Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A486:A485
Extra
PDB:
ATOM 1 O3' A A 485 -79.831 21.943 -92.621 1.00 34.89 O
ATOM 2 P C A 486 -81.314 22.465 -92.929 1.00 34.11 P
ATOM 3 OP1 C A 486 -81.710 23.365 -91.811 1.00 34.11 O
ATOM 4 OP2 C A 486 -82.148 21.256 -93.212 1.00 34.11 O
ATOM 5 O5' C A 486 -81.096 23.323 -94.261 1.00 34.11 O
ATOM 6 C5' C A 486 -80.290 24.509 -94.254 1.00 34.11 C
ATOM 7 C4' C A 486 -80.119 25.089 -95.651 1.00 34.11 C
ATOM 8 O4' C A 486 -79.301 24.191 -96.469 1.00 34.11 O
ATOM 9 C3' C A 486 -81.396 25.269 -96.476 1.00 34.11 C
ATOM 10 O3' C A 486 -82.120 26.458 -96.175 1.00 34.11 O
ATOM 11 C2' C A 486 -80.865 25.204 -97.903 1.00 34.11 C
ATOM 12 O2' C A 486 -80.159 26.396 -98.233 1.00 34.11 O
ATOM 13 C1' C A 486 -79.860 24.073 -97.764 1.00 34.11 C
ATOM 14 N1 C A 486 -80.505 22.742 -97.856 1.00 33.04 N
ATOM 15 C2 C A 486 -80.877 22.150 -99.060 1.00 33.04 C
ATOM 16 O2 C A 486 -80.693 22.757-100.109 1.00 33.04 O
ATOM 17 N3 C A 486 -81.450 20.922 -99.072 1.00 33.04 N
ATOM 18 C4 C A 486 -81.659 20.264 -97.929 1.00 33.04 C
ATOM 19 N4 C A 486 -82.227 19.053 -97.964 1.00 33.04 N
ATOM 20 C5 C A 486 -81.282 20.844 -96.685 1.00 33.04 C
ATOM 21 C6 C A 486 -80.721 22.058 -96.701 1.00 33.04 C
ATOM 22 P C A 487 -83.730 26.476 -96.330 1.00 57.73 P
ATOM 23 OP1 C A 487 -84.195 27.819 -95.892 1.00 57.73 O
ATOM 24 OP2 C A 487 -84.261 25.267 -95.631 1.00 57.73 O
ATOM 25 O5' C A 487 -83.939 26.315 -97.904 1.00 57.73 O
TER
ATOM 1 O3' U B 484 -79.647 16.019 -93.896 1.00 45.72 O
ATOM 2 P A B 485 -80.883 16.977 -94.185 1.00 34.89 P
ATOM 3 OP1 A B 485 -81.918 16.679 -93.163 1.00 34.89 O
ATOM 4 OP2 A B 485 -81.222 16.806 -95.627 1.00 34.89 O
ATOM 5 O5' A B 485 -80.268 18.429 -93.939 1.00 34.89 O
ATOM 6 C5' A B 485 -79.554 18.726 -92.755 1.00 34.89 C
ATOM 7 C4' A B 485 -78.583 19.852 -92.974 1.00 34.89 C
ATOM 8 O4' A B 485 -77.574 19.452 -93.937 1.00 34.89 O
ATOM 9 C3' A B 485 -79.165 21.131 -93.568 1.00 34.89 C
ATOM 10 O3' A B 485 -79.831 21.943 -92.621 1.00 34.89 O
ATOM 11 C2' A B 485 -77.947 21.793 -94.187 1.00 34.89 C
ATOM 12 O2' A B 485 -77.153 22.437 -93.199 1.00 34.89 O
ATOM 13 C1' A B 485 -77.197 20.571 -94.727 1.00 34.89 C
ATOM 14 N9 A B 485 -77.572 20.300 -96.125 1.00 34.41 N
ATOM 15 C8 A B 485 -78.335 19.274 -96.643 1.00 34.41 C
ATOM 16 N7 A B 485 -78.510 19.368 -97.940 1.00 34.41 N
ATOM 17 C5 A B 485 -77.829 20.533 -98.279 1.00 34.41 C
ATOM 18 C6 A B 485 -77.620 21.190 -99.497 1.00 34.41 C
ATOM 19 N6 A B 485 -78.114 20.721-100.647 1.00 34.41 N
ATOM 20 N1 A B 485 -76.892 22.343 -99.492 1.00 34.41 N
ATOM 21 C2 A B 485 -76.404 22.802 -98.335 1.00 34.41 C
ATOM 22 N3 A B 485 -76.523 22.263 -97.129 1.00 34.41 N
ATOM 23 C4 A B 485 -77.251 21.125 -97.174 1.00 34.41 C
