 113.369 88.964 1.00 70.78 P
ATOM 23 OP1 A A1225 -97.929 112.245 89.654 1.00 70.78 O
ATOM 24 OP2 A A1225 -98.036 114.562 88.579 1.00 70.78 O
ATOM 25 O5' A A1225 -95.984 113.823 89.810 1.00 70.78 O
TER
ATOM 1 O3' U B1222 -99.478 106.912 78.544 1.00 51.98 O
ATOM 2 P A B1223 -98.879 107.607 79.866 1.00 53.94 P
ATOM 3 OP1 A B1223 -99.615 108.884 80.055 1.00 53.94 O
ATOM 4 OP2 A B1223 -97.407 107.648 79.698 1.00 53.94 O
ATOM 5 O5' A B1223 -99.261 106.586 81.030 1.00 53.94 O
ATOM 6 C5' A B1223 -100.536 106.642 81.665 1.00 53.94 C
ATOM 7 C4' A B1223 -100.438 106.382 83.152 1.00 53.94 C
ATOM 8 O4' A B1223 -99.924 105.037 83.374 1.00 53.94 O
ATOM 9 C3' A B1223 -99.516 107.323 83.916 1.00 53.94 C
ATOM 10 O3' A B1223 -100.062 107.593 85.203 1.00 53.94 O
ATOM 11 C2' A B1223 -98.231 106.517 84.056 1.00 53.94 C
ATOM 12 O2' A B1223 -97.436 106.867 85.167 1.00 53.94 O
ATOM 13 C1' A B1223 -98.750 105.088 84.160 1.00 53.94 C
ATOM 14 N9 A B1223 -97.813 104.097 83.638 1.00 53.52 N
ATOM 15 C8 A B1223 -98.035 103.054 82.775 1.00 53.52 C
ATOM 16 N7 A B1223 -96.959 102.360 82.495 1.00 53.52 N
ATOM 17 C5 A B1223 -95.968 103.009 83.217 1.00 53.52 C
ATOM 18 C6 A B1223 -94.591 102.774 83.350 1.00 53.52 C
ATOM 19 N6 A B1223 -93.947 101.769 82.727 1.00 53.52 N
ATOM 20 N1 A B1223 -93.903 103.618 84.160 1.00 53.52 N
ATOM 21 C2 A B1223 -94.545 104.613 84.778 1.00 53.52 C
ATOM 22 N3 A B1223 -95.826 104.926 84.721 1.00 53.52 N
ATOM 23 C4 A B1223 -96.480 104.080 83.917 1.00 53.52 C
ATOM 24 P C B1224 -100.508 109.087 85.579 1.00 53.91 P
ATOM 25 OP1 C B1224 -101.405 108.999 86.762 1.00 53.91 O
ATOM 26 OP2 C B1224 -101.020 109.717 84.330 1.00 53.91 O
ATOM 27 O5' C B1224 -99.136 109.765 85.994 1.00 53.91 O
TER
ATOM 2 P C A1224 -100.508 109.087 85.579 1.00 53.91 P
ATOM 3 OP1 C A1224 -101.405 108.999 86.762 1.00 53.91 O
ATOM 4 OP2 C A1224 -101.020 109.717 84.330 1.00 53.91 O
ATOM 5 O5' C A1224 -99.136 109.765 85.994 1.00 53.91 O
ATOM 6 C5' C A1224 -98.662 109.712 87.339 1.00 53.91 C
ATOM 7 C4' C A1224 -97.360 110.468 87.494 1.00 53.91 C
ATOM 8 O4' C A1224 -96.286 109.681 86.907 1.00 53.91 O
ATOM 9 C3' C A1224 -97.326 111.830 86.811 1.00 53.91 C
ATOM 10 O3' C A1224 -96.586 112.766 87.612 1.00 53.91 O
ATOM 11 C2' C A1224 -96.617 111.544 85.474 1.00 53.91 C
ATOM 12 O2' C A1224 -95.885 112.631 84.951 1.00 53.91 O
