Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B21:B20
Extra
PDB:
ATOM 1 O3' A A 20 -18.058 18.898 2.731 1.00 48.82 O
ATOM 2 P C A 21 -18.051 20.465 3.056 1.00 53.52 P
ATOM 3 OP1 C A 21 -19.424 20.974 2.845 1.00 56.53 O
ATOM 4 OP2 C A 21 -16.919 21.076 2.323 1.00 53.50 O
ATOM 5 O5' C A 21 -17.740 20.513 4.624 1.00 51.15 O
ATOM 6 C5' C A 21 -18.674 20.004 5.568 1.00 50.17 C
ATOM 7 C4' C A 21 -17.995 19.778 6.906 1.00 47.15 C
ATOM 8 O4' C A 21 -16.961 18.776 6.750 1.00 49.05 O
ATOM 9 C3' C A 21 -17.258 20.985 7.471 1.00 52.64 C
ATOM 10 O3' C A 21 -18.138 21.834 8.196 1.00 50.35 O
ATOM 11 C2' C A 21 -16.246 20.315 8.392 1.00 50.33 C
ATOM 12 O2' C A 21 -16.823 19.894 9.612 1.00 50.51 O
ATOM 13 C1' C A 21 -15.843 19.103 7.557 1.00 52.40 C
ATOM 14 N1 C A 21 -14.664 19.354 6.675 1.00 49.96 N
ATOM 15 C2 C A 21 -13.372 19.278 7.208 1.00 47.55 C
ATOM 16 O2 C A 21 -13.227 19.004 8.405 1.00 46.97 O
ATOM 17 N3 C A 21 -12.311 19.510 6.394 1.00 44.01 N
ATOM 18 C4 C A 21 -12.509 19.803 5.107 1.00 47.67 C
ATOM 19 N4 C A 21 -11.435 20.023 4.342 1.00 47.35 N
ATOM 20 C5 C A 21 -13.818 19.886 4.547 1.00 47.73 C
ATOM 21 C6 C A 21 -14.855 19.657 5.359 1.00 48.83 C
ATOM 22 P A A 22 -17.791 23.392 8.305 1.00 58.48 P
ATOM 23 OP1 A A 22 -18.962 24.087 8.884 1.00 55.68 O
ATOM 24 OP2 A A 22 -17.251 23.826 6.998 1.00 56.26 O
ATOM 25 O5' A A 22 -16.612 23.414 9.386 1.00 52.81 O
TER
ATOM 1 O3' C B 19 -12.880 17.881 -0.473 1.00 45.28 O
ATOM 2 P A B 20 -13.318 19.158 0.387 1.00 49.81 P
ATOM 3 OP1 A B 20 -13.910 20.147 -0.542 1.00 43.62 O
ATOM 4 OP2 A B 20 -12.176 19.545 1.246 1.00 49.76 O
ATOM 5 O5' A B 20 -14.489 18.584 1.313 1.00 44.69 O
ATOM 6 C5' A B 20 -15.693 18.114 0.726 1.00 45.65 C
ATOM 7 C4' A B 20 -16.509 17.336 1.742 1.00 50.17 C
ATOM 8 O4' A B 20 -15.726 16.231 2.259 1.00 48.68 O
ATOM 9 C3' A B 20 -16.901 18.116 2.985 1.00 48.75 C
ATOM 10 O3' A B 20 -18.058 18.898 2.731 1.00 48.82 O
ATOM 11 C2' A B 20 -17.206 16.979 3.952 1.00 50.73 C
ATOM 12 O2' A B 20 -18.493 16.437 3.736 1.00 53.96 O
ATOM 13 C1' A B 20 -16.140 15.948 3.584 1.00 50.89 C
ATOM 14 N9 A B 20 -14.972 15.974 4.461 1.00 49.70 N
ATOM 15 C8 A B 20 -13.675 16.228 4.112 1.00 49.12 C
ATOM 16 N7 A B 20 -12.835 16.184 5.121 1.00 49.41 N
ATOM 17 C5 A B 20 -13.639 15.882 6.208 1.00 51.48 C
ATOM 18 C6 A B 20 -13.358 15.695 7.576 1.00 49.59 C
ATOM 19 N6 A B 20 -12.130 15.791 8.096 1.00 48.35 N
ATOM 20 N1 A B 20 -14.391 15.404 8.393 1.00 53.60 N
ATOM 21 C2 A B 20 -15.619 15.308 7.872 1.00 54.77 C
ATOM 22 N3 A B 20 -16.006 15.462 6.607 1.00 54.34 N
ATOM 23 C4 A B 20 -14.959 15.750 5.819 1.00 53.14 C
