Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A129:A128
Extra
PDB:
ATOM 1 O3' A A 128 26.684 39.821 25.029 1.00 43.96 O
ATOM 2 P C A 129 27.038 38.481 24.228 1.00 43.99 P
ATOM 3 OP1 C A 129 27.940 37.706 25.108 1.00 43.95 O
ATOM 4 OP2 C A 129 27.488 38.815 22.859 1.00 44.33 O
ATOM 5 O5' C A 129 25.640 37.721 24.068 1.00 43.82 O
ATOM 6 C5' C A 129 25.036 37.043 25.175 1.00 43.76 C
ATOM 7 C4' C A 129 23.654 36.508 24.845 1.00 42.85 C
ATOM 8 O4' C A 129 22.762 37.611 24.558 1.00 43.50 O
ATOM 9 C3' C A 129 23.603 35.669 23.585 1.00 42.55 C
ATOM 10 O3' C A 129 23.868 34.320 23.875 1.00 41.99 O
ATOM 11 C2' C A 129 22.186 35.909 23.056 1.00 43.12 C
ATOM 12 O2' C A 129 21.146 35.167 23.671 1.00 43.24 O
ATOM 13 C1' C A 129 22.037 37.387 23.356 1.00 43.16 C
ATOM 14 N1 C A 129 22.529 38.231 22.207 1.00 43.29 N
ATOM 15 C2 C A 129 21.745 38.312 21.047 1.00 43.98 C
ATOM 16 O2 C A 129 20.674 37.695 21.000 1.00 44.41 O
ATOM 17 N3 C A 129 22.180 39.069 20.002 1.00 44.37 N
ATOM 18 C4 C A 129 23.348 39.714 20.085 1.00 44.13 C
ATOM 19 N4 C A 129 23.739 40.441 19.037 1.00 44.16 N
ATOM 20 C5 C A 129 24.167 39.643 21.251 1.00 43.63 C
ATOM 21 C6 C A 129 23.720 38.900 22.268 1.00 43.14 C
ATOM 22 P C A 130 24.625 33.451 22.778 1.00 40.66 P
ATOM 23 OP1 C A 130 25.047 32.184 23.421 1.00 40.21 O
ATOM 24 OP2 C A 130 25.615 34.330 22.117 1.00 40.63 O
ATOM 25 O5' C A 130 23.478 33.149 21.707 1.00 40.75 O
TER
ATOM 1 O3' U B 127 27.120 44.262 20.511 1.00 45.94 O
ATOM 2 P A B 128 26.697 42.724 20.367 1.00 45.35 P
ATOM 3 OP1 A B 128 27.929 41.954 20.098 1.00 45.32 O
ATOM 4 OP2 A B 128 25.555 42.634 19.432 1.00 45.54 O
ATOM 5 O5' A B 128 26.180 42.340 21.821 1.00 45.51 O
ATOM 6 C5' A B 128 27.103 42.171 22.893 1.00 45.61 C
ATOM 7 C4' A B 128 26.381 42.091 24.225 1.00 45.55 C
ATOM 8 O4' A B 128 25.265 43.020 24.260 1.00 45.66 O
ATOM 9 C3' A B 128 25.744 40.739 24.504 1.00 45.53 C
ATOM 10 O3' A B 128 26.684 39.821 25.029 1.00 43.96 O
ATOM 11 C2' A B 128 24.654 41.120 25.500 1.00 46.54 C
ATOM 12 O2' A B 128 25.141 41.428 26.792 1.00 48.16 O
ATOM 13 C1' A B 128 24.127 42.387 24.833 1.00 46.53 C
ATOM 14 N9 A B 128 23.109 42.134 23.804 1.00 46.72 N
ATOM 15 C8 A B 128 23.140 42.565 22.508 1.00 47.07 C
ATOM 16 N7 A B 128 22.104 42.204 21.790 1.00 47.35 N
ATOM 17 C5 A B 128 21.327 41.478 22.671 1.00 46.89 C
ATOM 18 C6 A B 128 20.087 40.815 22.514 1.00 46.78 C
ATOM 19 N6 A B 128 19.391 40.792 21.366 1.00 46.29 N
ATOM 20 N1 A B 128 19.582 40.183 23.600 1.00 46.17 N
ATOM 21 C2 A B 128 20.269 40.215 24.749 1.00 46.07 C
ATOM 22 N3 A B 128 21.439 40.801 25.015 1.00 46.35 N
ATOM 23 C4 A B 128 21.927 41.423 23.923 1.00 46.73 C
