Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0232:0231
Extra
PDB:
ATOM 1 O3' A A 231 93.455 103.752 -1.437 1.00 46.50 O
ATOM 2 P C A 232 94.245 104.763 -2.411 1.00 49.66 P
ATOM 3 OP1 C A 232 95.468 104.061 -2.878 1.00 47.29 O
ATOM 4 OP2 C A 232 94.371 106.087 -1.750 1.00 50.48 O
ATOM 5 O5' C A 232 93.255 104.954 -3.637 1.00 48.11 O
ATOM 6 C5' C A 232 92.812 103.833 -4.419 1.00 47.22 C
ATOM 7 C4' C A 232 91.734 104.282 -5.369 1.00 45.67 C
ATOM 8 O4' C A 232 90.496 104.524 -4.642 1.00 42.96 O
ATOM 9 C3' C A 232 92.058 105.611 -6.024 1.00 44.65 C
ATOM 10 O3' C A 232 92.952 105.456 -7.121 1.00 45.56 O
ATOM 11 C2' C A 232 90.675 106.150 -6.362 1.00 43.98 C
ATOM 12 O2' C A 232 90.116 105.563 -7.519 1.00 43.60 O
ATOM 13 C1' C A 232 89.883 105.709 -5.125 1.00 42.44 C
ATOM 14 N1 C A 232 89.907 106.710 -4.037 1.00 41.11 N
ATOM 15 C2 C A 232 88.858 107.633 -3.934 1.00 39.89 C
ATOM 16 O2 C A 232 87.924 107.579 -4.743 1.00 39.49 O
ATOM 17 N3 C A 232 88.889 108.557 -2.950 1.00 39.52 N
ATOM 18 C4 C A 232 89.906 108.582 -2.086 1.00 38.22 C
ATOM 19 N4 C A 232 89.893 109.517 -1.133 1.00 39.15 N
ATOM 20 C5 C A 232 90.980 107.652 -2.160 1.00 37.00 C
ATOM 21 C6 C A 232 90.943 106.744 -3.139 1.00 39.95 C
ATOM 22 P C A 233 93.835 106.709 -7.612 1.00 46.70 P
ATOM 23 OP1 C A 233 94.477 106.276 -8.881 1.00 47.29 O
ATOM 24 OP2 C A 233 94.682 107.236 -6.513 1.00 43.57 O
ATOM 25 O5' C A 233 92.713 107.784 -7.941 1.00 42.42 O
TER
ATOM 1 O3' A B 230 92.589 107.486 3.382 1.00 39.43 O
ATOM 2 P A B 231 92.820 107.887 1.839 1.00 40.40 P
ATOM 3 OP1 A B 231 94.263 108.221 1.713 1.00 36.71 O
ATOM 4 OP2 A B 231 91.793 108.893 1.428 1.00 37.44 O
ATOM 5 O5' A B 231 92.524 106.529 1.053 1.00 38.59 O
ATOM 6 C5' A B 231 93.229 105.313 1.374 1.00 39.41 C
ATOM 7 C4' A B 231 92.525 104.122 0.761 1.00 42.37 C
ATOM 8 O4' A B 231 91.194 103.996 1.328 1.00 41.99 O
ATOM 9 C3' A B 231 92.293 104.196 -0.741 1.00 43.23 C
ATOM 10 O3' A B 231 93.455 103.752 -1.437 1.00 46.50 O
ATOM 11 C2' A B 231 91.109 103.251 -0.939 1.00 42.45 C
ATOM 12 O2' A B 231 91.492 101.892 -1.010 1.00 42.94 O
ATOM 13 C1' A B 231 90.307 103.483 0.349 1.00 39.99 C
ATOM 14 N9 A B 231 89.197 104.420 0.195 1.00 37.67 N
ATOM 15 C8 A B 231 89.253 105.781 0.017 1.00 36.94 C
ATOM 16 N7 A B 231 88.077 106.341 -0.145 1.00 35.64 N
ATOM 17 C5 A B 231 87.189 105.281 -0.058 1.00 35.42 C
ATOM 18 C6 A B 231 85.795 105.210 -0.166 1.00 36.17 C
ATOM 19 N6 A B 231 85.018 106.270 -0.412 1.00 36.95 N
ATOM 20 N1 A B 231 85.214 103.997 -0.018 1.00 36.22 N
ATOM 21 C2 A B 231 85.994 102.937 0.213 1.00 35.78 C
ATOM 22 N3 A B 231 87.317 102.875 0.323 1.00 35.60 N
ATOM 23 C4 A B 231 87.862 104.094 0.173 1.00 36.30 C
