Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02534:02533
Extra
PDB:
ATOM 1 O3' A A2533 71.925 125.443 173.188 1.00 76.43 O
ATOM 2 P C A2534 72.955 124.326 173.696 1.00 76.24 P
ATOM 3 OP1 C A2534 72.154 123.281 174.383 1.00 76.68 O
ATOM 4 OP2 C A2534 74.062 124.997 174.420 1.00 77.77 O
ATOM 5 O5' C A2534 73.556 123.717 172.356 1.00 74.61 O
ATOM 6 C5' C A2534 72.785 122.830 171.531 1.00 71.57 C
ATOM 7 C4' C A2534 73.613 122.379 170.357 1.00 69.72 C
ATOM 8 O4' C A2534 73.908 123.520 169.514 1.00 69.37 O
ATOM 9 C3' C A2534 74.980 121.846 170.732 1.00 69.15 C
ATOM 10 O3' C A2534 74.912 120.493 171.138 1.00 68.97 O
ATOM 11 C2' C A2534 75.780 122.056 169.458 1.00 68.09 C
ATOM 12 O2' C A2534 75.511 121.071 168.487 1.00 68.45 O
ATOM 13 C1' C A2534 75.212 123.389 168.975 1.00 68.14 C
ATOM 14 N1 C A2534 76.009 124.561 169.372 1.00 68.23 N
ATOM 15 C2 C A2534 77.175 124.851 168.654 1.00 69.53 C
ATOM 16 O2 C A2534 77.499 124.114 167.713 1.00 69.99 O
ATOM 17 N3 C A2534 77.918 125.924 169.000 1.00 69.87 N
ATOM 18 C4 C A2534 77.538 126.697 170.016 1.00 70.06 C
ATOM 19 N4 C A2534 78.308 127.745 170.320 1.00 69.74 N
ATOM 20 C5 C A2534 76.352 126.430 170.767 1.00 70.25 C
ATOM 21 C6 C A2534 75.626 125.360 170.414 1.00 69.05 C
ATOM 22 P G A2535 75.803 120.002 172.373 1.00 68.49 P
ATOM 23 OP1 G A2535 75.533 118.560 172.592 1.00 66.75 O
ATOM 24 OP2 G A2535 75.597 120.966 173.482 1.00 67.19 O
ATOM 25 O5' G A2535 77.287 120.152 171.824 1.00 69.88 O
TER
ATOM 1 O3' U B2532 74.861 130.813 173.692 1.00 73.02 O
ATOM 2 P A B2533 75.425 129.312 173.712 1.00 72.42 P
ATOM 3 OP1 A B2533 75.509 128.901 175.129 1.00 73.19 O
ATOM 4 OP2 A B2533 76.642 129.241 172.860 1.00 71.20 O
ATOM 5 O5' A B2533 74.253 128.473 173.039 1.00 73.62 O
ATOM 6 C5' A B2533 72.925 128.481 173.609 1.00 74.19 C
ATOM 7 C4' A B2533 71.949 127.802 172.678 1.00 75.16 C
ATOM 8 O4' A B2533 71.840 128.565 171.452 1.00 75.70 O
ATOM 9 C3' A B2533 72.345 126.407 172.232 1.00 75.65 C
ATOM 10 O3' A B2533 71.925 125.443 173.188 1.00 76.43 O
ATOM 11 C2' A B2533 71.614 126.263 170.904 1.00 75.58 C
ATOM 12 O2' A B2533 70.248 125.938 171.055 1.00 75.24 O
ATOM 13 C1' A B2533 71.718 127.684 170.348 1.00 75.28 C
ATOM 14 N9 A B2533 72.869 127.893 169.472 1.00 74.80 N
ATOM 15 C8 A B2533 73.999 128.630 169.728 1.00 74.54 C
ATOM 16 N7 A B2533 74.859 128.639 168.742 1.00 74.81 N
ATOM 17 C5 A B2533 74.260 127.852 167.770 1.00 74.46 C
ATOM 18 C6 A B2533 74.669 127.465 166.486 1.00 73.39 C
ATOM 19 N6 A B2533 75.825 127.834 165.935 1.00 72.43 N
ATOM 20 N1 A B2533 73.840 126.676 165.776 1.00 74.02 N
ATOM 21 C2 A B2533 72.678 126.303 166.329 1.00 75.41 C
ATOM 22 N3 A B2533 72.181 126.600 167.528 1.00 75.34 N
ATOM 23 C4 A B2533 73.032 127.387 168.207 1.00 74.92 C
