Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A556:A555
Extra
PDB:
ATOM 1 O3' A A 555 -69.493-105.503 -10.264 1.00 0.01 O
ATOM 2 P C A 556 -70.844-104.860 -10.743 1.00 0.01 P
ATOM 3 OP1 C A 556 -70.593-104.212 -12.050 1.00 0.01 O
ATOM 4 OP2 C A 556 -71.352-104.060 -9.652 1.00 0.01 O
ATOM 5 O5' C A 556 -71.753-106.104 -10.939 1.00 0.01 O
ATOM 6 C5' C A 556 -72.583-106.185 -12.065 1.00 0.01 C
ATOM 7 C4' C A 556 -73.775-107.000 -11.768 1.00 0.01 C
ATOM 8 O4' C A 556 -73.402-108.039 -10.846 1.00 0.01 O
ATOM 9 C3' C A 556 -74.883-106.274 -11.073 1.00 0.01 C
ATOM 10 O3' C A 556 -75.667-105.551 -11.976 1.00 0.01 O
ATOM 11 C2' C A 556 -75.620-107.405 -10.430 1.00 0.01 C
ATOM 12 O2' C A 556 -76.389-108.074 -11.403 1.00 0.01 O
ATOM 13 C1' C A 556 -74.463-108.315 -10.000 1.00 0.01 C
ATOM 14 N1 C A 556 -74.036-108.030 -8.655 1.00 0.01 N
ATOM 15 C2 C A 556 -74.857-108.413 -7.638 1.00 0.01 C
ATOM 16 O2 C A 556 -75.869-109.015 -7.925 1.00 0.01 O
ATOM 17 N3 C A 556 -74.546-108.131 -6.370 1.00 0.01 N
ATOM 18 C4 C A 556 -73.443-107.462 -6.086 1.00 0.01 C
ATOM 19 N4 C A 556 -73.200-107.214 -4.802 1.00 0.01 N
ATOM 20 C5 C A 556 -72.565-107.045 -7.117 1.00 0.01 C
ATOM 21 C6 C A 556 -72.904-107.346 -8.387 1.00 0.01 C
ATOM 22 P U A 557 -76.331-104.165 -11.568 1.00 0.01 P
ATOM 23 OP1 U A 557 -76.836-103.563 -12.806 1.00 0.01 O
ATOM 24 OP2 U A 557 -75.368-103.433 -10.761 1.00 0.01 O
ATOM 25 O5' U A 557 -77.529-104.612 -10.666 1.00 0.01 O
TER
ATOM 1 O3' G B 554 -68.058-106.927 -4.889 1.00 0.01 O
ATOM 2 P A B 555 -68.950-105.734 -5.426 1.00 0.01 P
ATOM 3 OP1 A B 555 -68.233-104.495 -5.176 1.00 0.01 O
ATOM 4 OP2 A B 555 -70.274-105.897 -4.855 1.00 0.01 O
ATOM 5 O5' A B 555 -68.989-106.016 -6.980 1.00 0.01 O
ATOM 6 C5' A B 555 -67.811-106.364 -7.685 1.00 0.01 C
ATOM 7 C4' A B 555 -68.142-107.019 -8.992 1.00 0.01 C
ATOM 8 O4' A B 555 -68.130-108.452 -8.843 1.00 0.01 O
ATOM 9 C3' A B 555 -69.505-106.699 -9.541 1.00 0.01 C
ATOM 10 O3' A B 555 -69.493-105.503 -10.264 1.00 0.01 O
ATOM 11 C2' A B 555 -69.827-107.920 -10.376 1.00 0.01 C
ATOM 12 O2' A B 555 -69.172-107.861 -11.623 1.00 0.01 O
ATOM 13 C1' A B 555 -69.192-109.023 -9.544 1.00 0.01 C
ATOM 14 N9 A B 555 -70.129-109.557 -8.549 1.00 0.04 N
ATOM 15 C8 A B 555 -70.189-109.190 -7.234 1.00 0.04 C
ATOM 16 N7 A B 555 -71.140-109.796 -6.583 1.00 0.04 N
ATOM 17 C5 A B 555 -71.740-110.624 -7.528 1.00 0.04 C
ATOM 18 C6 A B 555 -72.805-111.542 -7.481 1.00 0.04 C
ATOM 19 N6 A B 555 -73.525-111.813 -6.408 1.00 0.04 N
ATOM 20 N1 A B 555 -73.138-112.195 -8.594 1.00 0.04 N
ATOM 21 C2 A B 555 -72.443-111.949 -9.697 1.00 0.04 C
ATOM 22 N3 A B 555 -71.433-111.119 -9.878 1.00 0.04 N
ATOM 23 C4 A B 555 -71.121-110.482 -8.744 1.00 0.04 C
ATOM 24 P C B 556 -70.844-104.860 -10.743 1.00 0.01 P
