Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OIJ:C9:C8
Extra
PDB:
ATOM 1 O3' A A 8 10.122 -16.358 7.808 1.00 53.98 O
ATOM 2 P C A 9 11.079 -17.590 7.401 1.00 85.04 P
ATOM 3 OP1 C A 9 10.631 -18.073 6.073 1.00 84.69 O
ATOM 4 OP2 C A 9 11.080 -18.540 8.543 1.00 84.32 O
ATOM 5 O5' C A 9 12.516 -16.906 7.291 1.00 75.65 O
ATOM 6 C5' C A 9 12.821 -15.738 6.538 1.00 63.79 C
ATOM 7 C4' C A 9 14.274 -15.391 6.699 1.00 55.79 C
ATOM 8 O4' C A 9 14.484 -14.807 8.012 1.00 67.19 O
ATOM 9 C3' C A 9 15.192 -16.600 6.658 1.00 47.57 C
ATOM 10 O3' C A 9 15.555 -16.934 5.333 1.00 48.71 O
ATOM 11 C2' C A 9 16.358 -16.207 7.562 1.00 51.04 C
ATOM 12 O2' C A 9 17.296 -15.383 6.881 1.00 45.11 O
ATOM 13 C1' C A 9 15.656 -15.336 8.604 1.00 59.87 C
ATOM 14 N1 C A 9 15.336 -15.977 9.919 1.00 56.10 N
ATOM 15 C2 C A 9 16.310 -15.885 10.912 1.00 54.76 C
ATOM 16 O2 C A 9 17.366 -15.321 10.634 1.00 59.28 O
ATOM 17 N3 C A 9 16.101 -16.413 12.136 1.00 52.73 N
ATOM 18 C4 C A 9 14.945 -17.019 12.410 1.00 49.71 C
ATOM 19 N4 C A 9 14.817 -17.510 13.650 1.00 41.04 N
ATOM 20 C5 C A 9 13.907 -17.132 11.424 1.00 45.30 C
ATOM 21 C6 C A 9 14.144 -16.602 10.212 1.00 48.07 C
ATOM 22 P G A 10 15.902 -18.441 4.911 1.00 84.58 P
ATOM 23 OP1 G A 10 16.564 -18.308 3.584 1.00 66.15 O
ATOM 24 OP2 G A 10 14.662 -19.241 5.101 1.00 85.00 O
ATOM 25 O5' G A 10 16.991 -18.882 5.970 1.00 41.80 O
TER
ATOM 1 O3' A B 7 9.697 -15.988 14.073 1.00 44.15 O
ATOM 2 P A B 8 10.210 -17.283 13.303 1.00 72.11 P
ATOM 3 OP1 A B 8 9.217 -18.370 13.529 1.00 45.44 O
ATOM 4 OP2 A B 8 11.595 -17.410 13.813 1.00 63.01 O
ATOM 5 O5' A B 8 10.287 -16.882 11.757 1.00 56.90 O
ATOM 6 C5' A B 8 9.179 -16.806 10.870 1.00 55.27 C
ATOM 7 C4' A B 8 9.289 -15.588 9.987 1.00 66.63 C
ATOM 8 O4' A B 8 9.586 -14.427 10.810 1.00 72.42 O
ATOM 9 C3' A B 8 10.425 -15.606 8.977 1.00 64.06 C
ATOM 10 O3' A B 8 10.122 -16.358 7.808 1.00 53.98 O
ATOM 11 C2' A B 8 10.716 -14.118 8.750 1.00 61.66 C
ATOM 12 O2' A B 8 9.763 -13.498 7.901 1.00 62.02 O
ATOM 13 C1' A B 8 10.470 -13.547 10.139 1.00 59.62 C
ATOM 14 N9 A B 8 11.722 -13.387 10.905 1.00 54.83 N
ATOM 15 C8 A B 8 12.648 -14.336 11.261 1.00 48.73 C
ATOM 16 N7 A B 8 13.659 -13.842 11.945 1.00 47.94 N
ATOM 17 C5 A B 8 13.394 -12.482 12.054 1.00 54.13 C
ATOM 18 C6 A B 8 14.077 -11.388 12.658 1.00 58.16 C
ATOM 19 N6 A B 8 15.237 -11.465 13.327 1.00 56.60 N
ATOM 20 N1 A B 8 13.513 -10.160 12.560 1.00 53.79 N
ATOM 21 C2 A B 8 12.350 -10.045 11.909 1.00 52.22 C
ATOM 22 N3 A B 8 11.622 -10.986 11.309 1.00 53.59 N
ATOM 23 C4 A B 8 12.198 -12.196 11.415 1.00 55.36 C
