Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIX:A129:A128
Extra
PDB:
ATOM 1 O3' A A 128 26.703 40.146 24.900 1.00 35.02 O
ATOM 2 P C A 129 27.243 38.831 24.148 1.00 35.79 P
ATOM 3 OP1 C A 129 28.164 38.117 25.060 1.00 35.71 O
ATOM 4 OP2 C A 129 27.708 39.211 22.796 1.00 36.48 O
ATOM 5 O5' C A 129 25.945 37.925 23.956 1.00 35.30 O
ATOM 6 C5' C A 129 25.312 37.335 25.081 1.00 34.10 C
ATOM 7 C4' C A 129 23.927 36.867 24.704 1.00 32.63 C
ATOM 8 O4' C A 129 23.129 38.018 24.327 1.00 32.09 O
ATOM 9 C3' C A 129 23.906 35.992 23.469 1.00 32.45 C
ATOM 10 O3' C A 129 24.196 34.650 23.790 1.00 33.34 O
ATOM 11 C2' C A 129 22.479 36.199 22.976 1.00 32.21 C
ATOM 12 O2' C A 129 21.509 35.443 23.673 1.00 32.98 O
ATOM 13 C1' C A 129 22.297 37.693 23.227 1.00 31.08 C
ATOM 14 N1 C A 129 22.634 38.505 22.004 1.00 29.76 N
ATOM 15 C2 C A 129 21.729 38.508 20.942 1.00 29.89 C
ATOM 16 O2 C A 129 20.685 37.860 21.046 1.00 30.76 O
ATOM 17 N3 C A 129 22.012 39.223 19.826 1.00 30.26 N
ATOM 18 C4 C A 129 23.147 39.913 19.739 1.00 29.81 C
ATOM 19 N4 C A 129 23.363 40.598 18.615 1.00 30.09 N
ATOM 20 C5 C A 129 24.094 39.925 20.803 1.00 29.57 C
ATOM 21 C6 C A 129 23.796 39.215 21.899 1.00 29.50 C
ATOM 22 P C A 130 24.920 33.737 22.690 1.00 33.82 P
ATOM 23 OP1 C A 130 25.421 32.498 23.336 1.00 32.36 O
ATOM 24 OP2 C A 130 25.831 34.613 21.907 1.00 33.23 O
ATOM 25 O5' C A 130 23.712 33.375 21.712 1.00 33.16 O
TER
ATOM 1 O3' U B 127 27.477 44.432 20.360 1.00 36.90 O
ATOM 2 P A B 128 26.993 42.912 20.196 1.00 37.31 P
ATOM 3 OP1 A B 128 28.207 42.092 19.974 1.00 37.34 O
ATOM 4 OP2 A B 128 25.881 42.879 19.215 1.00 36.36 O
ATOM 5 O5' A B 128 26.402 42.541 21.644 1.00 37.44 O
ATOM 6 C5' A B 128 27.221 42.543 22.830 1.00 36.27 C
ATOM 7 C4' A B 128 26.372 42.410 24.083 1.00 35.72 C
ATOM 8 O4' A B 128 25.219 43.308 24.043 1.00 35.27 O
ATOM 9 C3' A B 128 25.772 41.027 24.286 1.00 35.59 C
ATOM 10 O3' A B 128 26.703 40.146 24.900 1.00 35.02 O
ATOM 11 C2' A B 128 24.587 41.357 25.193 1.00 36.14 C
ATOM 12 O2' A B 128 24.948 41.541 26.549 1.00 38.04 O
ATOM 13 C1' A B 128 24.073 42.675 24.600 1.00 34.71 C
ATOM 14 N9 A B 128 23.059 42.446 23.563 1.00 33.62 N
ATOM 15 C8 A B 128 23.098 42.885 22.272 1.00 33.32 C
ATOM 16 N7 A B 128 22.068 42.528 21.545 1.00 33.16 N
ATOM 17 C5 A B 128 21.291 41.790 22.412 1.00 32.77 C
ATOM 18 C6 A B 128 20.062 41.116 22.246 1.00 32.31 C
ATOM 19 N6 A B 128 19.377 41.094 21.098 1.00 32.57 N
ATOM 20 N1 A B 128 19.552 40.467 23.314 1.00 32.15 N
ATOM 21 C2 A B 128 20.228 40.485 24.468 1.00 32.19 C
ATOM 22 N3 A B 128 21.391 41.080 24.736 1.00 32.98 N
ATOM 23 C4 A B 128 21.883 41.724 23.660 1.00 33.03 C
