Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01039:01038
Extra
PDB:
ATOM 1 O3' A A1038 34.295 111.011 106.470 1.00 41.84 O
ATOM 2 P C A1039 34.013 109.905 105.345 1.00 44.47 P
ATOM 3 OP1 C A1039 33.887 110.658 104.083 1.00 42.48 O
ATOM 4 OP2 C A1039 32.917 108.988 105.771 1.00 43.44 O
ATOM 5 O5' C A1039 35.328 109.015 105.323 1.00 46.36 O
ATOM 6 C5' C A1039 36.433 109.303 104.469 1.00 49.52 C
ATOM 7 C4' C A1039 37.533 108.310 104.741 1.00 53.46 C
ATOM 8 O4' C A1039 37.900 108.422 106.147 1.00 55.48 O
ATOM 9 C3' C A1039 37.116 106.849 104.629 1.00 55.70 C
ATOM 10 O3' C A1039 37.089 106.237 103.341 1.00 56.59 O
ATOM 11 C2' C A1039 38.186 106.185 105.477 1.00 57.42 C
ATOM 12 O2' C A1039 39.457 106.174 104.840 1.00 58.54 O
ATOM 13 C1' C A1039 38.223 107.137 106.666 1.00 56.42 C
ATOM 14 N1 C A1039 37.208 106.747 107.674 1.00 57.62 N
ATOM 15 C2 C A1039 37.592 105.916 108.746 1.00 58.92 C
ATOM 16 O2 C A1039 38.768 105.523 108.819 1.00 61.94 O
ATOM 17 N3 C A1039 36.670 105.562 109.671 1.00 58.41 N
ATOM 18 C4 C A1039 35.412 105.999 109.562 1.00 58.43 C
ATOM 19 N4 C A1039 34.535 105.638 110.511 1.00 57.20 N
ATOM 20 C5 C A1039 34.994 106.829 108.481 1.00 56.92 C
ATOM 21 C6 C A1039 35.914 107.176 107.572 1.00 56.04 C
ATOM 22 P A A1040 37.742 106.957 102.067 1.00 57.53 P
ATOM 23 OP1 A A1040 39.004 107.620 102.482 1.00 57.28 O
ATOM 24 OP2 A A1040 36.682 107.744 101.390 1.00 57.31 O
ATOM 25 O5' A A1040 38.143 105.719 101.149 1.00 51.23 O
TER
ATOM 1 O3' A B1037 31.079 109.254 111.492 1.00 40.11 O
ATOM 2 P A B1038 31.507 108.277 110.292 1.00 41.07 P
ATOM 3 OP1 A B1038 30.298 108.084 109.472 1.00 42.01 O
ATOM 4 OP2 A B1038 32.203 107.095 110.856 1.00 40.12 O
ATOM 5 O5' A B1038 32.568 109.130 109.454 1.00 41.45 O
ATOM 6 C5' A B1038 32.232 110.432 108.937 1.00 41.15 C
ATOM 7 C4' A B1038 33.479 111.250 108.728 1.00 42.50 C
ATOM 8 O4' A B1038 34.133 111.424 110.003 1.00 43.92 O
ATOM 9 C3' A B1038 34.539 110.627 107.825 1.00 42.31 C
ATOM 10 O3' A B1038 34.295 111.011 106.470 1.00 41.84 O
ATOM 11 C2' A B1038 35.838 111.269 108.319 1.00 41.26 C
ATOM 12 O2' A B1038 36.114 112.513 107.710 1.00 42.51 O
ATOM 13 C1' A B1038 35.530 111.521 109.800 1.00 41.96 C
ATOM 14 N9 A B1038 36.199 110.673 110.781 1.00 40.11 N
ATOM 15 C8 A B1038 36.116 109.312 110.940 1.00 42.20 C
ATOM 16 N7 A B1038 36.805 108.859 111.959 1.00 42.38 N
ATOM 17 C5 A B1038 37.390 109.999 112.497 1.00 38.38 C
ATOM 18 C6 A B1038 38.237 110.194 113.587 1.00 35.31 C
ATOM 19 N6 A B1038 38.671 109.208 114.372 1.00 34.40 N
ATOM 20 N1 A B1038 38.633 111.451 113.850 1.00 34.23 N
ATOM 21 C2 A B1038 38.211 112.438 113.064 1.00 33.67 C
ATOM 22 N3 A B1038 37.421 112.383 112.008 1.00 36.91 N
ATOM 23 C4 A B1038 37.036 111.118 111.774 1.00 38.13 C
