ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZHO:H28:H27

Extra

PDB:
ATOM 1 O3' A A 27 -3.542 16.158 17.588 1.00 39.72 O
ATOM 2 P C A 28 -5.131 16.015 17.454 1.00 40.72 P
ATOM 3 OP1 C A 28 -5.656 15.774 18.822 1.00 41.82 O
ATOM 4 OP2 C A 28 -5.406 15.027 16.374 1.00 39.92 O
ATOM 5 O5' C A 28 -5.612 17.461 16.976 1.00 41.50 O
ATOM 6 C5' C A 28 -5.460 18.608 17.814 1.00 40.52 C
ATOM 7 C4' C A 28 -5.724 19.868 17.023 1.00 39.78 C
ATOM 8 O4' C A 28 -4.677 20.032 16.039 1.00 39.64 O
ATOM 9 C3' C A 28 -7.023 19.863 16.235 1.00 39.74 C
ATOM 10 O3' C A 28 -8.071 20.405 17.029 1.00 42.01 O
ATOM 11 C2' C A 28 -6.704 20.777 15.066 1.00 39.57 C
ATOM 12 O2' C A 28 -6.790 22.132 15.415 1.00 40.87 O
ATOM 13 C1' C A 28 -5.237 20.456 14.818 1.00 40.34 C
ATOM 14 N1 C A 28 -5.020 19.408 13.814 1.00 41.05 N
ATOM 15 C2 C A 28 -4.857 19.799 12.511 1.00 42.31 C
ATOM 16 O2 C A 28 -4.949 21.001 12.251 1.00 45.11 O
ATOM 17 N3 C A 28 -4.606 18.874 11.561 1.00 41.95 N
ATOM 18 C4 C A 28 -4.536 17.589 11.884 1.00 41.33 C
ATOM 19 N4 C A 28 -4.290 16.714 10.904 1.00 38.94 N
ATOM 20 C5 C A 28 -4.721 17.147 13.221 1.00 41.98 C
ATOM 21 C6 C A 28 -4.961 18.086 14.150 1.00 41.36 C
ATOM 22 P U A 29 -9.570 19.842 16.868 1.00 44.23 P
ATOM 23 OP1 U A 29 -10.425 20.526 17.877 1.00 44.61 O
ATOM 24 OP2 U A 29 -9.513 18.357 16.828 1.00 43.26 O
ATOM 25 O5' U A 29 -10.029 20.360 15.440 1.00 43.66 O
TER

ATOM 1 O3' A B 26 -1.728 12.672 12.989 1.00 48.64 O
ATOM 2 P A B 27 -3.073 13.543 13.086 1.00 47.23 P
ATOM 3 OP1 A B 27 -4.107 12.691 13.722 1.00 46.16 O
ATOM 4 OP2 A B 27 -3.348 14.158 11.761 1.00 48.64 O
ATOM 5 O5' A B 27 -2.689 14.677 14.140 1.00 46.53 O
ATOM 6 C5' A B 27 -2.089 14.321 15.384 1.00 42.15 C
ATOM 7 C4' A B 27 -1.694 15.550 16.175 1.00 39.69 C
ATOM 8 O4' A B 27 -0.696 16.317 15.460 1.00 38.60 O
ATOM 9 C3' A B 27 -2.785 16.557 16.464 1.00 39.08 C
ATOM 10 O3' A B 27 -3.542 16.158 17.588 1.00 39.72 O
ATOM 11 C2' A B 27 -1.971 17.791 16.798 1.00 39.55 C
ATOM 12 O2' A B 27 -1.427 17.718 18.099 1.00 42.00 O
ATOM 13 C1' A B 27 -0.848 17.684 15.772 1.00 39.02 C
ATOM 14 N9 A B 27 -1.147 18.407 14.539 1.00 40.70 N
ATOM 15 C8 A B 27 -1.404 17.916 13.282 1.00 41.11 C
ATOM 16 N7 A B 27 -1.582 18.850 12.378 1.00 41.11 N
ATOM 17 C5 A B 27 -1.443 20.034 13.091 1.00 40.31 C
ATOM 18 C6 A B 27 -1.501 21.386 12.711 1.00 41.02 C
ATOM 19 N6 A B 27 -1.711 21.803 11.462 1.00 43.66 N
ATOM 20 N1 A B 27 -1.328 22.314 13.673 1.00 40.95 N
ATOM 21 C2 A B 27 -1.103 21.904 14.927 1.00 40.57 C
ATOM 22 N3 A B 27 -1.015 20.673 15.403 1.00 39.54 N
ATOM 23 C4 A B 27 -1.194 19.773 14.424 1.00 40.06 C
ATOM 24 P C B 28 -5.131 16.015 17.454 1.00 40.72 P
ATOM 25 OP1 C B 28 -5.656 15.774 18.822 1.00 41.82 O
ATOM 26 OP2 C B 28 -5.406 15.027 16.374 1.00 39.92 O
ATOM 27 O5' C B 28 -5.612 17.461 16.976 1.00 41.50 O
TER

Atoms:
C2: (-4.857,19.799,12.511)
OP1: (-5.656,15.774,18.822)
OP2: (-5.406,15.027,16.374)
C4: (-4.536,17.589,11.884)
O5': (-5.612,17.461,16.976)
C3': (-7.023,19.863,16.235)
C1': (-5.237,20.456,14.818)
O4': (-4.677,20.032,16.039)
C5': (-5.460,18.608,17.814)
P: (-5.131,16.015,17.454)
O2: (-4.949,21.001,12.251)
C4': (-5.724,19.868,17.023)
C2': (-6.704,20.777,15.066)
O2': (-6.790,22.132,15.415)
N1: (-5.020,19.408,13.814)
N3: (-4.606,18.874,11.561)
N4: (-4.290,16.714,10.904)
C6: (-4.961,18.086,14.150)
C5: (-4.721,17.147,13.221)
O3': (-8.071,20.405,17.029)
OP1: (-4.107,12.691,13.722)
OP2: (-3.348,14.158,11.761)
C3': (-2.785,16.557,16.464)
C1': (-0.848,17.684,15.772)
C5': (-2.089,14.321,15.384)
O4': (-0.696,16.317,15.460)
C8: (-1.404,17.916,13.282)
O2': (-1.427,17.718,18.099)
C6: (-1.501,21.386,12.711)
C5: (-1.443,20.034,13.091)
C4: (-1.194,19.773,14.424)
P: (-3.073,13.543,13.086)
C4': (-1.694,15.550,16.175)
C2': (-1.971,17.791,16.798)
C2: (-1.103,21.904,14.927)
N1: (-1.328,22.314,13.673)
N3: (-1.015,20.673,15.403)
N6: (-1.711,21.803,11.462)
N7: (-1.582,18.850,12.378)
N9: (-1.147,18.407,14.539)
O5': (-2.689,14.677,14.140)
O3': (-3.542,16.158,17.588)
Image (generated by PyMOL):
PyMOL image
show in jmol