ATOM 24 P C B 232 94.245 104.763 -2.411 1.00 49.66 P
ATOM 25 OP1 C B 232 95.468 104.061 -2.878 1.00 47.29 O
ATOM 26 OP2 C B 232 94.371 106.087 -1.750 1.00 50.48 O
ATOM 27 O5' C B 232 93.255 104.954 -3.637 1.00 48.11 O
TER
ATOM 2 P C A 232 94.245 104.763 -2.411 1.00 49.66 P
ATOM 3 OP1 C A 232 95.468 104.061 -2.878 1.00 47.29 O
ATOM 4 OP2 C A 232 94.371 106.087 -1.750 1.00 50.48 O
ATOM 5 O5' C A 232 93.255 104.954 -3.637 1.00 48.11 O
ATOM 6 C5' C A 232 92.812 103.833 -4.419 1.00 47.22 C
ATOM 7 C4' C A 232 91.734 104.282 -5.369 1.00 45.67 C
ATOM 8 O4' C A 232 90.496 104.524 -4.642 1.00 42.96 O
ATOM 9 C3' C A 232 92.058 105.611 -6.024 1.00 44.65 C
ATOM 10 O3' C A 232 92.952 105.456 -7.121 1.00 45.56 O
ATOM 11 C2' C A 232 90.675 106.150 -6.362 1.00 43.98 C
ATOM 12 O2' C A 232 90.116 105.563 -7.519 1.00 43.60 O
ATOM 13 C1' C A 232 89.883 105.709 -5.125 1.00 42.44 C
ATOM 14 N1 C A 232 89.907 106.710 -4.037 1.00 41.11 N
ATOM 15 C2 C A 232 88.858 107.633 -3.934 1.00 39.89 C
ATOM 16 O2 C A 232 87.924 107.579 -4.743 1.00 39.49 O
ATOM 17 N3 C A 232 88.889 108.557 -2.950 1.00 39.52 N
ATOM 18 C4 C A 232 89.906 108.582 -2.086 1.00 38.22 C
ATOM 19 N4 C A 232 89.893 109.517 -1.133 1.00 39.15 N
ATOM 20 C5 C A 232 90.980 107.652 -2.160 1.00 37.00 C
ATOM 21 C6 C A 232 90.943 106.744 -3.139 1.00 39.95 C
ATOM 22 P C A 233 93.835 106.709 -7.612 1.00 46.70 P
ATOM 23 OP1 C A 233 94.477 106.276 -8.881 1.00 47.29 O
ATOM 24 OP2 C A 233 94.682 107.236 -6.513 1.00 43.57 O
ATOM 25 O5' C A 233 92.713 107.784 -7.941 1.00 42.42 O
TER
ATOM 1 O3' A B 230 92.589 107.486 3.382 1.00 39.43 O
ATOM 2 P A B 231 92.820 107.887 1.839 1.00 40.40 P
ATOM 3 OP1 A B 231 94.263 108.221 1.713 1.00 36.71 O
ATOM 4 OP2 A B 231 91.793 108.893 1.428 1.00 37.44 O
ATOM 5 O5' A B 231 92.524 106.529 1.053 1.00 38.59 O
ATOM 6 C5' A B 231 93.229 105.313 1.374 1.00 39.41 C
ATOM 7 C4' A B 231 92.525 104.122 0.761 1.00 42.37 C
ATOM 8 O4' A B 231 91.194 103.996 1.328 1.00 41.99 O
ATOM 9 C3' A B 231 92.293 104.196 -0.741 1.00 43.23 C
ATOM 10 O3' A B 231 93.455 103.752 -1.437 1.00 46.50 O
ATOM 11 C2' A B 231 91.109 103.251 -0.939 1.00 42.45 C
ATOM 12 O2' A B 231 91.492 101.892 -1.010 1.00 42.94 O
ATOM 13 C1' A B 231 90.307 103.483 0.349 1.00 39.99 C
ATOM 14 N9 A B 231 89.197 104.420 0.195 1.00 37.67 N
ATOM 15 C8 A B 231 89.253 105.781 0.017 1.00 36.94 C
ATOM 16 N7 A B 231 88.077 106.341 -0.145 1.00 35.64 N
ATOM 17 C5 A B 231 87.189 105.281 -0.058 1.00 35.42 C
ATOM 18 C6 A B 231 85.795 105.210 -0.166 1.00 36.17 C
ATOM 19 N6 A B 231 85.018 106.270 -0.412 1.00 36.95 N
ATOM 20 N1 A B 231 85.214 103.997 -0.018 1.00 36.22 N
ATOM 21 C2 A B 231 85.994 102.937 0.213 1.00 35.78 C