ATOM 24 P C B2534 72.955 124.326 173.696 1.00 76.24 P
ATOM 25 OP1 C B2534 72.154 123.281 174.383 1.00 76.68 O
ATOM 26 OP2 C B2534 74.062 124.997 174.420 1.00 77.77 O
ATOM 27 O5' C B2534 73.556 123.717 172.356 1.00 74.61 O
TER
ATOM 2 P C A2534 72.955 124.326 173.696 1.00 76.24 P
ATOM 3 OP1 C A2534 72.154 123.281 174.383 1.00 76.68 O
ATOM 4 OP2 C A2534 74.062 124.997 174.420 1.00 77.77 O
ATOM 5 O5' C A2534 73.556 123.717 172.356 1.00 74.61 O
ATOM 6 C5' C A2534 72.785 122.830 171.531 1.00 71.57 C
ATOM 7 C4' C A2534 73.613 122.379 170.357 1.00 69.72 C
ATOM 8 O4' C A2534 73.908 123.520 169.514 1.00 69.37 O
ATOM 9 C3' C A2534 74.980 121.846 170.732 1.00 69.15 C
ATOM 10 O3' C A2534 74.912 120.493 171.138 1.00 68.97 O
ATOM 11 C2' C A2534 75.780 122.056 169.458 1.00 68.09 C
ATOM 12 O2' C A2534 75.511 121.071 168.487 1.00 68.45 O
ATOM 13 C1' C A2534 75.212 123.389 168.975 1.00 68.14 C
ATOM 14 N1 C A2534 76.009 124.561 169.372 1.00 68.23 N
ATOM 15 C2 C A2534 77.175 124.851 168.654 1.00 69.53 C
ATOM 16 O2 C A2534 77.499 124.114 167.713 1.00 69.99 O
ATOM 17 N3 C A2534 77.918 125.924 169.000 1.00 69.87 N
ATOM 18 C4 C A2534 77.538 126.697 170.016 1.00 70.06 C
ATOM 19 N4 C A2534 78.308 127.745 170.320 1.00 69.74 N
ATOM 20 C5 C A2534 76.352 126.430 170.767 1.00 70.25 C
ATOM 21 C6 C A2534 75.626 125.360 170.414 1.00 69.05 C
ATOM 22 P G A2535 75.803 120.002 172.373 1.00 68.49 P
ATOM 23 OP1 G A2535 75.533 118.560 172.592 1.00 66.75 O
ATOM 24 OP2 G A2535 75.597 120.966 173.482 1.00 67.19 O
ATOM 25 O5' G A2535 77.287 120.152 171.824 1.00 69.88 O
TER
ATOM 1 O3' U B2532 74.861 130.813 173.692 1.00 73.02 O
ATOM 2 P A B2533 75.425 129.312 173.712 1.00 72.42 P
ATOM 3 OP1 A B2533 75.509 128.901 175.129 1.00 73.19 O
ATOM 4 OP2 A B2533 76.642 129.241 172.860 1.00 71.20 O
ATOM 5 O5' A B2533 74.253 128.473 173.039 1.00 73.62 O
ATOM 6 C5' A B2533 72.925 128.481 173.609 1.00 74.19 C
ATOM 7 C4' A B2533 71.949 127.802 172.678 1.00 75.16 C
ATOM 8 O4' A B2533 71.840 128.565 171.452 1.00 75.70 O
ATOM 9 C3' A B2533 72.345 126.407 172.232 1.00 75.65 C
ATOM 10 O3' A B2533 71.925 125.443 173.188 1.00 76.43 O
ATOM 11 C2' A B2533 71.614 126.263 170.904 1.00 75.58 C
ATOM 12 O2' A B2533 70.248 125.938 171.055 1.00 75.24 O
ATOM 13 C1' A B2533 71.718 127.684 170.348 1.00 75.28 C
ATOM 14 N9 A B2533 72.869 127.893 169.472 1.00 74.80 N
ATOM 15 C8 A B2533 73.999 128.630 169.728 1.00 74.54 C
ATOM 16 N7 A B2533 74.859 128.639 168.742 1.00 74.81 N
ATOM 17 C5 A B2533 74.260 127.852 167.770 1.00 74.46 C
ATOM 18 C6 A B2533 74.669 127.465 166.486 1.00 73.39 C
ATOM 19 N6 A B2533 75.825 127.834 165.935 1.00 72.43 N
ATOM 20 N1 A B2533 73.840 126.676 165.776 1.00 74.02 N
ATOM 21 C2 A B2533 72.678 126.303 166.329 1.00 75.41 C
ATOM 22 N3 A B2533 72.181 126.600 167.528 1.00 75.34 N