ATOM 24 P C B 9 11.079 -17.590 7.401 1.00 85.04 P
ATOM 25 OP1 C B 9 10.631 -18.073 6.073 1.00 84.69 O
ATOM 26 OP2 C B 9 11.080 -18.540 8.543 1.00 84.32 O
ATOM 27 O5' C B 9 12.516 -16.906 7.291 1.00 75.65 O
TER
ATOM 2 P C A 9 11.079 -17.590 7.401 1.00 85.04 P
ATOM 3 OP1 C A 9 10.631 -18.073 6.073 1.00 84.69 O
ATOM 4 OP2 C A 9 11.080 -18.540 8.543 1.00 84.32 O
ATOM 5 O5' C A 9 12.516 -16.906 7.291 1.00 75.65 O
ATOM 6 C5' C A 9 12.821 -15.738 6.538 1.00 63.79 C
ATOM 7 C4' C A 9 14.274 -15.391 6.699 1.00 55.79 C
ATOM 8 O4' C A 9 14.484 -14.807 8.012 1.00 67.19 O
ATOM 9 C3' C A 9 15.192 -16.600 6.658 1.00 47.57 C
ATOM 10 O3' C A 9 15.555 -16.934 5.333 1.00 48.71 O
ATOM 11 C2' C A 9 16.358 -16.207 7.562 1.00 51.04 C
ATOM 12 O2' C A 9 17.296 -15.383 6.881 1.00 45.11 O
ATOM 13 C1' C A 9 15.656 -15.336 8.604 1.00 59.87 C
ATOM 14 N1 C A 9 15.336 -15.977 9.919 1.00 56.10 N
ATOM 15 C2 C A 9 16.310 -15.885 10.912 1.00 54.76 C
ATOM 16 O2 C A 9 17.366 -15.321 10.634 1.00 59.28 O
ATOM 17 N3 C A 9 16.101 -16.413 12.136 1.00 52.73 N
ATOM 18 C4 C A 9 14.945 -17.019 12.410 1.00 49.71 C
ATOM 19 N4 C A 9 14.817 -17.510 13.650 1.00 41.04 N
ATOM 20 C5 C A 9 13.907 -17.132 11.424 1.00 45.30 C
ATOM 21 C6 C A 9 14.144 -16.602 10.212 1.00 48.07 C
ATOM 22 P G A 10 15.902 -18.441 4.911 1.00 84.58 P
ATOM 23 OP1 G A 10 16.564 -18.308 3.584 1.00 66.15 O
ATOM 24 OP2 G A 10 14.662 -19.241 5.101 1.00 85.00 O
ATOM 25 O5' G A 10 16.991 -18.882 5.970 1.00 41.80 O
TER
ATOM 1 O3' A B 7 9.697 -15.988 14.073 1.00 44.15 O
ATOM 2 P A B 8 10.210 -17.283 13.303 1.00 72.11 P
ATOM 3 OP1 A B 8 9.217 -18.370 13.529 1.00 45.44 O
ATOM 4 OP2 A B 8 11.595 -17.410 13.813 1.00 63.01 O
ATOM 5 O5' A B 8 10.287 -16.882 11.757 1.00 56.90 O
ATOM 6 C5' A B 8 9.179 -16.806 10.870 1.00 55.27 C
ATOM 7 C4' A B 8 9.289 -15.588 9.987 1.00 66.63 C
ATOM 8 O4' A B 8 9.586 -14.427 10.810 1.00 72.42 O
ATOM 9 C3' A B 8 10.425 -15.606 8.977 1.00 64.06 C
ATOM 10 O3' A B 8 10.122 -16.358 7.808 1.00 53.98 O
ATOM 11 C2' A B 8 10.716 -14.118 8.750 1.00 61.66 C
ATOM 12 O2' A B 8 9.763 -13.498 7.901 1.00 62.02 O
ATOM 13 C1' A B 8 10.470 -13.547 10.139 1.00 59.62 C
ATOM 14 N9 A B 8 11.722 -13.387 10.905 1.00 54.83 N
ATOM 15 C8 A B 8 12.648 -14.336 11.261 1.00 48.73 C
ATOM 16 N7 A B 8 13.659 -13.842 11.945 1.00 47.94 N
ATOM 17 C5 A B 8 13.394 -12.482 12.054 1.00 54.13 C
ATOM 18 C6 A B 8 14.077 -11.388 12.658 1.00 58.16 C
ATOM 19 N6 A B 8 15.237 -11.465 13.327 1.00 56.60 N
ATOM 20 N1 A B 8 13.513 -10.160 12.560 1.00 53.79 N
ATOM 21 C2 A B 8 12.350 -10.045 11.909 1.00 52.22 C
ATOM 22 N3 A B 8 11.622 -10.986 11.309 1.00 53.59 N