ATOM 24 P C B 129 27.243 38.831 24.148 1.00 35.79 P
ATOM 25 OP1 C B 129 28.164 38.117 25.060 1.00 35.71 O
ATOM 26 OP2 C B 129 27.708 39.211 22.796 1.00 36.48 O
ATOM 27 O5' C B 129 25.945 37.925 23.956 1.00 35.30 O
TER
ATOM 2 P C A 129 27.243 38.831 24.148 1.00 35.79 P
ATOM 3 OP1 C A 129 28.164 38.117 25.060 1.00 35.71 O
ATOM 4 OP2 C A 129 27.708 39.211 22.796 1.00 36.48 O
ATOM 5 O5' C A 129 25.945 37.925 23.956 1.00 35.30 O
ATOM 6 C5' C A 129 25.312 37.335 25.081 1.00 34.10 C
ATOM 7 C4' C A 129 23.927 36.867 24.704 1.00 32.63 C
ATOM 8 O4' C A 129 23.129 38.018 24.327 1.00 32.09 O
ATOM 9 C3' C A 129 23.906 35.992 23.469 1.00 32.45 C
ATOM 10 O3' C A 129 24.196 34.650 23.790 1.00 33.34 O
ATOM 11 C2' C A 129 22.479 36.199 22.976 1.00 32.21 C
ATOM 12 O2' C A 129 21.509 35.443 23.673 1.00 32.98 O
ATOM 13 C1' C A 129 22.297 37.693 23.227 1.00 31.08 C
ATOM 14 N1 C A 129 22.634 38.505 22.004 1.00 29.76 N
ATOM 15 C2 C A 129 21.729 38.508 20.942 1.00 29.89 C
ATOM 16 O2 C A 129 20.685 37.860 21.046 1.00 30.76 O
ATOM 17 N3 C A 129 22.012 39.223 19.826 1.00 30.26 N
ATOM 18 C4 C A 129 23.147 39.913 19.739 1.00 29.81 C
ATOM 19 N4 C A 129 23.363 40.598 18.615 1.00 30.09 N
ATOM 20 C5 C A 129 24.094 39.925 20.803 1.00 29.57 C
ATOM 21 C6 C A 129 23.796 39.215 21.899 1.00 29.50 C
ATOM 22 P C A 130 24.920 33.737 22.690 1.00 33.82 P
ATOM 23 OP1 C A 130 25.421 32.498 23.336 1.00 32.36 O
ATOM 24 OP2 C A 130 25.831 34.613 21.907 1.00 33.23 O
ATOM 25 O5' C A 130 23.712 33.375 21.712 1.00 33.16 O
TER
ATOM 1 O3' U B 127 27.477 44.432 20.360 1.00 36.90 O
ATOM 2 P A B 128 26.993 42.912 20.196 1.00 37.31 P
ATOM 3 OP1 A B 128 28.207 42.092 19.974 1.00 37.34 O
ATOM 4 OP2 A B 128 25.881 42.879 19.215 1.00 36.36 O
ATOM 5 O5' A B 128 26.402 42.541 21.644 1.00 37.44 O
ATOM 6 C5' A B 128 27.221 42.543 22.830 1.00 36.27 C
ATOM 7 C4' A B 128 26.372 42.410 24.083 1.00 35.72 C
ATOM 8 O4' A B 128 25.219 43.308 24.043 1.00 35.27 O
ATOM 9 C3' A B 128 25.772 41.027 24.286 1.00 35.59 C
ATOM 10 O3' A B 128 26.703 40.146 24.900 1.00 35.02 O
ATOM 11 C2' A B 128 24.587 41.357 25.193 1.00 36.14 C
ATOM 12 O2' A B 128 24.948 41.541 26.549 1.00 38.04 O
ATOM 13 C1' A B 128 24.073 42.675 24.600 1.00 34.71 C
ATOM 14 N9 A B 128 23.059 42.446 23.563 1.00 33.62 N
ATOM 15 C8 A B 128 23.098 42.885 22.272 1.00 33.32 C
ATOM 16 N7 A B 128 22.068 42.528 21.545 1.00 33.16 N
ATOM 17 C5 A B 128 21.291 41.790 22.412 1.00 32.77 C
ATOM 18 C6 A B 128 20.062 41.116 22.246 1.00 32.31 C
ATOM 19 N6 A B 128 19.377 41.094 21.098 1.00 32.57 N
ATOM 20 N1 A B 128 19.552 40.467 23.314 1.00 32.15 N
ATOM 21 C2 A B 128 20.228 40.485 24.468 1.00 32.19 C
