Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A498:A497
Extra
PDB:
ATOM 1 O3' A A 497 24.344-105.494 -27.932 1.00 61.70 O
ATOM 2 P C A 498 23.670-105.385 -26.466 1.00 54.06 P
ATOM 3 OP1 C A 498 22.223-105.102 -26.621 1.00 54.21 O
ATOM 4 OP2 C A 498 24.491-104.456 -25.661 1.00 56.35 O
ATOM 5 O5' C A 498 23.868-106.832 -25.813 1.00 55.54 O
ATOM 6 C5' C A 498 22.946-107.897 -26.034 1.00 55.15 C
ATOM 7 C4' C A 498 23.348-109.112 -25.223 1.00 61.93 C
ATOM 8 O4' C A 498 24.504-109.771 -25.809 1.00 63.60 O
ATOM 9 C3' C A 498 23.774-108.825 -23.793 1.00 62.09 C
ATOM 10 O3' C A 498 22.661-108.677 -22.931 1.00 66.40 O
ATOM 11 C2' C A 498 24.668-110.015 -23.442 1.00 54.55 C
ATOM 12 O2' C A 498 24.009-111.183 -22.993 1.00 41.62 O
ATOM 13 C1' C A 498 25.334-110.300 -24.783 1.00 56.85 C
ATOM 14 N1 C A 498 26.672-109.677 -24.882 1.00 59.33 N
ATOM 15 C2 C A 498 27.793-110.426 -24.524 1.00 58.84 C
ATOM 16 O2 C A 498 27.635-111.575 -24.107 1.00 63.59 O
ATOM 17 N3 C A 498 29.018-109.879 -24.641 1.00 58.21 N
ATOM 18 C4 C A 498 29.150-108.633 -25.095 1.00 62.06 C
ATOM 19 N4 C A 498 30.386-108.140 -25.239 1.00 66.67 N
ATOM 20 C5 C A 498 28.026-107.836 -25.438 1.00 63.35 C
ATOM 21 C6 C A 498 26.817-108.392 -25.320 1.00 60.61 C
ATOM 22 P C A 499 22.716-107.597 -21.743 1.00 68.58 P
ATOM 23 OP1 C A 499 21.325-107.352 -21.295 1.00 59.23 O
ATOM 24 OP2 C A 499 23.567-106.454 -22.178 1.00 63.08 O
ATOM 25 O5' C A 499 23.484-108.339 -20.563 1.00 53.33 O
TER
ATOM 1 O3' A B 496 30.216-105.327 -29.523 1.00 63.63 O
ATOM 2 P A B 497 29.666-104.848 -28.095 1.00 54.89 P
ATOM 3 OP1 A B 497 29.677-103.369 -28.046 1.00 43.50 O
ATOM 4 OP2 A B 497 30.338-105.614 -27.023 1.00 58.06 O
ATOM 5 O5' A B 497 28.157-105.354 -28.174 1.00 64.22 O
ATOM 6 C5' A B 497 27.327-105.015 -29.287 1.00 63.54 C
ATOM 7 C4' A B 497 26.220-106.030 -29.433 1.00 68.52 C
ATOM 8 O4' A B 497 26.802-107.283 -29.871 1.00 71.06 O
ATOM 9 C3' A B 497 25.460-106.367 -28.154 1.00 67.40 C
ATOM 10 O3' A B 497 24.344-105.494 -27.932 1.00 61.70 O
ATOM 11 C2' A B 497 24.986-107.797 -28.398 1.00 70.79 C
ATOM 12 O2' A B 497 23.727-107.842 -29.022 1.00 72.03 O
ATOM 13 C1' A B 497 26.067-108.363 -29.329 1.00 70.63 C
ATOM 14 N9 A B 497 26.993-109.310 -28.702 1.00 65.45 N
ATOM 15 C8 A B 497 28.313-109.110 -28.380 1.00 64.87 C
ATOM 16 N7 A B 497 28.879-110.142 -27.803 1.00 62.36 N
ATOM 17 C5 A B 497 27.871-111.092 -27.756 1.00 60.47 C
ATOM 18 C6 A B 497 27.840-112.407 -27.271 1.00 59.41 C
ATOM 19 N6 A B 497 28.898-113.017 -26.727 1.00 62.53 N
ATOM 20 N1 A B 497 26.674-113.086 -27.367 1.00 55.74 N
ATOM 21 C2 A B 497 25.622-112.474 -27.913 1.00 57.83 C
ATOM 22 N3 A B 497 25.529-111.243 -28.410 1.00 60.99 N
ATOM 23 C4 A B 497 26.703-110.596 -28.303 1.00 63.26 C
ATOM 24 P C B 498 23.670-105.385 -26.466 1.00 54.06 P
