Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X129:X128
Extra
PDB:
ATOM 1 O3' A A 128 26.648 40.141 25.402 1.00 19.82 O
ATOM 2 P C A 129 27.235 38.843 24.677 1.00 20.23 P
ATOM 3 OP1 C A 129 28.192 38.217 25.619 1.00 21.70 O
ATOM 4 OP2 C A 129 27.657 39.208 23.309 1.00 20.05 O
ATOM 5 O5' C A 129 25.981 37.879 24.503 1.00 20.83 O
ATOM 6 C5' C A 129 25.338 37.231 25.598 1.00 19.81 C
ATOM 7 C4' C A 129 23.994 36.709 25.124 1.00 19.15 C
ATOM 8 O4' C A 129 23.204 37.835 24.655 1.00 18.41 O
ATOM 9 C3' C A 129 24.047 35.822 23.890 1.00 18.74 C
ATOM 10 O3' C A 129 24.390 34.481 24.168 1.00 18.83 O
ATOM 11 C2' C A 129 22.623 35.956 23.367 1.00 18.86 C
ATOM 12 O2' C A 129 21.659 35.228 24.110 1.00 19.18 O
ATOM 13 C1' C A 129 22.411 37.450 23.544 1.00 17.80 C
ATOM 14 N1 C A 129 22.739 38.272 22.316 1.00 17.72 N
ATOM 15 C2 C A 129 21.793 38.371 21.279 1.00 17.38 C
ATOM 16 O2 C A 129 20.707 37.785 21.369 1.00 18.05 O
ATOM 17 N3 C A 129 22.087 39.122 20.188 1.00 17.00 N
ATOM 18 C4 C A 129 23.258 39.754 20.093 1.00 16.90 C
ATOM 19 N4 C A 129 23.477 40.474 18.990 1.00 16.91 N
ATOM 20 C5 C A 129 24.242 39.672 21.126 1.00 16.71 C
ATOM 21 C6 C A 129 23.941 38.928 22.201 1.00 17.35 C
ATOM 22 P C A 130 25.118 33.635 23.021 1.00 18.43 P
ATOM 23 OP1 C A 130 25.675 32.416 23.653 1.00 18.70 O
ATOM 24 OP2 C A 130 26.009 34.545 22.267 1.00 18.50 O
ATOM 25 O5' C A 130 23.927 33.259 22.029 1.00 17.36 O
TER
ATOM 1 O3' U B 127 27.241 44.562 20.865 1.00 26.33 O
ATOM 2 P A B 128 26.910 42.999 20.707 1.00 25.90 P
ATOM 3 OP1 A B 128 28.209 42.319 20.508 1.00 26.54 O
ATOM 4 OP2 A B 128 25.853 42.819 19.692 1.00 25.67 O
ATOM 5 O5' A B 128 26.299 42.573 22.127 1.00 24.22 O
ATOM 6 C5' A B 128 27.094 42.558 23.319 1.00 21.60 C
ATOM 7 C4' A B 128 26.216 42.375 24.545 1.00 19.68 C
ATOM 8 O4' A B 128 25.014 43.182 24.434 1.00 18.08 O
ATOM 9 C3' A B 128 25.689 40.963 24.747 1.00 19.21 C
ATOM 10 O3' A B 128 26.648 40.141 25.402 1.00 19.82 O
ATOM 11 C2' A B 128 24.465 41.214 25.616 1.00 18.15 C
ATOM 12 O2' A B 128 24.777 41.478 26.967 1.00 18.46 O
ATOM 13 C1' A B 128 23.905 42.474 24.963 1.00 16.80 C
ATOM 14 N9 A B 128 22.944 42.193 23.895 1.00 15.21 N
ATOM 15 C8 A B 128 23.043 42.610 22.601 1.00 14.56 C
ATOM 16 N7 A B 128 22.049 42.228 21.843 1.00 14.14 N
ATOM 17 C5 A B 128 21.238 41.507 22.693 1.00 13.20 C
ATOM 18 C6 A B 128 20.019 40.835 22.484 1.00 12.90 C
ATOM 19 N6 A B 128 19.412 40.804 21.295 1.00 13.33 N
ATOM 20 N1 A B 128 19.455 40.206 23.546 1.00 12.75 N
ATOM 21 C2 A B 128 20.077 40.250 24.736 1.00 12.17 C
ATOM 22 N3 A B 128 21.229 40.853 25.043 1.00 12.62 N
ATOM 23 C4 A B 128 21.767 41.472 23.971 1.00 13.72 C