ATOM 13 C1' C A1224 -95.709 110.347 85.801 1.00 53.91 C
ATOM 14 N1 C A1224 -95.593 109.342 84.702 1.00 53.51 N
ATOM 15 C2 C A1224 -94.568 108.398 84.776 1.00 53.51 C
ATOM 16 O2 C A1224 -93.808 108.490 85.732 1.00 53.51 O
ATOM 17 N3 C A1224 -94.395 107.429 83.841 1.00 53.51 N
ATOM 18 C4 C A1224 -95.236 107.350 82.817 1.00 53.51 C
ATOM 19 N4 C A1224 -95.056 106.388 81.897 1.00 53.51 N
ATOM 20 C5 C A1224 -96.308 108.289 82.708 1.00 53.51 C
ATOM 21 C6 C A1224 -96.462 109.243 83.652 1.00 53.51 C
ATOM 22 P A A1225 -97.244 113.369 88.964 1.00 70.78 P
ATOM 23 OP1 A A1225 -97.929 112.245 89.654 1.00 70.78 O
ATOM 24 OP2 A A1225 -98.036 114.562 88.579 1.00 70.78 O
ATOM 25 O5' A A1225 -95.984 113.823 89.810 1.00 70.78 O
TER
ATOM 1 O3' U B1222 -99.478 106.912 78.544 1.00 51.98 O
ATOM 2 P A B1223 -98.879 107.607 79.866 1.00 53.94 P
ATOM 3 OP1 A B1223 -99.615 108.884 80.055 1.00 53.94 O
ATOM 4 OP2 A B1223 -97.407 107.648 79.698 1.00 53.94 O
ATOM 5 O5' A B1223 -99.261 106.586 81.030 1.00 53.94 O
ATOM 6 C5' A B1223 -100.536 106.642 81.665 1.00 53.94 C
ATOM 7 C4' A B1223 -100.438 106.382 83.152 1.00 53.94 C
ATOM 8 O4' A B1223 -99.924 105.037 83.374 1.00 53.94 O
ATOM 9 C3' A B1223 -99.516 107.323 83.916 1.00 53.94 C
ATOM 10 O3' A B1223 -100.062 107.593 85.203 1.00 53.94 O
ATOM 11 C2' A B1223 -98.231 106.517 84.056 1.00 53.94 C
ATOM 12 O2' A B1223 -97.436 106.867 85.167 1.00 53.94 O
ATOM 13 C1' A B1223 -98.750 105.088 84.160 1.00 53.94 C
ATOM 14 N9 A B1223 -97.813 104.097 83.638 1.00 53.52 N
ATOM 15 C8 A B1223 -98.035 103.054 82.775 1.00 53.52 C
ATOM 16 N7 A B1223 -96.959 102.360 82.495 1.00 53.52 N
ATOM 17 C5 A B1223 -95.968 103.009 83.217 1.00 53.52 C
ATOM 18 C6 A B1223 -94.591 102.774 83.350 1.00 53.52 C
ATOM 19 N6 A B1223 -93.947 101.769 82.727 1.00 53.52 N
ATOM 20 N1 A B1223 -93.903 103.618 84.160 1.00 53.52 N
ATOM 21 C2 A B1223 -94.545 104.613 84.778 1.00 53.52 C
ATOM 22 N3 A B1223 -95.826 104.926 84.721 1.00 53.52 N
ATOM 23 C4 A B1223 -96.480 104.080 83.917 1.00 53.52 C
ATOM 24 P C B1224 -100.508 109.087 85.579 1.00 53.91 P
ATOM 25 OP1 C B1224 -101.405 108.999 86.762 1.00 53.91 O
ATOM 26 OP2 C B1224 -101.020 109.717 84.330 1.00 53.91 O
ATOM 27 O5' C B1224 -99.136 109.765 85.994 1.00 53.91 O
TER
Atoms:
C2: (-94.568,108.398,84.776)
OP1: (-101.405,108.999,86.762)
OP2: (-101.020,109.717,84.330)
C4: (-95.236,107.350,82.817)