ATOM 24 P C B 486 -81.314 22.465 -92.929 1.00 34.11 P
ATOM 25 OP1 C B 486 -81.710 23.365 -91.811 1.00 34.11 O
ATOM 26 OP2 C B 486 -82.148 21.256 -93.212 1.00 34.11 O
ATOM 27 O5' C B 486 -81.096 23.323 -94.261 1.00 34.11 O
TER
ATOM 2 P C A 486 -81.314 22.465 -92.929 1.00 34.11 P
ATOM 3 OP1 C A 486 -81.710 23.365 -91.811 1.00 34.11 O
ATOM 4 OP2 C A 486 -82.148 21.256 -93.212 1.00 34.11 O
ATOM 5 O5' C A 486 -81.096 23.323 -94.261 1.00 34.11 O
ATOM 6 C5' C A 486 -80.290 24.509 -94.254 1.00 34.11 C
ATOM 7 C4' C A 486 -80.119 25.089 -95.651 1.00 34.11 C
ATOM 8 O4' C A 486 -79.301 24.191 -96.469 1.00 34.11 O
ATOM 9 C3' C A 486 -81.396 25.269 -96.476 1.00 34.11 C
ATOM 10 O3' C A 486 -82.120 26.458 -96.175 1.00 34.11 O
ATOM 11 C2' C A 486 -80.865 25.204 -97.903 1.00 34.11 C
ATOM 12 O2' C A 486 -80.159 26.396 -98.233 1.00 34.11 O
ATOM 13 C1' C A 486 -79.860 24.073 -97.764 1.00 34.11 C
ATOM 14 N1 C A 486 -80.505 22.742 -97.856 1.00 33.04 N
ATOM 15 C2 C A 486 -80.877 22.150 -99.060 1.00 33.04 C
ATOM 16 O2 C A 486 -80.693 22.757-100.109 1.00 33.04 O
ATOM 17 N3 C A 486 -81.450 20.922 -99.072 1.00 33.04 N
ATOM 18 C4 C A 486 -81.659 20.264 -97.929 1.00 33.04 C
ATOM 19 N4 C A 486 -82.227 19.053 -97.964 1.00 33.04 N
ATOM 20 C5 C A 486 -81.282 20.844 -96.685 1.00 33.04 C
ATOM 21 C6 C A 486 -80.721 22.058 -96.701 1.00 33.04 C
ATOM 22 P C A 487 -83.730 26.476 -96.330 1.00 57.73 P
ATOM 23 OP1 C A 487 -84.195 27.819 -95.892 1.00 57.73 O
ATOM 24 OP2 C A 487 -84.261 25.267 -95.631 1.00 57.73 O
ATOM 25 O5' C A 487 -83.939 26.315 -97.904 1.00 57.73 O
TER
ATOM 1 O3' U B 484 -79.647 16.019 -93.896 1.00 45.72 O
ATOM 2 P A B 485 -80.883 16.977 -94.185 1.00 34.89 P
ATOM 3 OP1 A B 485 -81.918 16.679 -93.163 1.00 34.89 O
ATOM 4 OP2 A B 485 -81.222 16.806 -95.627 1.00 34.89 O
ATOM 5 O5' A B 485 -80.268 18.429 -93.939 1.00 34.89 O
ATOM 6 C5' A B 485 -79.554 18.726 -92.755 1.00 34.89 C
ATOM 7 C4' A B 485 -78.583 19.852 -92.974 1.00 34.89 C
ATOM 8 O4' A B 485 -77.574 19.452 -93.937 1.00 34.89 O
ATOM 9 C3' A B 485 -79.165 21.131 -93.568 1.00 34.89 C
ATOM 10 O3' A B 485 -79.831 21.943 -92.621 1.00 34.89 O
ATOM 11 C2' A B 485 -77.947 21.793 -94.187 1.00 34.89 C
ATOM 12 O2' A B 485 -77.153 22.437 -93.199 1.00 34.89 O
ATOM 13 C1' A B 485 -77.197 20.571 -94.727 1.00 34.89 C
ATOM 14 N9 A B 485 -77.572 20.300 -96.125 1.00 34.41 N
ATOM 15 C8 A B 485 -78.335 19.274 -96.643 1.00 34.41 C
ATOM 16 N7 A B 485 -78.510 19.368 -97.940 1.00 34.41 N
ATOM 17 C5 A B 485 -77.829 20.533 -98.279 1.00 34.41 C
ATOM 18 C6 A B 485 -77.620 21.190 -99.497 1.00 34.41 C
ATOM 19 N6 A B 485 -78.114 20.721-100.647 1.00 34.41 N
ATOM 20 N1 A B 485 -76.892 22.343 -99.492 1.00 34.41 N
ATOM 21 C2 A B 485 -76.404 22.802 -98.335 1.00 34.41 C
ATOM 22 N3 A B 485 -76.523 22.263 -97.129 1.00 34.41 N
