Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02091:02090
Extra
PDB:
ATOM 1 O3' A A2090 113.413 117.782 31.148 1.00 76.57 O
ATOM 2 P C A2091 113.071 119.181 31.870 1.00 77.07 P
ATOM 3 OP1 C A2091 111.700 119.554 31.428 1.00 75.51 O
ATOM 4 OP2 C A2091 114.195 120.137 31.658 1.00 76.33 O
ATOM 5 O5' C A2091 113.041 118.820 33.422 1.00 74.17 O
ATOM 6 C5' C A2091 111.869 118.253 34.036 1.00 70.98 C
ATOM 7 C4' C A2091 112.145 117.947 35.488 1.00 70.30 C
ATOM 8 O4' C A2091 113.202 116.953 35.560 1.00 69.78 O
ATOM 9 C3' C A2091 112.666 119.111 36.323 1.00 69.90 C
ATOM 10 O3' C A2091 111.629 119.960 36.811 1.00 69.56 O
ATOM 11 C2' C A2091 113.420 118.399 37.437 1.00 69.62 C
ATOM 12 O2' C A2091 112.579 117.900 38.455 1.00 69.22 O
ATOM 13 C1' C A2091 114.045 117.234 36.667 1.00 70.77 C
ATOM 14 N1 C A2091 115.386 117.568 36.158 1.00 72.28 N
ATOM 15 C2 C A2091 116.507 117.255 36.945 1.00 73.16 C
ATOM 16 O2 C A2091 116.340 116.693 38.044 1.00 71.86 O
ATOM 17 N3 C A2091 117.740 117.576 36.489 1.00 73.86 N
ATOM 18 C4 C A2091 117.879 118.183 35.306 1.00 73.83 C
ATOM 19 N4 C A2091 119.114 118.482 34.900 1.00 74.56 N
ATOM 20 C5 C A2091 116.757 118.509 34.486 1.00 73.22 C
ATOM 21 C6 C A2091 115.545 118.184 34.943 1.00 72.58 C
ATOM 22 P U A2092 111.972 121.473 37.243 1.00 70.50 P
ATOM 23 OP1 U A2092 110.719 122.089 37.740 1.00 70.23 O
ATOM 24 OP2 U A2092 112.736 122.139 36.156 1.00 68.46 O
ATOM 25 O5' U A2092 112.953 121.304 38.482 1.00 70.91 O
TER
ATOM 1 O3' C B2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 2 P A B2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 3 OP1 A B2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 4 OP2 A B2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 5 O5' A B2090 117.276 118.130 30.977 1.00 80.95 O
ATOM 6 C5' A B2090 116.385 117.807 29.888 1.00 79.02 C
ATOM 7 C4' A B2090 115.425 116.722 30.312 1.00 77.77 C
ATOM 8 O4' A B2090 116.188 115.555 30.713 1.00 77.73 O
ATOM 9 C3' A B2090 114.577 117.054 31.528 1.00 76.98 C
ATOM 10 O3' A B2090 113.413 117.782 31.148 1.00 76.57 O
ATOM 11 C2' A B2090 114.255 115.673 32.084 1.00 76.74 C
ATOM 12 O2' A B2090 113.247 115.003 31.354 1.00 76.17 O
ATOM 13 C1' A B2090 115.571 114.938 31.830 1.00 77.04 C
ATOM 14 N9 A B2090 116.522 114.949 32.945 1.00 77.58 N
ATOM 15 C8 A B2090 117.833 115.357 32.916 1.00 77.51 C
ATOM 16 N7 A B2090 118.466 115.184 34.050 1.00 78.57 N
ATOM 17 C5 A B2090 117.506 114.639 34.891 1.00 79.05 C
ATOM 18 C6 A B2090 117.549 114.211 36.238 1.00 78.92 C
ATOM 19 N6 A B2090 118.646 114.253 37.002 1.00 79.36 N
ATOM 20 N1 A B2090 116.414 113.730 36.777 1.00 77.75 N
ATOM 21 C2 A B2090 115.317 113.678 36.016 1.00 78.35 C
ATOM 22 N3 A B2090 115.151 114.036 34.744 1.00 78.80 N
ATOM 23 C4 A B2090 116.297 114.511 34.230 1.00 78.41 C