ATOM 25 OP1 C B 556 -70.593-104.212 -12.050 1.00 0.01 O
ATOM 26 OP2 C B 556 -71.352-104.060 -9.652 1.00 0.01 O
ATOM 27 O5' C B 556 -71.753-106.104 -10.939 1.00 0.01 O
TER
ATOM 2 P C A 556 -70.844-104.860 -10.743 1.00 0.01 P
ATOM 3 OP1 C A 556 -70.593-104.212 -12.050 1.00 0.01 O
ATOM 4 OP2 C A 556 -71.352-104.060 -9.652 1.00 0.01 O
ATOM 5 O5' C A 556 -71.753-106.104 -10.939 1.00 0.01 O
ATOM 6 C5' C A 556 -72.583-106.185 -12.065 1.00 0.01 C
ATOM 7 C4' C A 556 -73.775-107.000 -11.768 1.00 0.01 C
ATOM 8 O4' C A 556 -73.402-108.039 -10.846 1.00 0.01 O
ATOM 9 C3' C A 556 -74.883-106.274 -11.073 1.00 0.01 C
ATOM 10 O3' C A 556 -75.667-105.551 -11.976 1.00 0.01 O
ATOM 11 C2' C A 556 -75.620-107.405 -10.430 1.00 0.01 C
ATOM 12 O2' C A 556 -76.389-108.074 -11.403 1.00 0.01 O
ATOM 13 C1' C A 556 -74.463-108.315 -10.000 1.00 0.01 C
ATOM 14 N1 C A 556 -74.036-108.030 -8.655 1.00 0.01 N
ATOM 15 C2 C A 556 -74.857-108.413 -7.638 1.00 0.01 C
ATOM 16 O2 C A 556 -75.869-109.015 -7.925 1.00 0.01 O
ATOM 17 N3 C A 556 -74.546-108.131 -6.370 1.00 0.01 N
ATOM 18 C4 C A 556 -73.443-107.462 -6.086 1.00 0.01 C
ATOM 19 N4 C A 556 -73.200-107.214 -4.802 1.00 0.01 N
ATOM 20 C5 C A 556 -72.565-107.045 -7.117 1.00 0.01 C
ATOM 21 C6 C A 556 -72.904-107.346 -8.387 1.00 0.01 C
ATOM 22 P U A 557 -76.331-104.165 -11.568 1.00 0.01 P
ATOM 23 OP1 U A 557 -76.836-103.563 -12.806 1.00 0.01 O
ATOM 24 OP2 U A 557 -75.368-103.433 -10.761 1.00 0.01 O
ATOM 25 O5' U A 557 -77.529-104.612 -10.666 1.00 0.01 O
TER
ATOM 1 O3' G B 554 -68.058-106.927 -4.889 1.00 0.01 O
ATOM 2 P A B 555 -68.950-105.734 -5.426 1.00 0.01 P
ATOM 3 OP1 A B 555 -68.233-104.495 -5.176 1.00 0.01 O
ATOM 4 OP2 A B 555 -70.274-105.897 -4.855 1.00 0.01 O
ATOM 5 O5' A B 555 -68.989-106.016 -6.980 1.00 0.01 O
ATOM 6 C5' A B 555 -67.811-106.364 -7.685 1.00 0.01 C
ATOM 7 C4' A B 555 -68.142-107.019 -8.992 1.00 0.01 C
ATOM 8 O4' A B 555 -68.130-108.452 -8.843 1.00 0.01 O
ATOM 9 C3' A B 555 -69.505-106.699 -9.541 1.00 0.01 C
ATOM 10 O3' A B 555 -69.493-105.503 -10.264 1.00 0.01 O
ATOM 11 C2' A B 555 -69.827-107.920 -10.376 1.00 0.01 C
ATOM 12 O2' A B 555 -69.172-107.861 -11.623 1.00 0.01 O
ATOM 13 C1' A B 555 -69.192-109.023 -9.544 1.00 0.01 C
ATOM 14 N9 A B 555 -70.129-109.557 -8.549 1.00 0.04 N
ATOM 15 C8 A B 555 -70.189-109.190 -7.234 1.00 0.04 C
ATOM 16 N7 A B 555 -71.140-109.796 -6.583 1.00 0.04 N
ATOM 17 C5 A B 555 -71.740-110.624 -7.528 1.00 0.04 C
ATOM 18 C6 A B 555 -72.805-111.542 -7.481 1.00 0.04 C
ATOM 19 N6 A B 555 -73.525-111.813 -6.408 1.00 0.04 N
ATOM 20 N1 A B 555 -73.138-112.195 -8.594 1.00 0.04 N
ATOM 21 C2 A B 555 -72.443-111.949 -9.697 1.00 0.04 C
ATOM 22 N3 A B 555 -71.433-111.119 -9.878 1.00 0.04 N
ATOM 23 C4 A B 555 -71.121-110.482 -8.744 1.00 0.04 C
ATOM 24 P C B 556 -70.844-104.860 -10.743 1.00 0.01 P
