Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A232:A231
Extra
PDB:
ATOM 1 O3' A A 231 93.410 103.863 -1.389 1.00 50.88 O
ATOM 2 P C A 232 94.184 104.893 -2.337 1.00 53.75 P
ATOM 3 OP1 C A 232 95.420 104.224 -2.834 1.00 51.48 O
ATOM 4 OP2 C A 232 94.288 106.211 -1.654 1.00 53.06 O
ATOM 5 O5' C A 232 93.180 105.068 -3.552 1.00 50.87 O
ATOM 6 C5' C A 232 92.803 103.949 -4.369 1.00 50.31 C
ATOM 7 C4' C A 232 91.734 104.376 -5.331 1.00 49.46 C
ATOM 8 O4' C A 232 90.495 104.610 -4.613 1.00 49.49 O
ATOM 9 C3' C A 232 92.066 105.714 -5.950 1.00 49.45 C
ATOM 10 O3' C A 232 92.966 105.570 -7.034 1.00 50.96 O
ATOM 11 C2' C A 232 90.697 106.295 -6.279 1.00 48.58 C
ATOM 12 O2' C A 232 90.116 105.808 -7.467 1.00 49.32 O
ATOM 13 C1' C A 232 89.889 105.809 -5.077 1.00 47.39 C
ATOM 14 N1 C A 232 89.906 106.784 -3.980 1.00 45.14 N
ATOM 15 C2 C A 232 88.896 107.739 -3.920 1.00 43.55 C
ATOM 16 O2 C A 232 88.010 107.725 -4.786 1.00 43.90 O
ATOM 17 N3 C A 232 88.906 108.653 -2.930 1.00 42.62 N
ATOM 18 C4 C A 232 89.883 108.637 -2.022 1.00 43.25 C
ATOM 19 N4 C A 232 89.866 109.563 -1.071 1.00 43.63 N
ATOM 20 C5 C A 232 90.927 107.667 -2.054 1.00 44.08 C
ATOM 21 C6 C A 232 90.900 106.768 -3.039 1.00 44.12 C
ATOM 22 P C A 233 93.853 106.827 -7.487 1.00 51.58 P
ATOM 23 OP1 C A 233 94.470 106.442 -8.776 1.00 52.54 O
ATOM 24 OP2 C A 233 94.723 107.273 -6.365 1.00 49.49 O
ATOM 25 O5' C A 233 92.729 107.920 -7.745 1.00 49.71 O
TER
ATOM 1 O3' A B 230 92.566 107.509 3.448 1.00 41.00 O
ATOM 2 P A B 231 92.749 107.967 1.913 1.00 44.43 P
ATOM 3 OP1 A B 231 94.192 108.297 1.756 1.00 44.43 O
ATOM 4 OP2 A B 231 91.716 108.987 1.533 1.00 42.04 O
ATOM 5 O5' A B 231 92.463 106.628 1.096 1.00 43.99 O
ATOM 6 C5' A B 231 93.231 105.438 1.354 1.00 44.96 C
ATOM 7 C4' A B 231 92.518 104.229 0.806 1.00 46.87 C
ATOM 8 O4' A B 231 91.201 104.123 1.397 1.00 46.07 O
ATOM 9 C3' A B 231 92.254 104.298 -0.685 1.00 48.48 C
ATOM 10 O3' A B 231 93.410 103.863 -1.389 1.00 50.88 O
ATOM 11 C2' A B 231 91.058 103.369 -0.865 1.00 48.00 C
ATOM 12 O2' A B 231 91.424 102.005 -0.970 1.00 48.75 O
ATOM 13 C1' A B 231 90.289 103.609 0.441 1.00 45.54 C
ATOM 14 N9 A B 231 89.169 104.543 0.314 1.00 43.52 N
ATOM 15 C8 A B 231 89.214 105.907 0.174 1.00 43.76 C
ATOM 16 N7 A B 231 88.036 106.463 0.027 1.00 43.01 N
ATOM 17 C5 A B 231 87.154 105.399 0.084 1.00 41.66 C
ATOM 18 C6 A B 231 85.754 105.329 -0.019 1.00 42.12 C
ATOM 19 N6 A B 231 84.972 106.389 -0.248 1.00 41.12 N
ATOM 20 N1 A B 231 85.176 104.116 0.110 1.00 43.01 N
ATOM 21 C2 A B 231 85.964 103.052 0.308 1.00 42.31 C
ATOM 22 N3 A B 231 87.292 102.991 0.404 1.00 42.82 N
ATOM 23 C4 A B 231 87.835 104.212 0.282 1.00 42.41 C
