Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01039:01038
Extra
PDB:
ATOM 1 O3' A A1038 34.622 110.011 106.426 1.00 48.08 O
ATOM 2 P C A1039 34.205 108.892 105.350 1.00 47.88 P
ATOM 3 OP1 C A1039 34.054 109.596 104.058 1.00 47.06 O
ATOM 4 OP2 C A1039 33.081 108.085 105.884 1.00 49.91 O
ATOM 5 O5' C A1039 35.455 107.916 105.283 1.00 49.47 O
ATOM 6 C5' C A1039 36.655 108.257 104.575 1.00 52.05 C
ATOM 7 C4' C A1039 37.724 107.252 104.909 1.00 54.15 C
ATOM 8 O4' C A1039 38.007 107.349 106.331 1.00 55.41 O
ATOM 9 C3' C A1039 37.279 105.803 104.750 1.00 58.00 C
ATOM 10 O3' C A1039 37.384 105.228 103.454 1.00 60.93 O
ATOM 11 C2' C A1039 38.240 105.089 105.681 1.00 59.69 C
ATOM 12 O2' C A1039 39.544 104.987 105.126 1.00 61.92 O
ATOM 13 C1' C A1039 38.249 106.053 106.863 1.00 57.36 C
ATOM 14 N1 C A1039 37.185 105.726 107.838 1.00 56.10 N
ATOM 15 C2 C A1039 37.506 104.922 108.943 1.00 55.37 C
ATOM 16 O2 C A1039 38.656 104.473 109.048 1.00 58.00 O
ATOM 17 N3 C A1039 36.556 104.658 109.867 1.00 54.69 N
ATOM 18 C4 C A1039 35.327 105.158 109.724 1.00 54.55 C
ATOM 19 N4 C A1039 34.439 104.911 110.686 1.00 52.04 N
ATOM 20 C5 C A1039 34.960 105.944 108.594 1.00 54.82 C
ATOM 21 C6 C A1039 35.912 106.201 107.684 1.00 55.67 C
ATOM 22 P A A1040 38.127 106.008 102.271 1.00 61.23 P
ATOM 23 OP1 A A1040 39.427 106.492 102.808 1.00 60.21 O
ATOM 24 OP2 A A1040 37.165 106.962 101.665 1.00 59.42 O
ATOM 25 O5' A A1040 38.452 104.845 101.239 1.00 54.49 O
TER
ATOM 1 O3' A B1037 31.290 108.477 111.393 1.00 44.04 O
ATOM 2 P A B1038 31.570 107.543 110.119 1.00 44.40 P
ATOM 3 OP1 A B1038 30.312 107.569 109.348 1.00 47.98 O
ATOM 4 OP2 A B1038 32.143 106.246 110.554 1.00 43.76 O
ATOM 5 O5' A B1038 32.704 108.317 109.307 1.00 46.47 O
ATOM 6 C5' A B1038 32.495 109.657 108.828 1.00 46.06 C
ATOM 7 C4' A B1038 33.822 110.362 108.669 1.00 47.23 C
ATOM 8 O4' A B1038 34.477 110.408 109.956 1.00 46.52 O
ATOM 9 C3' A B1038 34.841 109.652 107.788 1.00 46.39 C
ATOM 10 O3' A B1038 34.622 110.011 106.426 1.00 48.08 O
ATOM 11 C2' A B1038 36.172 110.226 108.280 1.00 45.80 C
ATOM 12 O2' A B1038 36.516 111.433 107.634 1.00 44.66 O
ATOM 13 C1' A B1038 35.872 110.524 109.757 1.00 43.35 C
ATOM 14 N9 A B1038 36.546 109.685 110.742 1.00 40.91 N
ATOM 15 C8 A B1038 36.498 108.319 110.868 1.00 40.84 C
ATOM 16 N7 A B1038 37.212 107.857 111.866 1.00 39.24 N
ATOM 17 C5 A B1038 37.766 108.993 112.434 1.00 37.42 C
ATOM 18 C6 A B1038 38.620 109.172 113.518 1.00 37.71 C
ATOM 19 N6 A B1038 39.081 108.167 114.266 1.00 36.84 N
ATOM 20 N1 A B1038 38.994 110.432 113.821 1.00 38.04 N
ATOM 21 C2 A B1038 38.528 111.436 113.076 1.00 37.45 C
ATOM 22 N3 A B1038 37.715 111.394 112.030 1.00 39.31 N
ATOM 23 C4 A B1038 37.366 110.126 111.755 1.00 38.94 C