ATOM 24 P C B 129 27.235 38.843 24.677 1.00 20.23 P
ATOM 25 OP1 C B 129 28.192 38.217 25.619 1.00 21.70 O
ATOM 26 OP2 C B 129 27.657 39.208 23.309 1.00 20.05 O
ATOM 27 O5' C B 129 25.981 37.879 24.503 1.00 20.83 O
TER
ATOM 2 P C A 129 27.235 38.843 24.677 1.00 20.23 P
ATOM 3 OP1 C A 129 28.192 38.217 25.619 1.00 21.70 O
ATOM 4 OP2 C A 129 27.657 39.208 23.309 1.00 20.05 O
ATOM 5 O5' C A 129 25.981 37.879 24.503 1.00 20.83 O
ATOM 6 C5' C A 129 25.338 37.231 25.598 1.00 19.81 C
ATOM 7 C4' C A 129 23.994 36.709 25.124 1.00 19.15 C
ATOM 8 O4' C A 129 23.204 37.835 24.655 1.00 18.41 O
ATOM 9 C3' C A 129 24.047 35.822 23.890 1.00 18.74 C
ATOM 10 O3' C A 129 24.390 34.481 24.168 1.00 18.83 O
ATOM 11 C2' C A 129 22.623 35.956 23.367 1.00 18.86 C
ATOM 12 O2' C A 129 21.659 35.228 24.110 1.00 19.18 O
ATOM 13 C1' C A 129 22.411 37.450 23.544 1.00 17.80 C
ATOM 14 N1 C A 129 22.739 38.272 22.316 1.00 17.72 N
ATOM 15 C2 C A 129 21.793 38.371 21.279 1.00 17.38 C
ATOM 16 O2 C A 129 20.707 37.785 21.369 1.00 18.05 O
ATOM 17 N3 C A 129 22.087 39.122 20.188 1.00 17.00 N
ATOM 18 C4 C A 129 23.258 39.754 20.093 1.00 16.90 C
ATOM 19 N4 C A 129 23.477 40.474 18.990 1.00 16.91 N
ATOM 20 C5 C A 129 24.242 39.672 21.126 1.00 16.71 C
ATOM 21 C6 C A 129 23.941 38.928 22.201 1.00 17.35 C
ATOM 22 P C A 130 25.118 33.635 23.021 1.00 18.43 P
ATOM 23 OP1 C A 130 25.675 32.416 23.653 1.00 18.70 O
ATOM 24 OP2 C A 130 26.009 34.545 22.267 1.00 18.50 O
ATOM 25 O5' C A 130 23.927 33.259 22.029 1.00 17.36 O
TER
ATOM 1 O3' U B 127 27.241 44.562 20.865 1.00 26.33 O
ATOM 2 P A B 128 26.910 42.999 20.707 1.00 25.90 P
ATOM 3 OP1 A B 128 28.209 42.319 20.508 1.00 26.54 O
ATOM 4 OP2 A B 128 25.853 42.819 19.692 1.00 25.67 O
ATOM 5 O5' A B 128 26.299 42.573 22.127 1.00 24.22 O
ATOM 6 C5' A B 128 27.094 42.558 23.319 1.00 21.60 C
ATOM 7 C4' A B 128 26.216 42.375 24.545 1.00 19.68 C
ATOM 8 O4' A B 128 25.014 43.182 24.434 1.00 18.08 O
ATOM 9 C3' A B 128 25.689 40.963 24.747 1.00 19.21 C
ATOM 10 O3' A B 128 26.648 40.141 25.402 1.00 19.82 O
ATOM 11 C2' A B 128 24.465 41.214 25.616 1.00 18.15 C
ATOM 12 O2' A B 128 24.777 41.478 26.967 1.00 18.46 O
ATOM 13 C1' A B 128 23.905 42.474 24.963 1.00 16.80 C
ATOM 14 N9 A B 128 22.944 42.193 23.895 1.00 15.21 N
ATOM 15 C8 A B 128 23.043 42.610 22.601 1.00 14.56 C
ATOM 16 N7 A B 128 22.049 42.228 21.843 1.00 14.14 N
ATOM 17 C5 A B 128 21.238 41.507 22.693 1.00 13.20 C
ATOM 18 C6 A B 128 20.019 40.835 22.484 1.00 12.90 C
ATOM 19 N6 A B 128 19.412 40.804 21.295 1.00 13.33 N
ATOM 20 N1 A B 128 19.455 40.206 23.546 1.00 12.75 N
ATOM 21 C2 A B 128 20.077 40.250 24.736 1.00 12.17 C