ATOM 24 P C B1039 34.013 109.905 105.345 1.00 44.47 P
ATOM 25 OP1 C B1039 33.887 110.658 104.083 1.00 42.48 O
ATOM 26 OP2 C B1039 32.917 108.988 105.771 1.00 43.44 O
ATOM 27 O5' C B1039 35.328 109.015 105.323 1.00 46.36 O
TER
ATOM 2 P C A1039 34.013 109.905 105.345 1.00 44.47 P
ATOM 3 OP1 C A1039 33.887 110.658 104.083 1.00 42.48 O
ATOM 4 OP2 C A1039 32.917 108.988 105.771 1.00 43.44 O
ATOM 5 O5' C A1039 35.328 109.015 105.323 1.00 46.36 O
ATOM 6 C5' C A1039 36.433 109.303 104.469 1.00 49.52 C
ATOM 7 C4' C A1039 37.533 108.310 104.741 1.00 53.46 C
ATOM 8 O4' C A1039 37.900 108.422 106.147 1.00 55.48 O
ATOM 9 C3' C A1039 37.116 106.849 104.629 1.00 55.70 C
ATOM 10 O3' C A1039 37.089 106.237 103.341 1.00 56.59 O
ATOM 11 C2' C A1039 38.186 106.185 105.477 1.00 57.42 C
ATOM 12 O2' C A1039 39.457 106.174 104.840 1.00 58.54 O
ATOM 13 C1' C A1039 38.223 107.137 106.666 1.00 56.42 C
ATOM 14 N1 C A1039 37.208 106.747 107.674 1.00 57.62 N
ATOM 15 C2 C A1039 37.592 105.916 108.746 1.00 58.92 C
ATOM 16 O2 C A1039 38.768 105.523 108.819 1.00 61.94 O
ATOM 17 N3 C A1039 36.670 105.562 109.671 1.00 58.41 N
ATOM 18 C4 C A1039 35.412 105.999 109.562 1.00 58.43 C
ATOM 19 N4 C A1039 34.535 105.638 110.511 1.00 57.20 N
ATOM 20 C5 C A1039 34.994 106.829 108.481 1.00 56.92 C
ATOM 21 C6 C A1039 35.914 107.176 107.572 1.00 56.04 C
ATOM 22 P A A1040 37.742 106.957 102.067 1.00 57.53 P
ATOM 23 OP1 A A1040 39.004 107.620 102.482 1.00 57.28 O
ATOM 24 OP2 A A1040 36.682 107.744 101.390 1.00 57.31 O
ATOM 25 O5' A A1040 38.143 105.719 101.149 1.00 51.23 O
TER
ATOM 1 O3' A B1037 31.079 109.254 111.492 1.00 40.11 O
ATOM 2 P A B1038 31.507 108.277 110.292 1.00 41.07 P
ATOM 3 OP1 A B1038 30.298 108.084 109.472 1.00 42.01 O
ATOM 4 OP2 A B1038 32.203 107.095 110.856 1.00 40.12 O
ATOM 5 O5' A B1038 32.568 109.130 109.454 1.00 41.45 O
ATOM 6 C5' A B1038 32.232 110.432 108.937 1.00 41.15 C
ATOM 7 C4' A B1038 33.479 111.250 108.728 1.00 42.50 C
ATOM 8 O4' A B1038 34.133 111.424 110.003 1.00 43.92 O
ATOM 9 C3' A B1038 34.539 110.627 107.825 1.00 42.31 C
ATOM 10 O3' A B1038 34.295 111.011 106.470 1.00 41.84 O
ATOM 11 C2' A B1038 35.838 111.269 108.319 1.00 41.26 C
ATOM 12 O2' A B1038 36.114 112.513 107.710 1.00 42.51 O
ATOM 13 C1' A B1038 35.530 111.521 109.800 1.00 41.96 C
ATOM 14 N9 A B1038 36.199 110.673 110.781 1.00 40.11 N
ATOM 15 C8 A B1038 36.116 109.312 110.940 1.00 42.20 C
ATOM 16 N7 A B1038 36.805 108.859 111.959 1.00 42.38 N
ATOM 17 C5 A B1038 37.390 109.999 112.497 1.00 38.38 C
ATOM 18 C6 A B1038 38.237 110.194 113.587 1.00 35.31 C
ATOM 19 N6 A B1038 38.671 109.208 114.372 1.00 34.40 N
ATOM 20 N1 A B1038 38.633 111.451 113.850 1.00 34.23 N
ATOM 21 C2 A B1038 38.211 112.438 113.064 1.00 33.67 C
ATOM 22 N3 A B1038 37.421 112.383 112.008 1.00 36.91 N