ATOM 23 C4 A B 485 -77.251 21.125 -97.174 1.00 34.41 C
ATOM 24 P C B 486 -81.314 22.465 -92.929 1.00 34.11 P
ATOM 25 OP1 C B 486 -81.710 23.365 -91.811 1.00 34.11 O
ATOM 26 OP2 C B 486 -82.148 21.256 -93.212 1.00 34.11 O
ATOM 27 O5' C B 486 -81.096 23.323 -94.261 1.00 34.11 O
TER
Atoms:
C2: (-80.877,22.150,-99.060)
OP1: (-81.710,23.365,-91.811)
OP2: (-82.148,21.256,-93.212)
C4: (-81.659,20.264,-97.929)
O5': (-81.096,23.323,-94.261)
C3': (-81.396,25.269,-96.476)
C1': (-79.860,24.073,-97.764)
O4': (-79.301,24.191,-96.469)
C5': (-80.290,24.509,-94.254)
P: (-81.314,22.465,-92.929)
O2: (-80.693,22.757,-100.109)
C4': (-80.119,25.089,-95.651)
C2': (-80.865,25.204,-97.903)
O2': (-80.159,26.396,-98.233)
N1: (-80.505,22.742,-97.856)
N3: (-81.450,20.922,-99.072)
N4: (-82.227,19.053,-97.964)
C6: (-80.721,22.058,-96.701)
C5: (-81.282,20.844,-96.685)
O3': (-82.120,26.458,-96.175)
OP1: (-81.710,23.365,-91.811)
OP2: (-82.148,21.256,-93.212)
C4: (-81.659,20.264,-97.929)
O5': (-81.096,23.323,-94.261)
C3': (-81.396,25.269,-96.476)
C1': (-79.860,24.073,-97.764)
O4': (-79.301,24.191,-96.469)
C5': (-80.290,24.509,-94.254)
P: (-81.314,22.465,-92.929)
O2: (-80.693,22.757,-100.109)
C4': (-80.119,25.089,-95.651)
C2': (-80.865,25.204,-97.903)
O2': (-80.159,26.396,-98.233)
N1: (-80.505,22.742,-97.856)
N3: (-81.450,20.922,-99.072)
N4: (-82.227,19.053,-97.964)
C6: (-80.721,22.058,-96.701)
C5: (-81.282,20.844,-96.685)
O3': (-82.120,26.458,-96.175)
OP1: (-81.918,16.679,-93.163)
OP2: (-81.222,16.806,-95.627)
C3': (-79.165,21.131,-93.568)
C1': (-77.197,20.571,-94.727)
C5': (-79.554,18.726,-92.755)
O4': (-77.574,19.452,-93.937)
C8: (-78.335,19.274,-96.643)
O2': (-77.153,22.437,-93.199)
C6: (-77.620,21.190,-99.497)
C5: (-77.829,20.533,-98.279)
C4: (-77.251,21.125,-97.174)
P: (-80.883,16.977,-94.185)
C4': (-78.583,19.852,-92.974)
C2': (-77.947,21.793,-94.187)
C2: (-76.404,22.802,-98.335)
N1: (-76.892,22.343,-99.492)
N3: (-76.523,22.263,-97.129)
N6: (-78.114,20.721,-100.647)
N7: (-78.510,19.368,-97.940)
N9: (-77.572,20.300,-96.125)
O5': (-80.268,18.429,-93.939)
O3': (-79.831,21.943,-92.621)
OP2: (-81.222,16.806,-95.627)
C3': (-79.165,21.131,-93.568)
C1': (-77.197,20.571,-94.727)
C5': (-79.554,18.726,-92.755)
O4': (-77.574,19.452,-93.937)
C8: (-78.335,19.274,-96.643)
O2': (-77.153,22.437,-93.199)
C6: (-77.620,21.190,-99.497)
C5: (-77.829,20.533,-98.279)
C4: (-77.251,21.125,-97.174)
P: (-80.883,16.977,-94.185)
C4': (-78.583,19.852,-92.974)
C2': (-77.947,21.793,-94.187)
C2: (-76.404,22.802,-98.335)
N1: (-76.892,22.343,-99.492)
N3: (-76.523,22.263,-97.129)
N6: (-78.114,20.721,-100.647)
N7: (-78.510,19.368,-97.940)
N9: (-77.572,20.300,-96.125)
O5': (-80.268,18.429,-93.939)
O3': (-79.831,21.943,-92.621)
Image (generated by PyMOL):