ATOM 24 P C B1039 34.205 108.892 105.350 1.00 47.88 P
ATOM 25 OP1 C B1039 34.054 109.596 104.058 1.00 47.06 O
ATOM 26 OP2 C B1039 33.081 108.085 105.884 1.00 49.91 O
ATOM 27 O5' C B1039 35.455 107.916 105.283 1.00 49.47 O
TER
ATOM 2 P C A1039 34.205 108.892 105.350 1.00 47.88 P
ATOM 3 OP1 C A1039 34.054 109.596 104.058 1.00 47.06 O
ATOM 4 OP2 C A1039 33.081 108.085 105.884 1.00 49.91 O
ATOM 5 O5' C A1039 35.455 107.916 105.283 1.00 49.47 O
ATOM 6 C5' C A1039 36.655 108.257 104.575 1.00 52.05 C
ATOM 7 C4' C A1039 37.724 107.252 104.909 1.00 54.15 C
ATOM 8 O4' C A1039 38.007 107.349 106.331 1.00 55.41 O
ATOM 9 C3' C A1039 37.279 105.803 104.750 1.00 58.00 C
ATOM 10 O3' C A1039 37.384 105.228 103.454 1.00 60.93 O
ATOM 11 C2' C A1039 38.240 105.089 105.681 1.00 59.69 C
ATOM 12 O2' C A1039 39.544 104.987 105.126 1.00 61.92 O
ATOM 13 C1' C A1039 38.249 106.053 106.863 1.00 57.36 C
ATOM 14 N1 C A1039 37.185 105.726 107.838 1.00 56.10 N
ATOM 15 C2 C A1039 37.506 104.922 108.943 1.00 55.37 C
ATOM 16 O2 C A1039 38.656 104.473 109.048 1.00 58.00 O
ATOM 17 N3 C A1039 36.556 104.658 109.867 1.00 54.69 N
ATOM 18 C4 C A1039 35.327 105.158 109.724 1.00 54.55 C
ATOM 19 N4 C A1039 34.439 104.911 110.686 1.00 52.04 N
ATOM 20 C5 C A1039 34.960 105.944 108.594 1.00 54.82 C
ATOM 21 C6 C A1039 35.912 106.201 107.684 1.00 55.67 C
ATOM 22 P A A1040 38.127 106.008 102.271 1.00 61.23 P
ATOM 23 OP1 A A1040 39.427 106.492 102.808 1.00 60.21 O
ATOM 24 OP2 A A1040 37.165 106.962 101.665 1.00 59.42 O
ATOM 25 O5' A A1040 38.452 104.845 101.239 1.00 54.49 O
TER
ATOM 1 O3' A B1037 31.290 108.477 111.393 1.00 44.04 O
ATOM 2 P A B1038 31.570 107.543 110.119 1.00 44.40 P
ATOM 3 OP1 A B1038 30.312 107.569 109.348 1.00 47.98 O
ATOM 4 OP2 A B1038 32.143 106.246 110.554 1.00 43.76 O
ATOM 5 O5' A B1038 32.704 108.317 109.307 1.00 46.47 O
ATOM 6 C5' A B1038 32.495 109.657 108.828 1.00 46.06 C
ATOM 7 C4' A B1038 33.822 110.362 108.669 1.00 47.23 C
ATOM 8 O4' A B1038 34.477 110.408 109.956 1.00 46.52 O
ATOM 9 C3' A B1038 34.841 109.652 107.788 1.00 46.39 C
ATOM 10 O3' A B1038 34.622 110.011 106.426 1.00 48.08 O
ATOM 11 C2' A B1038 36.172 110.226 108.280 1.00 45.80 C
ATOM 12 O2' A B1038 36.516 111.433 107.634 1.00 44.66 O
ATOM 13 C1' A B1038 35.872 110.524 109.757 1.00 43.35 C
ATOM 14 N9 A B1038 36.546 109.685 110.742 1.00 40.91 N
ATOM 15 C8 A B1038 36.498 108.319 110.868 1.00 40.84 C
ATOM 16 N7 A B1038 37.212 107.857 111.866 1.00 39.24 N
ATOM 17 C5 A B1038 37.766 108.993 112.434 1.00 37.42 C
ATOM 18 C6 A B1038 38.620 109.172 113.518 1.00 37.71 C
ATOM 19 N6 A B1038 39.081 108.167 114.266 1.00 36.84 N
ATOM 20 N1 A B1038 38.994 110.432 113.821 1.00 38.04 N
ATOM 21 C2 A B1038 38.528 111.436 113.076 1.00 37.45 C
ATOM 22 N3 A B1038 37.715 111.394 112.030 1.00 39.31 N