ATOM 24 P C B2091 113.071 119.181 31.870 1.00 77.07 P
ATOM 25 OP1 C B2091 111.700 119.554 31.428 1.00 75.51 O
ATOM 26 OP2 C B2091 114.195 120.137 31.658 1.00 76.33 O
ATOM 27 O5' C B2091 113.041 118.820 33.422 1.00 74.17 O
TER
ATOM 2 P C A2091 113.071 119.181 31.870 1.00 77.07 P
ATOM 3 OP1 C A2091 111.700 119.554 31.428 1.00 75.51 O
ATOM 4 OP2 C A2091 114.195 120.137 31.658 1.00 76.33 O
ATOM 5 O5' C A2091 113.041 118.820 33.422 1.00 74.17 O
ATOM 6 C5' C A2091 111.869 118.253 34.036 1.00 70.98 C
ATOM 7 C4' C A2091 112.145 117.947 35.488 1.00 70.30 C
ATOM 8 O4' C A2091 113.202 116.953 35.560 1.00 69.78 O
ATOM 9 C3' C A2091 112.666 119.111 36.323 1.00 69.90 C
ATOM 10 O3' C A2091 111.629 119.960 36.811 1.00 69.56 O
ATOM 11 C2' C A2091 113.420 118.399 37.437 1.00 69.62 C
ATOM 12 O2' C A2091 112.579 117.900 38.455 1.00 69.22 O
ATOM 13 C1' C A2091 114.045 117.234 36.667 1.00 70.77 C
ATOM 14 N1 C A2091 115.386 117.568 36.158 1.00 72.28 N
ATOM 15 C2 C A2091 116.507 117.255 36.945 1.00 73.16 C
ATOM 16 O2 C A2091 116.340 116.693 38.044 1.00 71.86 O
ATOM 17 N3 C A2091 117.740 117.576 36.489 1.00 73.86 N
ATOM 18 C4 C A2091 117.879 118.183 35.306 1.00 73.83 C
ATOM 19 N4 C A2091 119.114 118.482 34.900 1.00 74.56 N
ATOM 20 C5 C A2091 116.757 118.509 34.486 1.00 73.22 C
ATOM 21 C6 C A2091 115.545 118.184 34.943 1.00 72.58 C
ATOM 22 P U A2092 111.972 121.473 37.243 1.00 70.50 P
ATOM 23 OP1 U A2092 110.719 122.089 37.740 1.00 70.23 O
ATOM 24 OP2 U A2092 112.736 122.139 36.156 1.00 68.46 O
ATOM 25 O5' U A2092 112.953 121.304 38.482 1.00 70.91 O
TER
ATOM 1 O3' C B2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 2 P A B2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 3 OP1 A B2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 4 OP2 A B2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 5 O5' A B2090 117.276 118.130 30.977 1.00 80.95 O
ATOM 6 C5' A B2090 116.385 117.807 29.888 1.00 79.02 C
ATOM 7 C4' A B2090 115.425 116.722 30.312 1.00 77.77 C
ATOM 8 O4' A B2090 116.188 115.555 30.713 1.00 77.73 O
ATOM 9 C3' A B2090 114.577 117.054 31.528 1.00 76.98 C
ATOM 10 O3' A B2090 113.413 117.782 31.148 1.00 76.57 O
ATOM 11 C2' A B2090 114.255 115.673 32.084 1.00 76.74 C
ATOM 12 O2' A B2090 113.247 115.003 31.354 1.00 76.17 O
ATOM 13 C1' A B2090 115.571 114.938 31.830 1.00 77.04 C
ATOM 14 N9 A B2090 116.522 114.949 32.945 1.00 77.58 N
ATOM 15 C8 A B2090 117.833 115.357 32.916 1.00 77.51 C
ATOM 16 N7 A B2090 118.466 115.184 34.050 1.00 78.57 N
ATOM 17 C5 A B2090 117.506 114.639 34.891 1.00 79.05 C
ATOM 18 C6 A B2090 117.549 114.211 36.238 1.00 78.92 C
ATOM 19 N6 A B2090 118.646 114.253 37.002 1.00 79.36 N
ATOM 20 N1 A B2090 116.414 113.730 36.777 1.00 77.75 N
ATOM 21 C2 A B2090 115.317 113.678 36.016 1.00 78.35 C