ATOM 22 N3 A B 128 21.391 41.080 24.736 1.00 32.98 N
ATOM 23 C4 A B 128 21.883 41.724 23.660 1.00 33.03 C
ATOM 24 P C B 129 27.243 38.831 24.148 1.00 35.79 P
ATOM 25 OP1 C B 129 28.164 38.117 25.060 1.00 35.71 O
ATOM 26 OP2 C B 129 27.708 39.211 22.796 1.00 36.48 O
ATOM 27 O5' C B 129 25.945 37.925 23.956 1.00 35.30 O
TER
Atoms:
C2: (21.729,38.508,20.942)
OP1: (28.164,38.117,25.060)
OP2: (27.708,39.211,22.796)
C4: (23.147,39.913,19.739)
O5': (25.945,37.925,23.956)
C3': (23.906,35.992,23.469)
C1': (22.297,37.693,23.227)
O4': (23.129,38.018,24.327)
C5': (25.312,37.335,25.081)
P: (27.243,38.831,24.148)
O2: (20.685,37.860,21.046)
C4': (23.927,36.867,24.704)
C2': (22.479,36.199,22.976)
O2': (21.509,35.443,23.673)
N1: (22.634,38.505,22.004)
N3: (22.012,39.223,19.826)
N4: (23.363,40.598,18.615)
C6: (23.796,39.215,21.899)
C5: (24.094,39.925,20.803)
O3': (24.196,34.650,23.790)
OP1: (28.164,38.117,25.060)
OP2: (27.708,39.211,22.796)
C4: (23.147,39.913,19.739)
O5': (25.945,37.925,23.956)
C3': (23.906,35.992,23.469)
C1': (22.297,37.693,23.227)
O4': (23.129,38.018,24.327)
C5': (25.312,37.335,25.081)
P: (27.243,38.831,24.148)
O2: (20.685,37.860,21.046)
C4': (23.927,36.867,24.704)
C2': (22.479,36.199,22.976)
O2': (21.509,35.443,23.673)
N1: (22.634,38.505,22.004)
N3: (22.012,39.223,19.826)
N4: (23.363,40.598,18.615)
C6: (23.796,39.215,21.899)
C5: (24.094,39.925,20.803)
O3': (24.196,34.650,23.790)
OP1: (28.207,42.092,19.974)
OP2: (25.881,42.879,19.215)
C3': (25.772,41.027,24.286)
C1': (24.073,42.675,24.600)
C5': (27.221,42.543,22.830)
O4': (25.219,43.308,24.043)
C8: (23.098,42.885,22.272)
O2': (24.948,41.541,26.549)
C6: (20.062,41.116,22.246)
C5: (21.291,41.790,22.412)
C4: (21.883,41.724,23.660)
P: (26.993,42.912,20.196)
C4': (26.372,42.410,24.083)
C2': (24.587,41.357,25.193)
C2: (20.228,40.485,24.468)
N1: (19.552,40.467,23.314)
N3: (21.391,41.080,24.736)
N6: (19.377,41.094,21.098)
N7: (22.068,42.528,21.545)
N9: (23.059,42.446,23.563)
O5': (26.402,42.541,21.644)
O3': (26.703,40.146,24.900)
OP2: (25.881,42.879,19.215)
C3': (25.772,41.027,24.286)
C1': (24.073,42.675,24.600)
C5': (27.221,42.543,22.830)
O4': (25.219,43.308,24.043)
C8: (23.098,42.885,22.272)
O2': (24.948,41.541,26.549)
C6: (20.062,41.116,22.246)
C5: (21.291,41.790,22.412)
C4: (21.883,41.724,23.660)
P: (26.993,42.912,20.196)
C4': (26.372,42.410,24.083)
C2': (24.587,41.357,25.193)
C2: (20.228,40.485,24.468)
N1: (19.552,40.467,23.314)
N3: (21.391,41.080,24.736)
N6: (19.377,41.094,21.098)
N7: (22.068,42.528,21.545)
N9: (23.059,42.446,23.563)
O5': (26.402,42.541,21.644)
O3': (26.703,40.146,24.900)
Image (generated by PyMOL):