ATOM 23 C4 A B1038 37.366 110.126 111.755 1.00 38.94 C
ATOM 24 P C B1039 34.205 108.892 105.350 1.00 47.88 P
ATOM 25 OP1 C B1039 34.054 109.596 104.058 1.00 47.06 O
ATOM 26 OP2 C B1039 33.081 108.085 105.884 1.00 49.91 O
ATOM 27 O5' C B1039 35.455 107.916 105.283 1.00 49.47 O
TER
Atoms:
C2: (37.506,104.922,108.943)
OP1: (34.054,109.596,104.058)
OP2: (33.081,108.085,105.884)
C4: (35.327,105.158,109.724)
O5': (35.455,107.916,105.283)
C3': (37.279,105.803,104.750)
C1': (38.249,106.053,106.863)
O4': (38.007,107.349,106.331)
C5': (36.655,108.257,104.575)
P: (34.205,108.892,105.350)
O2: (38.656,104.473,109.048)
C4': (37.724,107.252,104.909)
C2': (38.240,105.089,105.681)
O2': (39.544,104.987,105.126)
N1: (37.185,105.726,107.838)
N3: (36.556,104.658,109.867)
N4: (34.439,104.911,110.686)
C6: (35.912,106.201,107.684)
C5: (34.960,105.944,108.594)
O3': (37.384,105.228,103.454)
OP1: (34.054,109.596,104.058)
OP2: (33.081,108.085,105.884)
C4: (35.327,105.158,109.724)
O5': (35.455,107.916,105.283)
C3': (37.279,105.803,104.750)
C1': (38.249,106.053,106.863)
O4': (38.007,107.349,106.331)
C5': (36.655,108.257,104.575)
P: (34.205,108.892,105.350)
O2: (38.656,104.473,109.048)
C4': (37.724,107.252,104.909)
C2': (38.240,105.089,105.681)
O2': (39.544,104.987,105.126)
N1: (37.185,105.726,107.838)
N3: (36.556,104.658,109.867)
N4: (34.439,104.911,110.686)
C6: (35.912,106.201,107.684)
C5: (34.960,105.944,108.594)
O3': (37.384,105.228,103.454)
OP1: (30.312,107.569,109.348)
OP2: (32.143,106.246,110.554)
C3': (34.841,109.652,107.788)
C1': (35.872,110.524,109.757)
C5': (32.495,109.657,108.828)
O4': (34.477,110.408,109.956)
C8: (36.498,108.319,110.868)
O2': (36.516,111.433,107.634)
C6: (38.620,109.172,113.518)
C5: (37.766,108.993,112.434)
C4: (37.366,110.126,111.755)
P: (31.570,107.543,110.119)
C4': (33.822,110.362,108.669)
C2': (36.172,110.226,108.280)
C2: (38.528,111.436,113.076)
N1: (38.994,110.432,113.821)
N3: (37.715,111.394,112.030)
N6: (39.081,108.167,114.266)
N7: (37.212,107.857,111.866)
N9: (36.546,109.685,110.742)
O5': (32.704,108.317,109.307)
O3': (34.622,110.011,106.426)
OP2: (32.143,106.246,110.554)
C3': (34.841,109.652,107.788)
C1': (35.872,110.524,109.757)
C5': (32.495,109.657,108.828)
O4': (34.477,110.408,109.956)
C8: (36.498,108.319,110.868)
O2': (36.516,111.433,107.634)
C6: (38.620,109.172,113.518)
C5: (37.766,108.993,112.434)
C4: (37.366,110.126,111.755)
P: (31.570,107.543,110.119)
C4': (33.822,110.362,108.669)
C2': (36.172,110.226,108.280)
C2: (38.528,111.436,113.076)
N1: (38.994,110.432,113.821)
N3: (37.715,111.394,112.030)
N6: (39.081,108.167,114.266)
N7: (37.212,107.857,111.866)
N9: (36.546,109.685,110.742)
O5': (32.704,108.317,109.307)
O3': (34.622,110.011,106.426)
Image (generated by PyMOL):