ATOM 22 N3 A B 128 21.229 40.853 25.043 1.00 12.62 N
ATOM 23 C4 A B 128 21.767 41.472 23.971 1.00 13.72 C
ATOM 24 P C B 129 27.235 38.843 24.677 1.00 20.23 P
ATOM 25 OP1 C B 129 28.192 38.217 25.619 1.00 21.70 O
ATOM 26 OP2 C B 129 27.657 39.208 23.309 1.00 20.05 O
ATOM 27 O5' C B 129 25.981 37.879 24.503 1.00 20.83 O
TER
Atoms:
C2: (21.793,38.371,21.279)
OP1: (28.192,38.217,25.619)
OP2: (27.657,39.208,23.309)
C4: (23.258,39.754,20.093)
O5': (25.981,37.879,24.503)
C3': (24.047,35.822,23.890)
C1': (22.411,37.450,23.544)
O4': (23.204,37.835,24.655)
C5': (25.338,37.231,25.598)
P: (27.235,38.843,24.677)
O2: (20.707,37.785,21.369)
C4': (23.994,36.709,25.124)
C2': (22.623,35.956,23.367)
O2': (21.659,35.228,24.110)
N1: (22.739,38.272,22.316)
N3: (22.087,39.122,20.188)
N4: (23.477,40.474,18.990)
C6: (23.941,38.928,22.201)
C5: (24.242,39.672,21.126)
O3': (24.390,34.481,24.168)
OP1: (28.192,38.217,25.619)
OP2: (27.657,39.208,23.309)
C4: (23.258,39.754,20.093)
O5': (25.981,37.879,24.503)
C3': (24.047,35.822,23.890)
C1': (22.411,37.450,23.544)
O4': (23.204,37.835,24.655)
C5': (25.338,37.231,25.598)
P: (27.235,38.843,24.677)
O2: (20.707,37.785,21.369)
C4': (23.994,36.709,25.124)
C2': (22.623,35.956,23.367)
O2': (21.659,35.228,24.110)
N1: (22.739,38.272,22.316)
N3: (22.087,39.122,20.188)
N4: (23.477,40.474,18.990)
C6: (23.941,38.928,22.201)
C5: (24.242,39.672,21.126)
O3': (24.390,34.481,24.168)
OP1: (28.209,42.319,20.508)
OP2: (25.853,42.819,19.692)
C3': (25.689,40.963,24.747)
C1': (23.905,42.474,24.963)
C5': (27.094,42.558,23.319)
O4': (25.014,43.182,24.434)
C8: (23.043,42.610,22.601)
O2': (24.777,41.478,26.967)
C6: (20.019,40.835,22.484)
C5: (21.238,41.507,22.693)
C4: (21.767,41.472,23.971)
P: (26.910,42.999,20.707)
C4': (26.216,42.375,24.545)
C2': (24.465,41.214,25.616)
C2: (20.077,40.250,24.736)
N1: (19.455,40.206,23.546)
N3: (21.229,40.853,25.043)
N6: (19.412,40.804,21.295)
N7: (22.049,42.228,21.843)
N9: (22.944,42.193,23.895)
O5': (26.299,42.573,22.127)
O3': (26.648,40.141,25.402)
OP2: (25.853,42.819,19.692)
C3': (25.689,40.963,24.747)
C1': (23.905,42.474,24.963)
C5': (27.094,42.558,23.319)
O4': (25.014,43.182,24.434)
C8: (23.043,42.610,22.601)
O2': (24.777,41.478,26.967)
C6: (20.019,40.835,22.484)
C5: (21.238,41.507,22.693)
C4: (21.767,41.472,23.971)
P: (26.910,42.999,20.707)
C4': (26.216,42.375,24.545)
C2': (24.465,41.214,25.616)
C2: (20.077,40.250,24.736)
N1: (19.455,40.206,23.546)
N3: (21.229,40.853,25.043)
N6: (19.412,40.804,21.295)
N7: (22.049,42.228,21.843)
N9: (22.944,42.193,23.895)
O5': (26.299,42.573,22.127)
O3': (26.648,40.141,25.402)
Image (generated by PyMOL):