ATOM 24 P C B 129 27.038 38.481 24.228 1.00 43.99 P
ATOM 25 OP1 C B 129 27.940 37.706 25.108 1.00 43.95 O
ATOM 26 OP2 C B 129 27.488 38.815 22.859 1.00 44.33 O
ATOM 27 O5' C B 129 25.640 37.721 24.068 1.00 43.82 O
TER
ATOM 2 P C A 129 27.038 38.481 24.228 1.00 43.99 P
ATOM 3 OP1 C A 129 27.940 37.706 25.108 1.00 43.95 O
ATOM 4 OP2 C A 129 27.488 38.815 22.859 1.00 44.33 O
ATOM 5 O5' C A 129 25.640 37.721 24.068 1.00 43.82 O
ATOM 6 C5' C A 129 25.036 37.043 25.175 1.00 43.76 C
ATOM 7 C4' C A 129 23.654 36.508 24.845 1.00 42.85 C
ATOM 8 O4' C A 129 22.762 37.611 24.558 1.00 43.50 O
ATOM 9 C3' C A 129 23.603 35.669 23.585 1.00 42.55 C
ATOM 10 O3' C A 129 23.868 34.320 23.875 1.00 41.99 O
ATOM 11 C2' C A 129 22.186 35.909 23.056 1.00 43.12 C
ATOM 12 O2' C A 129 21.146 35.167 23.671 1.00 43.24 O
ATOM 13 C1' C A 129 22.037 37.387 23.356 1.00 43.16 C
ATOM 14 N1 C A 129 22.529 38.231 22.207 1.00 43.29 N
ATOM 15 C2 C A 129 21.745 38.312 21.047 1.00 43.98 C
ATOM 16 O2 C A 129 20.674 37.695 21.000 1.00 44.41 O
ATOM 17 N3 C A 129 22.180 39.069 20.002 1.00 44.37 N
ATOM 18 C4 C A 129 23.348 39.714 20.085 1.00 44.13 C
ATOM 19 N4 C A 129 23.739 40.441 19.037 1.00 44.16 N
ATOM 20 C5 C A 129 24.167 39.643 21.251 1.00 43.63 C
ATOM 21 C6 C A 129 23.720 38.900 22.268 1.00 43.14 C
ATOM 22 P C A 130 24.625 33.451 22.778 1.00 40.66 P
ATOM 23 OP1 C A 130 25.047 32.184 23.421 1.00 40.21 O
ATOM 24 OP2 C A 130 25.615 34.330 22.117 1.00 40.63 O
ATOM 25 O5' C A 130 23.478 33.149 21.707 1.00 40.75 O
TER
ATOM 1 O3' U B 127 27.120 44.262 20.511 1.00 45.94 O
ATOM 2 P A B 128 26.697 42.724 20.367 1.00 45.35 P
ATOM 3 OP1 A B 128 27.929 41.954 20.098 1.00 45.32 O
ATOM 4 OP2 A B 128 25.555 42.634 19.432 1.00 45.54 O
ATOM 5 O5' A B 128 26.180 42.340 21.821 1.00 45.51 O
ATOM 6 C5' A B 128 27.103 42.171 22.893 1.00 45.61 C
ATOM 7 C4' A B 128 26.381 42.091 24.225 1.00 45.55 C
ATOM 8 O4' A B 128 25.265 43.020 24.260 1.00 45.66 O
ATOM 9 C3' A B 128 25.744 40.739 24.504 1.00 45.53 C
ATOM 10 O3' A B 128 26.684 39.821 25.029 1.00 43.96 O
ATOM 11 C2' A B 128 24.654 41.120 25.500 1.00 46.54 C
ATOM 12 O2' A B 128 25.141 41.428 26.792 1.00 48.16 O
ATOM 13 C1' A B 128 24.127 42.387 24.833 1.00 46.53 C
ATOM 14 N9 A B 128 23.109 42.134 23.804 1.00 46.72 N
ATOM 15 C8 A B 128 23.140 42.565 22.508 1.00 47.07 C
ATOM 16 N7 A B 128 22.104 42.204 21.790 1.00 47.35 N
ATOM 17 C5 A B 128 21.327 41.478 22.671 1.00 46.89 C
ATOM 18 C6 A B 128 20.087 40.815 22.514 1.00 46.78 C
ATOM 19 N6 A B 128 19.391 40.792 21.366 1.00 46.29 N
ATOM 20 N1 A B 128 19.582 40.183 23.600 1.00 46.17 N
ATOM 21 C2 A B 128 20.269 40.215 24.749 1.00 46.07 C