ATOM 24 P C B 21 -18.051 20.465 3.056 1.00 53.52 P
ATOM 25 OP1 C B 21 -19.424 20.974 2.845 1.00 56.53 O
ATOM 26 OP2 C B 21 -16.919 21.076 2.323 1.00 53.50 O
ATOM 27 O5' C B 21 -17.740 20.513 4.624 1.00 51.15 O
TER
ATOM 2 P C A 21 -18.051 20.465 3.056 1.00 53.52 P
ATOM 3 OP1 C A 21 -19.424 20.974 2.845 1.00 56.53 O
ATOM 4 OP2 C A 21 -16.919 21.076 2.323 1.00 53.50 O
ATOM 5 O5' C A 21 -17.740 20.513 4.624 1.00 51.15 O
ATOM 6 C5' C A 21 -18.674 20.004 5.568 1.00 50.17 C
ATOM 7 C4' C A 21 -17.995 19.778 6.906 1.00 47.15 C
ATOM 8 O4' C A 21 -16.961 18.776 6.750 1.00 49.05 O
ATOM 9 C3' C A 21 -17.258 20.985 7.471 1.00 52.64 C
ATOM 10 O3' C A 21 -18.138 21.834 8.196 1.00 50.35 O
ATOM 11 C2' C A 21 -16.246 20.315 8.392 1.00 50.33 C
ATOM 12 O2' C A 21 -16.823 19.894 9.612 1.00 50.51 O
ATOM 13 C1' C A 21 -15.843 19.103 7.557 1.00 52.40 C
ATOM 14 N1 C A 21 -14.664 19.354 6.675 1.00 49.96 N
ATOM 15 C2 C A 21 -13.372 19.278 7.208 1.00 47.55 C
ATOM 16 O2 C A 21 -13.227 19.004 8.405 1.00 46.97 O
ATOM 17 N3 C A 21 -12.311 19.510 6.394 1.00 44.01 N
ATOM 18 C4 C A 21 -12.509 19.803 5.107 1.00 47.67 C
ATOM 19 N4 C A 21 -11.435 20.023 4.342 1.00 47.35 N
ATOM 20 C5 C A 21 -13.818 19.886 4.547 1.00 47.73 C
ATOM 21 C6 C A 21 -14.855 19.657 5.359 1.00 48.83 C
ATOM 22 P A A 22 -17.791 23.392 8.305 1.00 58.48 P
ATOM 23 OP1 A A 22 -18.962 24.087 8.884 1.00 55.68 O
ATOM 24 OP2 A A 22 -17.251 23.826 6.998 1.00 56.26 O
ATOM 25 O5' A A 22 -16.612 23.414 9.386 1.00 52.81 O
TER
ATOM 1 O3' C B 19 -12.880 17.881 -0.473 1.00 45.28 O
ATOM 2 P A B 20 -13.318 19.158 0.387 1.00 49.81 P
ATOM 3 OP1 A B 20 -13.910 20.147 -0.542 1.00 43.62 O
ATOM 4 OP2 A B 20 -12.176 19.545 1.246 1.00 49.76 O
ATOM 5 O5' A B 20 -14.489 18.584 1.313 1.00 44.69 O
ATOM 6 C5' A B 20 -15.693 18.114 0.726 1.00 45.65 C
ATOM 7 C4' A B 20 -16.509 17.336 1.742 1.00 50.17 C
ATOM 8 O4' A B 20 -15.726 16.231 2.259 1.00 48.68 O
ATOM 9 C3' A B 20 -16.901 18.116 2.985 1.00 48.75 C
ATOM 10 O3' A B 20 -18.058 18.898 2.731 1.00 48.82 O
ATOM 11 C2' A B 20 -17.206 16.979 3.952 1.00 50.73 C
ATOM 12 O2' A B 20 -18.493 16.437 3.736 1.00 53.96 O
ATOM 13 C1' A B 20 -16.140 15.948 3.584 1.00 50.89 C
ATOM 14 N9 A B 20 -14.972 15.974 4.461 1.00 49.70 N
ATOM 15 C8 A B 20 -13.675 16.228 4.112 1.00 49.12 C
ATOM 16 N7 A B 20 -12.835 16.184 5.121 1.00 49.41 N
ATOM 17 C5 A B 20 -13.639 15.882 6.208 1.00 51.48 C
ATOM 18 C6 A B 20 -13.358 15.695 7.576 1.00 49.59 C
ATOM 19 N6 A B 20 -12.130 15.791 8.096 1.00 48.35 N
ATOM 20 N1 A B 20 -14.391 15.404 8.393 1.00 53.60 N
ATOM 21 C2 A B 20 -15.619 15.308 7.872 1.00 54.77 C
