Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02187:02186
Extra
PDB:
ATOM 1 O3' A A2186 96.452 42.567 104.560 1.00102.02 O
ATOM 2 P C A2187 95.012 41.875 104.390 1.00 99.23 P
ATOM 3 OP1 C A2187 94.426 42.401 103.131 1.00 99.58 O
ATOM 4 OP2 C A2187 94.261 42.021 105.662 1.00 99.85 O
ATOM 5 O5' C A2187 95.333 40.338 104.146 1.00 95.20 O
ATOM 6 C5' C A2187 95.879 39.885 102.899 1.00 90.03 C
ATOM 7 C4' C A2187 96.486 38.522 103.079 1.00 88.05 C
ATOM 8 O4' C A2187 97.476 38.611 104.138 1.00 87.95 O
ATOM 9 C3' C A2187 95.524 37.447 103.560 1.00 86.68 C
ATOM 10 O3' C A2187 94.809 36.847 102.484 1.00 86.09 O
ATOM 11 C2' C A2187 96.459 36.479 104.270 1.00 86.54 C
ATOM 12 O2' C A2187 97.193 35.665 103.377 1.00 85.20 O
ATOM 13 C1' C A2187 97.409 37.457 104.962 1.00 86.87 C
ATOM 14 N1 C A2187 96.931 37.875 106.298 1.00 86.82 N
ATOM 15 C2 C A2187 96.963 36.950 107.357 1.00 86.85 C
ATOM 16 O2 C A2187 97.426 35.812 107.157 1.00 86.49 O
ATOM 17 N3 C A2187 96.494 37.324 108.572 1.00 86.79 N
ATOM 18 C4 C A2187 96.023 38.560 108.755 1.00 87.31 C
ATOM 19 N4 C A2187 95.569 38.886 109.968 1.00 87.83 N
ATOM 20 C5 C A2187 95.995 39.520 107.703 1.00 86.81 C
ATOM 21 C6 C A2187 96.452 39.140 106.506 1.00 86.28 C
ATOM 22 P C A2188 93.342 36.230 102.737 1.00 85.22 P
ATOM 23 OP1 C A2188 92.820 35.770 101.418 1.00 84.13 O
ATOM 24 OP2 C A2188 92.552 37.194 103.549 1.00 84.08 O
ATOM 25 O5' C A2188 93.607 34.942 103.634 1.00 83.44 O
TER
ATOM 1 P A B2186 95.306 42.956 109.435 1.00111.68 P
ATOM 2 OP1 A B2186 94.251 42.414 108.548 1.00112.98 O
ATOM 3 OP2 A B2186 95.687 42.207 110.655 1.00111.67 O
ATOM 4 O5' A B2186 96.609 43.168 108.547 1.00110.38 O
ATOM 5 C5' A B2186 96.611 44.064 107.422 1.00107.89 C
ATOM 6 C4' A B2186 97.614 43.593 106.400 1.00107.08 C
ATOM 7 O4' A B2186 98.843 43.273 107.096 1.00108.43 O
ATOM 8 C3' A B2186 97.263 42.287 105.703 1.00106.23 C
ATOM 9 O3' A B2186 96.452 42.567 104.560 1.00102.02 O
ATOM 10 C2' A B2186 98.632 41.772 105.252 1.00108.66 C
ATOM 11 O2' A B2186 99.048 42.307 104.010 1.00109.76 O
ATOM 12 C1' A B2186 99.560 42.311 106.349 1.00110.23 C
ATOM 13 N9 A B2186 100.147 41.329 107.265 1.00112.65 N
ATOM 14 C8 A B2186 99.511 40.546 108.199 1.00113.90 C
ATOM 15 N7 A B2186 100.320 39.756 108.868 1.00114.62 N
ATOM 16 C5 A B2186 101.574 40.035 108.340 1.00114.36 C
ATOM 17 C6 A B2186 102.857 39.526 108.623 1.00114.01 C
ATOM 18 N6 A B2186 103.098 38.588 109.543 1.00112.93 N
ATOM 19 N1 A B2186 103.897 40.021 107.918 1.00113.90 N
ATOM 20 C2 A B2186 103.657 40.961 106.995 1.00113.85 C
ATOM 21 N3 A B2186 102.501 41.517 106.637 1.00113.82 N
ATOM 22 C4 A B2186 101.485 41.005 107.355 1.00113.92 C