ATOM 23 C4 A B2533 73.032 127.387 168.207 1.00 74.92 C
ATOM 24 P C B2534 72.955 124.326 173.696 1.00 76.24 P
ATOM 25 OP1 C B2534 72.154 123.281 174.383 1.00 76.68 O
ATOM 26 OP2 C B2534 74.062 124.997 174.420 1.00 77.77 O
ATOM 27 O5' C B2534 73.556 123.717 172.356 1.00 74.61 O
TER
Atoms:
C2: (77.175,124.851,168.654)
OP1: (72.154,123.281,174.383)
OP2: (74.062,124.997,174.420)
C4: (77.538,126.697,170.016)
O5': (73.556,123.717,172.356)
C3': (74.980,121.846,170.732)
C1': (75.212,123.389,168.975)
O4': (73.908,123.520,169.514)
C5': (72.785,122.830,171.531)
P: (72.955,124.326,173.696)
O2: (77.499,124.114,167.713)
C4': (73.613,122.379,170.357)
C2': (75.780,122.056,169.458)
O2': (75.511,121.071,168.487)
N1: (76.009,124.561,169.372)
N3: (77.918,125.924,169.000)
N4: (78.308,127.745,170.320)
C6: (75.626,125.360,170.414)
C5: (76.352,126.430,170.767)
O3': (74.912,120.493,171.138)
OP1: (72.154,123.281,174.383)
OP2: (74.062,124.997,174.420)
C4: (77.538,126.697,170.016)
O5': (73.556,123.717,172.356)
C3': (74.980,121.846,170.732)
C1': (75.212,123.389,168.975)
O4': (73.908,123.520,169.514)
C5': (72.785,122.830,171.531)
P: (72.955,124.326,173.696)
O2: (77.499,124.114,167.713)
C4': (73.613,122.379,170.357)
C2': (75.780,122.056,169.458)
O2': (75.511,121.071,168.487)
N1: (76.009,124.561,169.372)
N3: (77.918,125.924,169.000)
N4: (78.308,127.745,170.320)
C6: (75.626,125.360,170.414)
C5: (76.352,126.430,170.767)
O3': (74.912,120.493,171.138)
OP1: (75.509,128.901,175.129)
OP2: (76.642,129.241,172.860)
C3': (72.345,126.407,172.232)
C1': (71.718,127.684,170.348)
C5': (72.925,128.481,173.609)
O4': (71.840,128.565,171.452)
C8: (73.999,128.630,169.728)
O2': (70.248,125.938,171.055)
C6: (74.669,127.465,166.486)
C5: (74.260,127.852,167.770)
C4: (73.032,127.387,168.207)
P: (75.425,129.312,173.712)
C4': (71.949,127.802,172.678)
C2': (71.614,126.263,170.904)
C2: (72.678,126.303,166.329)
N1: (73.840,126.676,165.776)
N3: (72.181,126.600,167.528)
N6: (75.825,127.834,165.935)
N7: (74.859,128.639,168.742)
N9: (72.869,127.893,169.472)
O5': (74.253,128.473,173.039)
O3': (71.925,125.443,173.188)
OP2: (76.642,129.241,172.860)
C3': (72.345,126.407,172.232)
C1': (71.718,127.684,170.348)
C5': (72.925,128.481,173.609)
O4': (71.840,128.565,171.452)
C8: (73.999,128.630,169.728)
O2': (70.248,125.938,171.055)
C6: (74.669,127.465,166.486)
C5: (74.260,127.852,167.770)
C4: (73.032,127.387,168.207)
P: (75.425,129.312,173.712)
C4': (71.949,127.802,172.678)
C2': (71.614,126.263,170.904)
C2: (72.678,126.303,166.329)
N1: (73.840,126.676,165.776)
N3: (72.181,126.600,167.528)
N6: (75.825,127.834,165.935)
N7: (74.859,128.639,168.742)
N9: (72.869,127.893,169.472)
O5': (74.253,128.473,173.039)
O3': (71.925,125.443,173.188)
Image (generated by PyMOL):