ATOM 25 OP1 C B 498 22.223-105.102 -26.621 1.00 54.21 O
ATOM 26 OP2 C B 498 24.491-104.456 -25.661 1.00 56.35 O
ATOM 27 O5' C B 498 23.868-106.832 -25.813 1.00 55.54 O
TER
ATOM 2 P C A 498 23.670-105.385 -26.466 1.00 54.06 P
ATOM 3 OP1 C A 498 22.223-105.102 -26.621 1.00 54.21 O
ATOM 4 OP2 C A 498 24.491-104.456 -25.661 1.00 56.35 O
ATOM 5 O5' C A 498 23.868-106.832 -25.813 1.00 55.54 O
ATOM 6 C5' C A 498 22.946-107.897 -26.034 1.00 55.15 C
ATOM 7 C4' C A 498 23.348-109.112 -25.223 1.00 61.93 C
ATOM 8 O4' C A 498 24.504-109.771 -25.809 1.00 63.60 O
ATOM 9 C3' C A 498 23.774-108.825 -23.793 1.00 62.09 C
ATOM 10 O3' C A 498 22.661-108.677 -22.931 1.00 66.40 O
ATOM 11 C2' C A 498 24.668-110.015 -23.442 1.00 54.55 C
ATOM 12 O2' C A 498 24.009-111.183 -22.993 1.00 41.62 O
ATOM 13 C1' C A 498 25.334-110.300 -24.783 1.00 56.85 C
ATOM 14 N1 C A 498 26.672-109.677 -24.882 1.00 59.33 N
ATOM 15 C2 C A 498 27.793-110.426 -24.524 1.00 58.84 C
ATOM 16 O2 C A 498 27.635-111.575 -24.107 1.00 63.59 O
ATOM 17 N3 C A 498 29.018-109.879 -24.641 1.00 58.21 N
ATOM 18 C4 C A 498 29.150-108.633 -25.095 1.00 62.06 C
ATOM 19 N4 C A 498 30.386-108.140 -25.239 1.00 66.67 N
ATOM 20 C5 C A 498 28.026-107.836 -25.438 1.00 63.35 C
ATOM 21 C6 C A 498 26.817-108.392 -25.320 1.00 60.61 C
ATOM 22 P C A 499 22.716-107.597 -21.743 1.00 68.58 P
ATOM 23 OP1 C A 499 21.325-107.352 -21.295 1.00 59.23 O
ATOM 24 OP2 C A 499 23.567-106.454 -22.178 1.00 63.08 O
ATOM 25 O5' C A 499 23.484-108.339 -20.563 1.00 53.33 O
TER
ATOM 1 O3' A B 496 30.216-105.327 -29.523 1.00 63.63 O
ATOM 2 P A B 497 29.666-104.848 -28.095 1.00 54.89 P
ATOM 3 OP1 A B 497 29.677-103.369 -28.046 1.00 43.50 O
ATOM 4 OP2 A B 497 30.338-105.614 -27.023 1.00 58.06 O
ATOM 5 O5' A B 497 28.157-105.354 -28.174 1.00 64.22 O
ATOM 6 C5' A B 497 27.327-105.015 -29.287 1.00 63.54 C
ATOM 7 C4' A B 497 26.220-106.030 -29.433 1.00 68.52 C
ATOM 8 O4' A B 497 26.802-107.283 -29.871 1.00 71.06 O
ATOM 9 C3' A B 497 25.460-106.367 -28.154 1.00 67.40 C
ATOM 10 O3' A B 497 24.344-105.494 -27.932 1.00 61.70 O
ATOM 11 C2' A B 497 24.986-107.797 -28.398 1.00 70.79 C
ATOM 12 O2' A B 497 23.727-107.842 -29.022 1.00 72.03 O
ATOM 13 C1' A B 497 26.067-108.363 -29.329 1.00 70.63 C
ATOM 14 N9 A B 497 26.993-109.310 -28.702 1.00 65.45 N
ATOM 15 C8 A B 497 28.313-109.110 -28.380 1.00 64.87 C
ATOM 16 N7 A B 497 28.879-110.142 -27.803 1.00 62.36 N
ATOM 17 C5 A B 497 27.871-111.092 -27.756 1.00 60.47 C
ATOM 18 C6 A B 497 27.840-112.407 -27.271 1.00 59.41 C
ATOM 19 N6 A B 497 28.898-113.017 -26.727 1.00 62.53 N
ATOM 20 N1 A B 497 26.674-113.086 -27.367 1.00 55.74 N
ATOM 21 C2 A B 497 25.622-112.474 -27.913 1.00 57.83 C
ATOM 22 N3 A B 497 25.529-111.243 -28.410 1.00 60.99 N
ATOM 23 C4 A B 497 26.703-110.596 -28.303 1.00 63.26 C