ATOM 25 OP1 C B 556 -70.593-104.212 -12.050 1.00 0.01 O
ATOM 26 OP2 C B 556 -71.352-104.060 -9.652 1.00 0.01 O
ATOM 27 O5' C B 556 -71.753-106.104 -10.939 1.00 0.01 O
TER
Atoms:
C2: (-74.857,-108.413,-7.638)
OP1: (-70.593,-104.212,-12.050)
OP2: (-71.352,-104.060,-9.652)
C4: (-73.443,-107.462,-6.086)
O5': (-71.753,-106.104,-10.939)
C3': (-74.883,-106.274,-11.073)
C1': (-74.463,-108.315,-10.000)
O4': (-73.402,-108.039,-10.846)
C5': (-72.583,-106.185,-12.065)
P: (-70.844,-104.860,-10.743)
O2: (-75.869,-109.015,-7.925)
C4': (-73.775,-107.000,-11.768)
C2': (-75.620,-107.405,-10.430)
O2': (-76.389,-108.074,-11.403)
N1: (-74.036,-108.030,-8.655)
N3: (-74.546,-108.131,-6.370)
N4: (-73.200,-107.214,-4.802)
C6: (-72.904,-107.346,-8.387)
C5: (-72.565,-107.045,-7.117)
O3': (-75.667,-105.551,-11.976)
OP1: (-70.593,-104.212,-12.050)
OP2: (-71.352,-104.060,-9.652)
C4: (-73.443,-107.462,-6.086)
O5': (-71.753,-106.104,-10.939)
C3': (-74.883,-106.274,-11.073)
C1': (-74.463,-108.315,-10.000)
O4': (-73.402,-108.039,-10.846)
C5': (-72.583,-106.185,-12.065)
P: (-70.844,-104.860,-10.743)
O2: (-75.869,-109.015,-7.925)
C4': (-73.775,-107.000,-11.768)
C2': (-75.620,-107.405,-10.430)
O2': (-76.389,-108.074,-11.403)
N1: (-74.036,-108.030,-8.655)
N3: (-74.546,-108.131,-6.370)
N4: (-73.200,-107.214,-4.802)
C6: (-72.904,-107.346,-8.387)
C5: (-72.565,-107.045,-7.117)
O3': (-75.667,-105.551,-11.976)
OP1: (-68.233,-104.495,-5.176)
OP2: (-70.274,-105.897,-4.855)
C3': (-69.505,-106.699,-9.541)
C1': (-69.192,-109.023,-9.544)
C5': (-67.811,-106.364,-7.685)
O4': (-68.130,-108.452,-8.843)
C8: (-70.189,-109.190,-7.234)
O2': (-69.172,-107.861,-11.623)
C6: (-72.805,-111.542,-7.481)
C5: (-71.740,-110.624,-7.528)
C4: (-71.121,-110.482,-8.744)
P: (-68.950,-105.734,-5.426)
C4': (-68.142,-107.019,-8.992)
C2': (-69.827,-107.920,-10.376)
C2: (-72.443,-111.949,-9.697)
N1: (-73.138,-112.195,-8.594)
N3: (-71.433,-111.119,-9.878)
N6: (-73.525,-111.813,-6.408)
N7: (-71.140,-109.796,-6.583)
N9: (-70.129,-109.557,-8.549)
O5': (-68.989,-106.016,-6.980)
O3': (-69.493,-105.503,-10.264)
OP2: (-70.274,-105.897,-4.855)
C3': (-69.505,-106.699,-9.541)
C1': (-69.192,-109.023,-9.544)
C5': (-67.811,-106.364,-7.685)
O4': (-68.130,-108.452,-8.843)
C8: (-70.189,-109.190,-7.234)
O2': (-69.172,-107.861,-11.623)
C6: (-72.805,-111.542,-7.481)
C5: (-71.740,-110.624,-7.528)
C4: (-71.121,-110.482,-8.744)
P: (-68.950,-105.734,-5.426)
C4': (-68.142,-107.019,-8.992)
C2': (-69.827,-107.920,-10.376)
C2: (-72.443,-111.949,-9.697)
N1: (-73.138,-112.195,-8.594)
N3: (-71.433,-111.119,-9.878)
N6: (-73.525,-111.813,-6.408)
N7: (-71.140,-109.796,-6.583)
N9: (-70.129,-109.557,-8.549)
O5': (-68.989,-106.016,-6.980)
O3': (-69.493,-105.503,-10.264)
Image (generated by PyMOL):