ATOM 22 N3 A B 231 87.317 102.875 0.323 1.00 35.60 N
ATOM 23 C4 A B 231 87.862 104.094 0.173 1.00 36.30 C
ATOM 24 P C B 232 94.245 104.763 -2.411 1.00 49.66 P
ATOM 25 OP1 C B 232 95.468 104.061 -2.878 1.00 47.29 O
ATOM 26 OP2 C B 232 94.371 106.087 -1.750 1.00 50.48 O
ATOM 27 O5' C B 232 93.255 104.954 -3.637 1.00 48.11 O
TER
Atoms:
C2: (88.858,107.633,-3.934)
OP1: (95.468,104.061,-2.878)
OP2: (94.371,106.087,-1.750)
C4: (89.906,108.582,-2.086)
O5': (93.255,104.954,-3.637)
C3': (92.058,105.611,-6.024)
C1': (89.883,105.709,-5.125)
O4': (90.496,104.524,-4.642)
C5': (92.812,103.833,-4.419)
P: (94.245,104.763,-2.411)
O2: (87.924,107.579,-4.743)
C4': (91.734,104.282,-5.369)
C2': (90.675,106.150,-6.362)
O2': (90.116,105.563,-7.519)
N1: (89.907,106.710,-4.037)
N3: (88.889,108.557,-2.950)
N4: (89.893,109.517,-1.133)
C6: (90.943,106.744,-3.139)
C5: (90.980,107.652,-2.160)
O3': (92.952,105.456,-7.121)
OP1: (95.468,104.061,-2.878)
OP2: (94.371,106.087,-1.750)
C4: (89.906,108.582,-2.086)
O5': (93.255,104.954,-3.637)
C3': (92.058,105.611,-6.024)
C1': (89.883,105.709,-5.125)
O4': (90.496,104.524,-4.642)
C5': (92.812,103.833,-4.419)
P: (94.245,104.763,-2.411)
O2: (87.924,107.579,-4.743)
C4': (91.734,104.282,-5.369)
C2': (90.675,106.150,-6.362)
O2': (90.116,105.563,-7.519)
N1: (89.907,106.710,-4.037)
N3: (88.889,108.557,-2.950)
N4: (89.893,109.517,-1.133)
C6: (90.943,106.744,-3.139)
C5: (90.980,107.652,-2.160)
O3': (92.952,105.456,-7.121)
OP1: (94.263,108.221,1.713)
OP2: (91.793,108.893,1.428)
C3': (92.293,104.196,-0.741)
C1': (90.307,103.483,0.349)
C5': (93.229,105.313,1.374)
O4': (91.194,103.996,1.328)
C8: (89.253,105.781,0.017)
O2': (91.492,101.892,-1.010)
C6: (85.795,105.210,-0.166)
C5: (87.189,105.281,-0.058)
C4: (87.862,104.094,0.173)
P: (92.820,107.887,1.839)
C4': (92.525,104.122,0.761)
C2': (91.109,103.251,-0.939)
C2: (85.994,102.937,0.213)
N1: (85.214,103.997,-0.018)
N3: (87.317,102.875,0.323)
N6: (85.018,106.270,-0.412)
N7: (88.077,106.341,-0.145)
N9: (89.197,104.420,0.195)
O5': (92.524,106.529,1.053)
O3': (93.455,103.752,-1.437)
OP2: (91.793,108.893,1.428)
C3': (92.293,104.196,-0.741)
C1': (90.307,103.483,0.349)
C5': (93.229,105.313,1.374)
O4': (91.194,103.996,1.328)
C8: (89.253,105.781,0.017)
O2': (91.492,101.892,-1.010)
C6: (85.795,105.210,-0.166)
C5: (87.189,105.281,-0.058)
C4: (87.862,104.094,0.173)
P: (92.820,107.887,1.839)
C4': (92.525,104.122,0.761)
C2': (91.109,103.251,-0.939)
C2: (85.994,102.937,0.213)
N1: (85.214,103.997,-0.018)
N3: (87.317,102.875,0.323)
N6: (85.018,106.270,-0.412)
N7: (88.077,106.341,-0.145)
N9: (89.197,104.420,0.195)
O5': (92.524,106.529,1.053)
O3': (93.455,103.752,-1.437)
Image (generated by PyMOL):