ATOM 23 C4 A B 8 12.198 -12.196 11.415 1.00 55.36 C
ATOM 24 P C B 9 11.079 -17.590 7.401 1.00 85.04 P
ATOM 25 OP1 C B 9 10.631 -18.073 6.073 1.00 84.69 O
ATOM 26 OP2 C B 9 11.080 -18.540 8.543 1.00 84.32 O
ATOM 27 O5' C B 9 12.516 -16.906 7.291 1.00 75.65 O
TER
Atoms:
C2: (16.310,-15.885,10.912)
OP1: (10.631,-18.073,6.073)
OP2: (11.080,-18.540,8.543)
C4: (14.945,-17.019,12.410)
O5': (12.516,-16.906,7.291)
C3': (15.192,-16.600,6.658)
C1': (15.656,-15.336,8.604)
O4': (14.484,-14.807,8.012)
C5': (12.821,-15.738,6.538)
P: (11.079,-17.590,7.401)
O2: (17.366,-15.321,10.634)
C4': (14.274,-15.391,6.699)
C2': (16.358,-16.207,7.562)
O2': (17.296,-15.383,6.881)
N1: (15.336,-15.977,9.919)
N3: (16.101,-16.413,12.136)
N4: (14.817,-17.510,13.650)
C6: (14.144,-16.602,10.212)
C5: (13.907,-17.132,11.424)
O3': (15.555,-16.934,5.333)
OP1: (10.631,-18.073,6.073)
OP2: (11.080,-18.540,8.543)
C4: (14.945,-17.019,12.410)
O5': (12.516,-16.906,7.291)
C3': (15.192,-16.600,6.658)
C1': (15.656,-15.336,8.604)
O4': (14.484,-14.807,8.012)
C5': (12.821,-15.738,6.538)
P: (11.079,-17.590,7.401)
O2: (17.366,-15.321,10.634)
C4': (14.274,-15.391,6.699)
C2': (16.358,-16.207,7.562)
O2': (17.296,-15.383,6.881)
N1: (15.336,-15.977,9.919)
N3: (16.101,-16.413,12.136)
N4: (14.817,-17.510,13.650)
C6: (14.144,-16.602,10.212)
C5: (13.907,-17.132,11.424)
O3': (15.555,-16.934,5.333)
OP1: (9.217,-18.370,13.529)
OP2: (11.595,-17.410,13.813)
C3': (10.425,-15.606,8.977)
C1': (10.470,-13.547,10.139)
C5': (9.179,-16.806,10.870)
O4': (9.586,-14.427,10.810)
C8: (12.648,-14.336,11.261)
O2': (9.763,-13.498,7.901)
C6: (14.077,-11.388,12.658)
C5: (13.394,-12.482,12.054)
C4: (12.198,-12.196,11.415)
P: (10.210,-17.283,13.303)
C4': (9.289,-15.588,9.987)
C2': (10.716,-14.118,8.750)
C2: (12.350,-10.045,11.909)
N1: (13.513,-10.160,12.560)
N3: (11.622,-10.986,11.309)
N6: (15.237,-11.465,13.327)
N7: (13.659,-13.842,11.945)
N9: (11.722,-13.387,10.905)
O5': (10.287,-16.882,11.757)
O3': (10.122,-16.358,7.808)
OP2: (11.595,-17.410,13.813)
C3': (10.425,-15.606,8.977)
C1': (10.470,-13.547,10.139)
C5': (9.179,-16.806,10.870)
O4': (9.586,-14.427,10.810)
C8: (12.648,-14.336,11.261)
O2': (9.763,-13.498,7.901)
C6: (14.077,-11.388,12.658)
C5: (13.394,-12.482,12.054)
C4: (12.198,-12.196,11.415)
P: (10.210,-17.283,13.303)
C4': (9.289,-15.588,9.987)
C2': (10.716,-14.118,8.750)
C2: (12.350,-10.045,11.909)
N1: (13.513,-10.160,12.560)
N3: (11.622,-10.986,11.309)
N6: (15.237,-11.465,13.327)
N7: (13.659,-13.842,11.945)
N9: (11.722,-13.387,10.905)
O5': (10.287,-16.882,11.757)
O3': (10.122,-16.358,7.808)
Image (generated by PyMOL):