ATOM 22 N3 A B 20 -16.006 15.462 6.607 1.00 54.34 N
ATOM 23 C4 A B 20 -14.959 15.750 5.819 1.00 53.14 C
ATOM 24 P C B 21 -18.051 20.465 3.056 1.00 53.52 P
ATOM 25 OP1 C B 21 -19.424 20.974 2.845 1.00 56.53 O
ATOM 26 OP2 C B 21 -16.919 21.076 2.323 1.00 53.50 O
ATOM 27 O5' C B 21 -17.740 20.513 4.624 1.00 51.15 O
TER
Atoms:
C2: (-13.372,19.278,7.208)
OP1: (-19.424,20.974,2.845)
OP2: (-16.919,21.076,2.323)
C4: (-12.509,19.803,5.107)
O5': (-17.740,20.513,4.624)
C3': (-17.258,20.985,7.471)
C1': (-15.843,19.103,7.557)
O4': (-16.961,18.776,6.750)
C5': (-18.674,20.004,5.568)
P: (-18.051,20.465,3.056)
O2: (-13.227,19.004,8.405)
C4': (-17.995,19.778,6.906)
C2': (-16.246,20.315,8.392)
O2': (-16.823,19.894,9.612)
N1: (-14.664,19.354,6.675)
N3: (-12.311,19.510,6.394)
N4: (-11.435,20.023,4.342)
C6: (-14.855,19.657,5.359)
C5: (-13.818,19.886,4.547)
O3': (-18.138,21.834,8.196)
OP1: (-19.424,20.974,2.845)
OP2: (-16.919,21.076,2.323)
C4: (-12.509,19.803,5.107)
O5': (-17.740,20.513,4.624)
C3': (-17.258,20.985,7.471)
C1': (-15.843,19.103,7.557)
O4': (-16.961,18.776,6.750)
C5': (-18.674,20.004,5.568)
P: (-18.051,20.465,3.056)
O2: (-13.227,19.004,8.405)
C4': (-17.995,19.778,6.906)
C2': (-16.246,20.315,8.392)
O2': (-16.823,19.894,9.612)
N1: (-14.664,19.354,6.675)
N3: (-12.311,19.510,6.394)
N4: (-11.435,20.023,4.342)
C6: (-14.855,19.657,5.359)
C5: (-13.818,19.886,4.547)
O3': (-18.138,21.834,8.196)
OP1: (-13.910,20.147,-0.542)
OP2: (-12.176,19.545,1.246)
C3': (-16.901,18.116,2.985)
C1': (-16.140,15.948,3.584)
C5': (-15.693,18.114,0.726)
O4': (-15.726,16.231,2.259)
C8: (-13.675,16.228,4.112)
O2': (-18.493,16.437,3.736)
C6: (-13.358,15.695,7.576)
C5: (-13.639,15.882,6.208)
C4: (-14.959,15.750,5.819)
P: (-13.318,19.158,0.387)
C4': (-16.509,17.336,1.742)
C2': (-17.206,16.979,3.952)
C2: (-15.619,15.308,7.872)
N1: (-14.391,15.404,8.393)
N3: (-16.006,15.462,6.607)
N6: (-12.130,15.791,8.096)
N7: (-12.835,16.184,5.121)
N9: (-14.972,15.974,4.461)
O5': (-14.489,18.584,1.313)
O3': (-18.058,18.898,2.731)
OP2: (-12.176,19.545,1.246)
C3': (-16.901,18.116,2.985)
C1': (-16.140,15.948,3.584)
C5': (-15.693,18.114,0.726)
O4': (-15.726,16.231,2.259)
C8: (-13.675,16.228,4.112)
O2': (-18.493,16.437,3.736)
C6: (-13.358,15.695,7.576)
C5: (-13.639,15.882,6.208)
C4: (-14.959,15.750,5.819)
P: (-13.318,19.158,0.387)
C4': (-16.509,17.336,1.742)
C2': (-17.206,16.979,3.952)
C2: (-15.619,15.308,7.872)
N1: (-14.391,15.404,8.393)
N3: (-16.006,15.462,6.607)
N6: (-12.130,15.791,8.096)
N7: (-12.835,16.184,5.121)
N9: (-14.972,15.974,4.461)
O5': (-14.489,18.584,1.313)
O3': (-18.058,18.898,2.731)
Image (generated by PyMOL):