ATOM 24 P C B 232 94.184 104.893 -2.337 1.00 53.75 P
ATOM 25 OP1 C B 232 95.420 104.224 -2.834 1.00 51.48 O
ATOM 26 OP2 C B 232 94.288 106.211 -1.654 1.00 53.06 O
ATOM 27 O5' C B 232 93.180 105.068 -3.552 1.00 50.87 O
TER
ATOM 2 P C A 232 94.184 104.893 -2.337 1.00 53.75 P
ATOM 3 OP1 C A 232 95.420 104.224 -2.834 1.00 51.48 O
ATOM 4 OP2 C A 232 94.288 106.211 -1.654 1.00 53.06 O
ATOM 5 O5' C A 232 93.180 105.068 -3.552 1.00 50.87 O
ATOM 6 C5' C A 232 92.803 103.949 -4.369 1.00 50.31 C
ATOM 7 C4' C A 232 91.734 104.376 -5.331 1.00 49.46 C
ATOM 8 O4' C A 232 90.495 104.610 -4.613 1.00 49.49 O
ATOM 9 C3' C A 232 92.066 105.714 -5.950 1.00 49.45 C
ATOM 10 O3' C A 232 92.966 105.570 -7.034 1.00 50.96 O
ATOM 11 C2' C A 232 90.697 106.295 -6.279 1.00 48.58 C
ATOM 12 O2' C A 232 90.116 105.808 -7.467 1.00 49.32 O
ATOM 13 C1' C A 232 89.889 105.809 -5.077 1.00 47.39 C
ATOM 14 N1 C A 232 89.906 106.784 -3.980 1.00 45.14 N
ATOM 15 C2 C A 232 88.896 107.739 -3.920 1.00 43.55 C
ATOM 16 O2 C A 232 88.010 107.725 -4.786 1.00 43.90 O
ATOM 17 N3 C A 232 88.906 108.653 -2.930 1.00 42.62 N
ATOM 18 C4 C A 232 89.883 108.637 -2.022 1.00 43.25 C
ATOM 19 N4 C A 232 89.866 109.563 -1.071 1.00 43.63 N
ATOM 20 C5 C A 232 90.927 107.667 -2.054 1.00 44.08 C
ATOM 21 C6 C A 232 90.900 106.768 -3.039 1.00 44.12 C
ATOM 22 P C A 233 93.853 106.827 -7.487 1.00 51.58 P
ATOM 23 OP1 C A 233 94.470 106.442 -8.776 1.00 52.54 O
ATOM 24 OP2 C A 233 94.723 107.273 -6.365 1.00 49.49 O
ATOM 25 O5' C A 233 92.729 107.920 -7.745 1.00 49.71 O
TER
ATOM 1 O3' A B 230 92.566 107.509 3.448 1.00 41.00 O
ATOM 2 P A B 231 92.749 107.967 1.913 1.00 44.43 P
ATOM 3 OP1 A B 231 94.192 108.297 1.756 1.00 44.43 O
ATOM 4 OP2 A B 231 91.716 108.987 1.533 1.00 42.04 O
ATOM 5 O5' A B 231 92.463 106.628 1.096 1.00 43.99 O
ATOM 6 C5' A B 231 93.231 105.438 1.354 1.00 44.96 C
ATOM 7 C4' A B 231 92.518 104.229 0.806 1.00 46.87 C
ATOM 8 O4' A B 231 91.201 104.123 1.397 1.00 46.07 O
ATOM 9 C3' A B 231 92.254 104.298 -0.685 1.00 48.48 C
ATOM 10 O3' A B 231 93.410 103.863 -1.389 1.00 50.88 O
ATOM 11 C2' A B 231 91.058 103.369 -0.865 1.00 48.00 C
ATOM 12 O2' A B 231 91.424 102.005 -0.970 1.00 48.75 O
ATOM 13 C1' A B 231 90.289 103.609 0.441 1.00 45.54 C
ATOM 14 N9 A B 231 89.169 104.543 0.314 1.00 43.52 N
ATOM 15 C8 A B 231 89.214 105.907 0.174 1.00 43.76 C
ATOM 16 N7 A B 231 88.036 106.463 0.027 1.00 43.01 N
ATOM 17 C5 A B 231 87.154 105.399 0.084 1.00 41.66 C
ATOM 18 C6 A B 231 85.754 105.329 -0.019 1.00 42.12 C
ATOM 19 N6 A B 231 84.972 106.389 -0.248 1.00 41.12 N
ATOM 20 N1 A B 231 85.176 104.116 0.110 1.00 43.01 N
ATOM 21 C2 A B 231 85.964 103.052 0.308 1.00 42.31 C