ATOM 23 C4 A B1038 37.036 111.118 111.774 1.00 38.13 C
ATOM 24 P C B1039 34.013 109.905 105.345 1.00 44.47 P
ATOM 25 OP1 C B1039 33.887 110.658 104.083 1.00 42.48 O
ATOM 26 OP2 C B1039 32.917 108.988 105.771 1.00 43.44 O
ATOM 27 O5' C B1039 35.328 109.015 105.323 1.00 46.36 O
TER
Atoms:
C2: (37.592,105.916,108.746)
OP1: (33.887,110.658,104.083)
OP2: (32.917,108.988,105.771)
C4: (35.412,105.999,109.562)
O5': (35.328,109.015,105.323)
C3': (37.116,106.849,104.629)
C1': (38.223,107.137,106.666)
O4': (37.900,108.422,106.147)
C5': (36.433,109.303,104.469)
P: (34.013,109.905,105.345)
O2: (38.768,105.523,108.819)
C4': (37.533,108.310,104.741)
C2': (38.186,106.185,105.477)
O2': (39.457,106.174,104.840)
N1: (37.208,106.747,107.674)
N3: (36.670,105.562,109.671)
N4: (34.535,105.638,110.511)
C6: (35.914,107.176,107.572)
C5: (34.994,106.829,108.481)
O3': (37.089,106.237,103.341)
OP1: (33.887,110.658,104.083)
OP2: (32.917,108.988,105.771)
C4: (35.412,105.999,109.562)
O5': (35.328,109.015,105.323)
C3': (37.116,106.849,104.629)
C1': (38.223,107.137,106.666)
O4': (37.900,108.422,106.147)
C5': (36.433,109.303,104.469)
P: (34.013,109.905,105.345)
O2: (38.768,105.523,108.819)
C4': (37.533,108.310,104.741)
C2': (38.186,106.185,105.477)
O2': (39.457,106.174,104.840)
N1: (37.208,106.747,107.674)
N3: (36.670,105.562,109.671)
N4: (34.535,105.638,110.511)
C6: (35.914,107.176,107.572)
C5: (34.994,106.829,108.481)
O3': (37.089,106.237,103.341)
OP1: (30.298,108.084,109.472)
OP2: (32.203,107.095,110.856)
C3': (34.539,110.627,107.825)
C1': (35.530,111.521,109.800)
C5': (32.232,110.432,108.937)
O4': (34.133,111.424,110.003)
C8: (36.116,109.312,110.940)
O2': (36.114,112.513,107.710)
C6: (38.237,110.194,113.587)
C5: (37.390,109.999,112.497)
C4: (37.036,111.118,111.774)
P: (31.507,108.277,110.292)
C4': (33.479,111.250,108.728)
C2': (35.838,111.269,108.319)
C2: (38.211,112.438,113.064)
N1: (38.633,111.451,113.850)
N3: (37.421,112.383,112.008)
N6: (38.671,109.208,114.372)
N7: (36.805,108.859,111.959)
N9: (36.199,110.673,110.781)
O5': (32.568,109.130,109.454)
O3': (34.295,111.011,106.470)
OP2: (32.203,107.095,110.856)
C3': (34.539,110.627,107.825)
C1': (35.530,111.521,109.800)
C5': (32.232,110.432,108.937)
O4': (34.133,111.424,110.003)
C8: (36.116,109.312,110.940)
O2': (36.114,112.513,107.710)
C6: (38.237,110.194,113.587)
C5: (37.390,109.999,112.497)
C4: (37.036,111.118,111.774)
P: (31.507,108.277,110.292)
C4': (33.479,111.250,108.728)
C2': (35.838,111.269,108.319)
C2: (38.211,112.438,113.064)
N1: (38.633,111.451,113.850)
N3: (37.421,112.383,112.008)
N6: (38.671,109.208,114.372)
N7: (36.805,108.859,111.959)
N9: (36.199,110.673,110.781)
O5': (32.568,109.130,109.454)
O3': (34.295,111.011,106.470)
Image (generated by PyMOL):