ATOM 23 P C B2187 95.012 41.875 104.390 1.00 99.23 P
ATOM 24 OP1 C B2187 94.426 42.401 103.131 1.00 99.58 O
ATOM 25 OP2 C B2187 94.261 42.021 105.662 1.00 99.85 O
ATOM 26 O5' C B2187 95.333 40.338 104.146 1.00 95.20 O
TER
ATOM 2 P C A2187 95.012 41.875 104.390 1.00 99.23 P
ATOM 3 OP1 C A2187 94.426 42.401 103.131 1.00 99.58 O
ATOM 4 OP2 C A2187 94.261 42.021 105.662 1.00 99.85 O
ATOM 5 O5' C A2187 95.333 40.338 104.146 1.00 95.20 O
ATOM 6 C5' C A2187 95.879 39.885 102.899 1.00 90.03 C
ATOM 7 C4' C A2187 96.486 38.522 103.079 1.00 88.05 C
ATOM 8 O4' C A2187 97.476 38.611 104.138 1.00 87.95 O
ATOM 9 C3' C A2187 95.524 37.447 103.560 1.00 86.68 C
ATOM 10 O3' C A2187 94.809 36.847 102.484 1.00 86.09 O
ATOM 11 C2' C A2187 96.459 36.479 104.270 1.00 86.54 C
ATOM 12 O2' C A2187 97.193 35.665 103.377 1.00 85.20 O
ATOM 13 C1' C A2187 97.409 37.457 104.962 1.00 86.87 C
ATOM 14 N1 C A2187 96.931 37.875 106.298 1.00 86.82 N
ATOM 15 C2 C A2187 96.963 36.950 107.357 1.00 86.85 C
ATOM 16 O2 C A2187 97.426 35.812 107.157 1.00 86.49 O
ATOM 17 N3 C A2187 96.494 37.324 108.572 1.00 86.79 N
ATOM 18 C4 C A2187 96.023 38.560 108.755 1.00 87.31 C
ATOM 19 N4 C A2187 95.569 38.886 109.968 1.00 87.83 N
ATOM 20 C5 C A2187 95.995 39.520 107.703 1.00 86.81 C
ATOM 21 C6 C A2187 96.452 39.140 106.506 1.00 86.28 C
ATOM 22 P C A2188 93.342 36.230 102.737 1.00 85.22 P
ATOM 23 OP1 C A2188 92.820 35.770 101.418 1.00 84.13 O
ATOM 24 OP2 C A2188 92.552 37.194 103.549 1.00 84.08 O
ATOM 25 O5' C A2188 93.607 34.942 103.634 1.00 83.44 O
TER
ATOM 1 P A B2186 95.306 42.956 109.435 1.00111.68 P
ATOM 2 OP1 A B2186 94.251 42.414 108.548 1.00112.98 O
ATOM 3 OP2 A B2186 95.687 42.207 110.655 1.00111.67 O
ATOM 4 O5' A B2186 96.609 43.168 108.547 1.00110.38 O
ATOM 5 C5' A B2186 96.611 44.064 107.422 1.00107.89 C
ATOM 6 C4' A B2186 97.614 43.593 106.400 1.00107.08 C
ATOM 7 O4' A B2186 98.843 43.273 107.096 1.00108.43 O
ATOM 8 C3' A B2186 97.263 42.287 105.703 1.00106.23 C
ATOM 9 O3' A B2186 96.452 42.567 104.560 1.00102.02 O
ATOM 10 C2' A B2186 98.632 41.772 105.252 1.00108.66 C
ATOM 11 O2' A B2186 99.048 42.307 104.010 1.00109.76 O
ATOM 12 C1' A B2186 99.560 42.311 106.349 1.00110.23 C
ATOM 13 N9 A B2186 100.147 41.329 107.265 1.00112.65 N
ATOM 14 C8 A B2186 99.511 40.546 108.199 1.00113.90 C
ATOM 15 N7 A B2186 100.320 39.756 108.868 1.00114.62 N
ATOM 16 C5 A B2186 101.574 40.035 108.340 1.00114.36 C
ATOM 17 C6 A B2186 102.857 39.526 108.623 1.00114.01 C
ATOM 18 N6 A B2186 103.098 38.588 109.543 1.00112.93 N
ATOM 19 N1 A B2186 103.897 40.021 107.918 1.00113.90 N
ATOM 20 C2 A B2186 103.657 40.961 106.995 1.00113.85 C
ATOM 21 N3 A B2186 102.501 41.517 106.637 1.00113.82 N