ATOM 22 N3 A B2090 115.151 114.036 34.744 1.00 78.80 N
ATOM 23 C4 A B2090 116.297 114.511 34.230 1.00 78.41 C
ATOM 24 P C B2091 113.071 119.181 31.870 1.00 77.07 P
ATOM 25 OP1 C B2091 111.700 119.554 31.428 1.00 75.51 O
ATOM 26 OP2 C B2091 114.195 120.137 31.658 1.00 76.33 O
ATOM 27 O5' C B2091 113.041 118.820 33.422 1.00 74.17 O
TER
Atoms:
C2: (116.507,117.255,36.945)
OP1: (111.700,119.554,31.428)
OP2: (114.195,120.137,31.658)
C4: (117.879,118.183,35.306)
O5': (113.041,118.820,33.422)
C3': (112.666,119.111,36.323)
C1': (114.045,117.234,36.667)
O4': (113.202,116.953,35.560)
C5': (111.869,118.253,34.036)
P: (113.071,119.181,31.870)
O2: (116.340,116.693,38.044)
C4': (112.145,117.947,35.488)
C2': (113.420,118.399,37.437)
O2': (112.579,117.900,38.455)
N1: (115.386,117.568,36.158)
N3: (117.740,117.576,36.489)
N4: (119.114,118.482,34.900)
C6: (115.545,118.184,34.943)
C5: (116.757,118.509,34.486)
O3': (111.629,119.960,36.811)
OP1: (111.700,119.554,31.428)
OP2: (114.195,120.137,31.658)
C4: (117.879,118.183,35.306)
O5': (113.041,118.820,33.422)
C3': (112.666,119.111,36.323)
C1': (114.045,117.234,36.667)
O4': (113.202,116.953,35.560)
C5': (111.869,118.253,34.036)
P: (113.071,119.181,31.870)
O2: (116.340,116.693,38.044)
C4': (112.145,117.947,35.488)
C2': (113.420,118.399,37.437)
O2': (112.579,117.900,38.455)
N1: (115.386,117.568,36.158)
N3: (117.740,117.576,36.489)
N4: (119.114,118.482,34.900)
C6: (115.545,118.184,34.943)
C5: (116.757,118.509,34.486)
O3': (111.629,119.960,36.811)
OP1: (118.847,119.529,29.687)
OP2: (119.534,118.604,31.994)
C3': (114.577,117.054,31.528)
C1': (115.571,114.938,31.830)
C5': (116.385,117.807,29.888)
O4': (116.188,115.555,30.713)
C8: (117.833,115.357,32.916)
O2': (113.247,115.003,31.354)
C6: (117.549,114.211,36.238)
C5: (117.506,114.639,34.891)
C4: (116.297,114.511,34.230)
P: (118.812,118.445,30.704)
C4': (115.425,116.722,30.312)
C2': (114.255,115.673,32.084)
C2: (115.317,113.678,36.016)
N1: (116.414,113.730,36.777)
N3: (115.151,114.036,34.744)
N6: (118.646,114.253,37.002)
N7: (118.466,115.184,34.050)
N9: (116.522,114.949,32.945)
O5': (117.276,118.130,30.977)
O3': (113.413,117.782,31.148)
OP2: (119.534,118.604,31.994)
C3': (114.577,117.054,31.528)
C1': (115.571,114.938,31.830)
C5': (116.385,117.807,29.888)
O4': (116.188,115.555,30.713)
C8: (117.833,115.357,32.916)
O2': (113.247,115.003,31.354)
C6: (117.549,114.211,36.238)
C5: (117.506,114.639,34.891)
C4: (116.297,114.511,34.230)
P: (118.812,118.445,30.704)
C4': (115.425,116.722,30.312)
C2': (114.255,115.673,32.084)
C2: (115.317,113.678,36.016)
N1: (116.414,113.730,36.777)
N3: (115.151,114.036,34.744)
N6: (118.646,114.253,37.002)
N7: (118.466,115.184,34.050)
N9: (116.522,114.949,32.945)
O5': (117.276,118.130,30.977)
O3': (113.413,117.782,31.148)
Image (generated by PyMOL):