ATOM 24 P C B 498 23.670-105.385 -26.466 1.00 54.06 P
ATOM 25 OP1 C B 498 22.223-105.102 -26.621 1.00 54.21 O
ATOM 26 OP2 C B 498 24.491-104.456 -25.661 1.00 56.35 O
ATOM 27 O5' C B 498 23.868-106.832 -25.813 1.00 55.54 O
TER
Atoms:
C2: (27.793,-110.426,-24.524)
OP1: (22.223,-105.102,-26.621)
OP2: (24.491,-104.456,-25.661)
C4: (29.150,-108.633,-25.095)
O5': (23.868,-106.832,-25.813)
C3': (23.774,-108.825,-23.793)
C1': (25.334,-110.300,-24.783)
O4': (24.504,-109.771,-25.809)
C5': (22.946,-107.897,-26.034)
P: (23.670,-105.385,-26.466)
O2: (27.635,-111.575,-24.107)
C4': (23.348,-109.112,-25.223)
C2': (24.668,-110.015,-23.442)
O2': (24.009,-111.183,-22.993)
N1: (26.672,-109.677,-24.882)
N3: (29.018,-109.879,-24.641)
N4: (30.386,-108.140,-25.239)
C6: (26.817,-108.392,-25.320)
C5: (28.026,-107.836,-25.438)
O3': (22.661,-108.677,-22.931)
OP1: (22.223,-105.102,-26.621)
OP2: (24.491,-104.456,-25.661)
C4: (29.150,-108.633,-25.095)
O5': (23.868,-106.832,-25.813)
C3': (23.774,-108.825,-23.793)
C1': (25.334,-110.300,-24.783)
O4': (24.504,-109.771,-25.809)
C5': (22.946,-107.897,-26.034)
P: (23.670,-105.385,-26.466)
O2: (27.635,-111.575,-24.107)
C4': (23.348,-109.112,-25.223)
C2': (24.668,-110.015,-23.442)
O2': (24.009,-111.183,-22.993)
N1: (26.672,-109.677,-24.882)
N3: (29.018,-109.879,-24.641)
N4: (30.386,-108.140,-25.239)
C6: (26.817,-108.392,-25.320)
C5: (28.026,-107.836,-25.438)
O3': (22.661,-108.677,-22.931)
OP1: (29.677,-103.369,-28.046)
OP2: (30.338,-105.614,-27.023)
C3': (25.460,-106.367,-28.154)
C1': (26.067,-108.363,-29.329)
C5': (27.327,-105.015,-29.287)
O4': (26.802,-107.283,-29.871)
C8: (28.313,-109.110,-28.380)
O2': (23.727,-107.842,-29.022)
C6: (27.840,-112.407,-27.271)
C5: (27.871,-111.092,-27.756)
C4: (26.703,-110.596,-28.303)
P: (29.666,-104.848,-28.095)
C4': (26.220,-106.030,-29.433)
C2': (24.986,-107.797,-28.398)
C2: (25.622,-112.474,-27.913)
N1: (26.674,-113.086,-27.367)
N3: (25.529,-111.243,-28.410)
N6: (28.898,-113.017,-26.727)
N7: (28.879,-110.142,-27.803)
N9: (26.993,-109.310,-28.702)
O5': (28.157,-105.354,-28.174)
O3': (24.344,-105.494,-27.932)
OP2: (30.338,-105.614,-27.023)
C3': (25.460,-106.367,-28.154)
C1': (26.067,-108.363,-29.329)
C5': (27.327,-105.015,-29.287)
O4': (26.802,-107.283,-29.871)
C8: (28.313,-109.110,-28.380)
O2': (23.727,-107.842,-29.022)
C6: (27.840,-112.407,-27.271)
C5: (27.871,-111.092,-27.756)
C4: (26.703,-110.596,-28.303)
P: (29.666,-104.848,-28.095)
C4': (26.220,-106.030,-29.433)
C2': (24.986,-107.797,-28.398)
C2: (25.622,-112.474,-27.913)
N1: (26.674,-113.086,-27.367)
N3: (25.529,-111.243,-28.410)
N6: (28.898,-113.017,-26.727)
N7: (28.879,-110.142,-27.803)
N9: (26.993,-109.310,-28.702)
O5': (28.157,-105.354,-28.174)
O3': (24.344,-105.494,-27.932)
Image (generated by PyMOL):