O5': (-99.136,109.765,85.994)
C3': (-97.326,111.830,86.811)
C1': (-95.709,110.347,85.801)
O4': (-96.286,109.681,86.907)
C5': (-98.662,109.712,87.339)
P: (-100.508,109.087,85.579)
O2: (-93.808,108.490,85.732)
C4': (-97.360,110.468,87.494)
C2': (-96.617,111.544,85.474)
O2': (-95.885,112.631,84.951)
N1: (-95.593,109.342,84.702)
N3: (-94.395,107.429,83.841)
N4: (-95.056,106.388,81.897)
C6: (-96.462,109.243,83.652)
C5: (-96.308,108.289,82.708)
O3': (-96.586,112.766,87.612)
OP1: (-101.405,108.999,86.762)
OP2: (-101.020,109.717,84.330)
C4: (-95.236,107.350,82.817)
O5': (-99.136,109.765,85.994)
C3': (-97.326,111.830,86.811)
C1': (-95.709,110.347,85.801)
O4': (-96.286,109.681,86.907)
C5': (-98.662,109.712,87.339)
P: (-100.508,109.087,85.579)
O2: (-93.808,108.490,85.732)
C4': (-97.360,110.468,87.494)
C2': (-96.617,111.544,85.474)
O2': (-95.885,112.631,84.951)
N1: (-95.593,109.342,84.702)
N3: (-94.395,107.429,83.841)
N4: (-95.056,106.388,81.897)
C6: (-96.462,109.243,83.652)
C5: (-96.308,108.289,82.708)
O3': (-96.586,112.766,87.612)
OP1: (-99.615,108.884,80.055)
OP2: (-97.407,107.648,79.698)
C3': (-99.516,107.323,83.916)
C1': (-98.750,105.088,84.160)
C5': (-100.536,106.642,81.665)
O4': (-99.924,105.037,83.374)
C8: (-98.035,103.054,82.775)
O2': (-97.436,106.867,85.167)
C6: (-94.591,102.774,83.350)
C5: (-95.968,103.009,83.217)
C4: (-96.480,104.080,83.917)
P: (-98.879,107.607,79.866)
C4': (-100.438,106.382,83.152)
C2': (-98.231,106.517,84.056)
C2: (-94.545,104.613,84.778)
N1: (-93.903,103.618,84.160)
N3: (-95.826,104.926,84.721)
N6: (-93.947,101.769,82.727)
N7: (-96.959,102.360,82.495)
N9: (-97.813,104.097,83.638)
O5': (-99.261,106.586,81.030)
O3': (-100.062,107.593,85.203)
OP2: (-97.407,107.648,79.698)
C3': (-99.516,107.323,83.916)
C1': (-98.750,105.088,84.160)
C5': (-100.536,106.642,81.665)
O4': (-99.924,105.037,83.374)
C8: (-98.035,103.054,82.775)
O2': (-97.436,106.867,85.167)
C6: (-94.591,102.774,83.350)
C5: (-95.968,103.009,83.217)
C4: (-96.480,104.080,83.917)
P: (-98.879,107.607,79.866)
C4': (-100.438,106.382,83.152)
C2': (-98.231,106.517,84.056)
C2: (-94.545,104.613,84.778)
N1: (-93.903,103.618,84.160)
N3: (-95.826,104.926,84.721)
N6: (-93.947,101.769,82.727)
N7: (-96.959,102.360,82.495)
N9: (-97.813,104.097,83.638)
O5': (-99.261,106.586,81.030)
O3': (-100.062,107.593,85.203)
Image (generated by PyMOL):