ATOM 22 N3 A B 128 21.439 40.801 25.015 1.00 46.35 N
ATOM 23 C4 A B 128 21.927 41.423 23.923 1.00 46.73 C
ATOM 24 P C B 129 27.038 38.481 24.228 1.00 43.99 P
ATOM 25 OP1 C B 129 27.940 37.706 25.108 1.00 43.95 O
ATOM 26 OP2 C B 129 27.488 38.815 22.859 1.00 44.33 O
ATOM 27 O5' C B 129 25.640 37.721 24.068 1.00 43.82 O
TER
Atoms:
C2: (21.745,38.312,21.047)
OP1: (27.940,37.706,25.108)
OP2: (27.488,38.815,22.859)
C4: (23.348,39.714,20.085)
O5': (25.640,37.721,24.068)
C3': (23.603,35.669,23.585)
C1': (22.037,37.387,23.356)
O4': (22.762,37.611,24.558)
C5': (25.036,37.043,25.175)
P: (27.038,38.481,24.228)
O2: (20.674,37.695,21.000)
C4': (23.654,36.508,24.845)
C2': (22.186,35.909,23.056)
O2': (21.146,35.167,23.671)
N1: (22.529,38.231,22.207)
N3: (22.180,39.069,20.002)
N4: (23.739,40.441,19.037)
C6: (23.720,38.900,22.268)
C5: (24.167,39.643,21.251)
O3': (23.868,34.320,23.875)
OP1: (27.940,37.706,25.108)
OP2: (27.488,38.815,22.859)
C4: (23.348,39.714,20.085)
O5': (25.640,37.721,24.068)
C3': (23.603,35.669,23.585)
C1': (22.037,37.387,23.356)
O4': (22.762,37.611,24.558)
C5': (25.036,37.043,25.175)
P: (27.038,38.481,24.228)
O2: (20.674,37.695,21.000)
C4': (23.654,36.508,24.845)
C2': (22.186,35.909,23.056)
O2': (21.146,35.167,23.671)
N1: (22.529,38.231,22.207)
N3: (22.180,39.069,20.002)
N4: (23.739,40.441,19.037)
C6: (23.720,38.900,22.268)
C5: (24.167,39.643,21.251)
O3': (23.868,34.320,23.875)
OP1: (27.929,41.954,20.098)
OP2: (25.555,42.634,19.432)
C3': (25.744,40.739,24.504)
C1': (24.127,42.387,24.833)
C5': (27.103,42.171,22.893)
O4': (25.265,43.020,24.260)
C8: (23.140,42.565,22.508)
O2': (25.141,41.428,26.792)
C6: (20.087,40.815,22.514)
C5: (21.327,41.478,22.671)
C4: (21.927,41.423,23.923)
P: (26.697,42.724,20.367)
C4': (26.381,42.091,24.225)
C2': (24.654,41.120,25.500)
C2: (20.269,40.215,24.749)
N1: (19.582,40.183,23.600)
N3: (21.439,40.801,25.015)
N6: (19.391,40.792,21.366)
N7: (22.104,42.204,21.790)
N9: (23.109,42.134,23.804)
O5': (26.180,42.340,21.821)
O3': (26.684,39.821,25.029)
OP2: (25.555,42.634,19.432)
C3': (25.744,40.739,24.504)
C1': (24.127,42.387,24.833)
C5': (27.103,42.171,22.893)
O4': (25.265,43.020,24.260)
C8: (23.140,42.565,22.508)
O2': (25.141,41.428,26.792)
C6: (20.087,40.815,22.514)
C5: (21.327,41.478,22.671)
C4: (21.927,41.423,23.923)
P: (26.697,42.724,20.367)
C4': (26.381,42.091,24.225)
C2': (24.654,41.120,25.500)
C2: (20.269,40.215,24.749)
N1: (19.582,40.183,23.600)
N3: (21.439,40.801,25.015)
N6: (19.391,40.792,21.366)
N7: (22.104,42.204,21.790)
N9: (23.109,42.134,23.804)
O5': (26.180,42.340,21.821)
O3': (26.684,39.821,25.029)
Image (generated by PyMOL):