ATOM 22 C4 A B2186 101.485 41.005 107.355 1.00113.92 C
ATOM 23 P C B2187 95.012 41.875 104.390 1.00 99.23 P
ATOM 24 OP1 C B2187 94.426 42.401 103.131 1.00 99.58 O
ATOM 25 OP2 C B2187 94.261 42.021 105.662 1.00 99.85 O
ATOM 26 O5' C B2187 95.333 40.338 104.146 1.00 95.20 O
TER
Atoms:
C2: (96.963,36.950,107.357)
OP1: (94.426,42.401,103.131)
OP2: (94.261,42.021,105.662)
C4: (96.023,38.560,108.755)
O5': (95.333,40.338,104.146)
C3': (95.524,37.447,103.560)
C1': (97.409,37.457,104.962)
O4': (97.476,38.611,104.138)
C5': (95.879,39.885,102.899)
P: (95.012,41.875,104.390)
O2: (97.426,35.812,107.157)
C4': (96.486,38.522,103.079)
C2': (96.459,36.479,104.270)
O2': (97.193,35.665,103.377)
N1: (96.931,37.875,106.298)
N3: (96.494,37.324,108.572)
N4: (95.569,38.886,109.968)
C6: (96.452,39.140,106.506)
C5: (95.995,39.520,107.703)
O3': (94.809,36.847,102.484)
OP1: (94.426,42.401,103.131)
OP2: (94.261,42.021,105.662)
C4: (96.023,38.560,108.755)
O5': (95.333,40.338,104.146)
C3': (95.524,37.447,103.560)
C1': (97.409,37.457,104.962)
O4': (97.476,38.611,104.138)
C5': (95.879,39.885,102.899)
P: (95.012,41.875,104.390)
O2: (97.426,35.812,107.157)
C4': (96.486,38.522,103.079)
C2': (96.459,36.479,104.270)
O2': (97.193,35.665,103.377)
N1: (96.931,37.875,106.298)
N3: (96.494,37.324,108.572)
N4: (95.569,38.886,109.968)
C6: (96.452,39.140,106.506)
C5: (95.995,39.520,107.703)
O3': (94.809,36.847,102.484)
OP1: (94.251,42.414,108.548)
OP2: (95.687,42.207,110.655)
C3': (97.263,42.287,105.703)
C1': (99.560,42.311,106.349)
C5': (96.611,44.064,107.422)
O4': (98.843,43.273,107.096)
C8: (99.511,40.546,108.199)
O2': (99.048,42.307,104.010)
C6: (102.857,39.526,108.623)
C5: (101.574,40.035,108.340)
C4: (101.485,41.005,107.355)
P: (95.306,42.956,109.435)
C4': (97.614,43.593,106.400)
C2': (98.632,41.772,105.252)
C2: (103.657,40.961,106.995)
N1: (103.897,40.021,107.918)
N3: (102.501,41.517,106.637)
N6: (103.098,38.588,109.543)
N7: (100.320,39.756,108.868)
N9: (100.147,41.329,107.265)
O5': (96.609,43.168,108.547)
O3': (96.452,42.567,104.560)
OP2: (95.687,42.207,110.655)
C3': (97.263,42.287,105.703)
C1': (99.560,42.311,106.349)
C5': (96.611,44.064,107.422)
O4': (98.843,43.273,107.096)
C8: (99.511,40.546,108.199)
O2': (99.048,42.307,104.010)
C6: (102.857,39.526,108.623)
C5: (101.574,40.035,108.340)
C4: (101.485,41.005,107.355)
P: (95.306,42.956,109.435)
C4': (97.614,43.593,106.400)
C2': (98.632,41.772,105.252)
C2: (103.657,40.961,106.995)
N1: (103.897,40.021,107.918)
N3: (102.501,41.517,106.637)
N6: (103.098,38.588,109.543)
N7: (100.320,39.756,108.868)
N9: (100.147,41.329,107.265)
O5': (96.609,43.168,108.547)
O3': (96.452,42.567,104.560)
Image (generated by PyMOL):