ATOM 22 N3 A B 231 87.292 102.991 0.404 1.00 42.82 N
ATOM 23 C4 A B 231 87.835 104.212 0.282 1.00 42.41 C
ATOM 24 P C B 232 94.184 104.893 -2.337 1.00 53.75 P
ATOM 25 OP1 C B 232 95.420 104.224 -2.834 1.00 51.48 O
ATOM 26 OP2 C B 232 94.288 106.211 -1.654 1.00 53.06 O
ATOM 27 O5' C B 232 93.180 105.068 -3.552 1.00 50.87 O
TER
Atoms:
C2: (88.896,107.739,-3.920)
OP1: (95.420,104.224,-2.834)
OP2: (94.288,106.211,-1.654)
C4: (89.883,108.637,-2.022)
O5': (93.180,105.068,-3.552)
C3': (92.066,105.714,-5.950)
C1': (89.889,105.809,-5.077)
O4': (90.495,104.610,-4.613)
C5': (92.803,103.949,-4.369)
P: (94.184,104.893,-2.337)
O2: (88.010,107.725,-4.786)
C4': (91.734,104.376,-5.331)
C2': (90.697,106.295,-6.279)
O2': (90.116,105.808,-7.467)
N1: (89.906,106.784,-3.980)
N3: (88.906,108.653,-2.930)
N4: (89.866,109.563,-1.071)
C6: (90.900,106.768,-3.039)
C5: (90.927,107.667,-2.054)
O3': (92.966,105.570,-7.034)
OP1: (95.420,104.224,-2.834)
OP2: (94.288,106.211,-1.654)
C4: (89.883,108.637,-2.022)
O5': (93.180,105.068,-3.552)
C3': (92.066,105.714,-5.950)
C1': (89.889,105.809,-5.077)
O4': (90.495,104.610,-4.613)
C5': (92.803,103.949,-4.369)
P: (94.184,104.893,-2.337)
O2: (88.010,107.725,-4.786)
C4': (91.734,104.376,-5.331)
C2': (90.697,106.295,-6.279)
O2': (90.116,105.808,-7.467)
N1: (89.906,106.784,-3.980)
N3: (88.906,108.653,-2.930)
N4: (89.866,109.563,-1.071)
C6: (90.900,106.768,-3.039)
C5: (90.927,107.667,-2.054)
O3': (92.966,105.570,-7.034)
OP1: (94.192,108.297,1.756)
OP2: (91.716,108.987,1.533)
C3': (92.254,104.298,-0.685)
C1': (90.289,103.609,0.441)
C5': (93.231,105.438,1.354)
O4': (91.201,104.123,1.397)
C8: (89.214,105.907,0.174)
O2': (91.424,102.005,-0.970)
C6: (85.754,105.329,-0.019)
C5: (87.154,105.399,0.084)
C4: (87.835,104.212,0.282)
P: (92.749,107.967,1.913)
C4': (92.518,104.229,0.806)
C2': (91.058,103.369,-0.865)
C2: (85.964,103.052,0.308)
N1: (85.176,104.116,0.110)
N3: (87.292,102.991,0.404)
N6: (84.972,106.389,-0.248)
N7: (88.036,106.463,0.027)
N9: (89.169,104.543,0.314)
O5': (92.463,106.628,1.096)
O3': (93.410,103.863,-1.389)
OP2: (91.716,108.987,1.533)
C3': (92.254,104.298,-0.685)
C1': (90.289,103.609,0.441)
C5': (93.231,105.438,1.354)
O4': (91.201,104.123,1.397)
C8: (89.214,105.907,0.174)
O2': (91.424,102.005,-0.970)
C6: (85.754,105.329,-0.019)
C5: (87.154,105.399,0.084)
C4: (87.835,104.212,0.282)
P: (92.749,107.967,1.913)
C4': (92.518,104.229,0.806)
C2': (91.058,103.369,-0.865)
C2: (85.964,103.052,0.308)
N1: (85.176,104.116,0.110)
N3: (87.292,102.991,0.404)
N6: (84.972,106.389,-0.248)
N7: (88.036,106.463,0.027)
N9: (89.169,104.543,0.314)
O5': (92.463,106.628,1.096)
O3': (93.410,103.863,-1.389)
Image (generated by PyMOL):