Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIY:A129:A128
Extra
PDB:
ATOM 1 O3' A A 128 26.733 40.264 25.324 1.00 36.83 O
ATOM 2 P C A 129 27.232 38.907 24.637 1.00 37.58 P
ATOM 3 OP1 C A 129 28.045 38.175 25.641 1.00 37.21 O
ATOM 4 OP2 C A 129 27.789 39.250 23.306 1.00 37.90 O
ATOM 5 O5' C A 129 25.899 38.078 24.360 1.00 36.55 O
ATOM 6 C5' C A 129 25.222 37.431 25.426 1.00 35.68 C
ATOM 7 C4' C A 129 23.893 36.923 24.921 1.00 34.66 C
ATOM 8 O4' C A 129 23.129 38.059 24.449 1.00 34.23 O
ATOM 9 C3' C A 129 24.006 36.060 23.684 1.00 34.99 C
ATOM 10 O3' C A 129 24.374 34.729 24.023 1.00 35.74 O
ATOM 11 C2' C A 129 22.600 36.209 23.107 1.00 34.30 C
ATOM 12 O2' C A 129 21.629 35.436 23.781 1.00 35.44 O
ATOM 13 C1' C A 129 22.343 37.696 23.332 1.00 32.76 C
ATOM 14 N1 C A 129 22.693 38.535 22.138 1.00 31.56 N
ATOM 15 C2 C A 129 21.810 38.581 21.048 1.00 31.05 C
ATOM 16 O2 C A 129 20.753 37.947 21.090 1.00 31.33 O
ATOM 17 N3 C A 129 22.133 39.329 19.963 1.00 31.07 N
ATOM 18 C4 C A 129 23.280 40.012 19.934 1.00 30.74 C
ATOM 19 N4 C A 129 23.538 40.735 18.844 1.00 30.89 N
ATOM 20 C5 C A 129 24.201 39.982 21.023 1.00 30.69 C
ATOM 21 C6 C A 129 23.869 39.237 22.090 1.00 31.11 C
ATOM 22 P C A 130 25.049 33.769 22.926 1.00 36.66 P
ATOM 23 OP1 C A 130 25.425 32.518 23.629 1.00 36.45 O
ATOM 24 OP2 C A 130 26.066 34.527 22.154 1.00 35.73 O
ATOM 25 O5' C A 130 23.843 33.483 21.913 1.00 35.93 O
TER
ATOM 1 O3' U B 127 27.384 44.429 20.759 1.00 37.55 O
ATOM 2 P A B 128 26.914 42.919 20.497 1.00 37.91 P
ATOM 3 OP1 A B 128 28.120 42.113 20.201 1.00 37.94 O
ATOM 4 OP2 A B 128 25.799 42.924 19.524 1.00 37.22 O
ATOM 5 O5' A B 128 26.333 42.499 21.934 1.00 38.23 O
ATOM 6 C5' A B 128 27.161 42.532 23.115 1.00 37.58 C
ATOM 7 C4' A B 128 26.336 42.454 24.389 1.00 36.97 C
ATOM 8 O4' A B 128 25.156 43.297 24.296 1.00 36.73 O
ATOM 9 C3' A B 128 25.770 41.075 24.677 1.00 36.86 C
ATOM 10 O3' A B 128 26.733 40.264 25.324 1.00 36.83 O
ATOM 11 C2' A B 128 24.585 41.408 25.576 1.00 36.71 C
ATOM 12 O2' A B 128 24.965 41.733 26.900 1.00 37.16 O
ATOM 13 C1' A B 128 24.032 42.651 24.879 1.00 36.08 C
ATOM 14 N9 A B 128 23.020 42.385 23.846 1.00 35.37 N
ATOM 15 C8 A B 128 23.055 42.831 22.556 1.00 34.96 C
ATOM 16 N7 A B 128 22.031 42.464 21.827 1.00 34.77 N
ATOM 17 C5 A B 128 21.258 41.717 22.692 1.00 34.58 C
ATOM 18 C6 A B 128 20.036 41.034 22.519 1.00 34.54 C
ATOM 19 N6 A B 128 19.360 41.016 21.364 1.00 34.85 N
ATOM 20 N1 A B 128 19.522 40.374 23.581 1.00 34.41 N
ATOM 21 C2 A B 128 20.193 40.395 24.738 1.00 34.57 C
ATOM 22 N3 A B 128 21.351 40.999 25.013 1.00 35.18 N
ATOM 23 C4 A B 128 21.846 41.654 23.942 1.00 35.06 C
ATOM 24 P C B 129 27.232 38.907 24.637 1.00 37.58 P
ATOM 25 OP1 C B 129 28.045 38.175 25.641 1.00 37.21 O
ATOM 26 OP2 C B 129 27.789 39.250 23.306 1.00 37.90 O
ATOM 27 O5' C B 129 25.899 38.078 24.360 1.00 36.55 O
TER
ATOM 2 P C A 129 27.232 38.907 24.637 1.00 37.58 P
ATOM 3 OP1 C A 129 28.045 38.175 25.641 1.00 37.21 O
ATOM 4 OP2 C A 129 27.789 39.250 23.306 1.00 37.90 O
ATOM 5 O5' C A 129 25.899 38.078 24.360 1.00 36.55 O
ATOM 6 C5' C A 129 25.222 37.431 25.426 1.00 35.68 C
ATOM 7 C4' C A 129 23.893 36.923 24.921 1.00 34.66 C
ATOM 8 O4' C A 129 23.129 38.059 24.449 1.00 34.23 O
ATOM 9 C3' C A 129 24.006 36.060 23.684 1.00 34.99 C
ATOM 10 O3' C A 129 24.374 34.729 24.023 1.00 35.74 O
ATOM 11 C2' C A 129 22.600 36.209 23.107 1.00 34.30 C
ATOM 12 O2' C A 129 21.629 35.436 23.781 1.00 35.44 O
ATOM 13 C1' C A 129 22.343 37.696 23.332 1.00 32.76 C
ATOM 14 N1 C A 129 22.693 38.535 22.138 1.00 31.56 N
ATOM 15 C2 C A 129 21.810 38.581 21.048 1.00 31.05 C
ATOM 16 O2 C A 129 20.753 37.947 21.090 1.00 31.33 O
ATOM 17 N3 C A 129 22.133 39.329 19.963 1.00 31.07 N
ATOM 18 C4 C A 129 23.280 40.012 19.934 1.00 30.74 C
ATOM 19 N4 C A 129 23.538 40.735 18.844 1.00 30.89 N
ATOM 20 C5 C A 129 24.201 39.982 21.023 1.00 30.69 C
ATOM 21 C6 C A 129 23.869 39.237 22.090 1.00 31.11 C
ATOM 22 P C A 130 25.049 33.769 22.926 1.00 36.66 P
ATOM 23 OP1 C A 130 25.425 32.518 23.629 1.00 36.45 O
ATOM 24 OP2 C A 130 26.066 34.527 22.154 1.00 35.73 O
ATOM 25 O5' C A 130 23.843 33.483 21.913 1.00 35.93 O
TER
ATOM 1 O3' U B 127 27.384 44.429 20.759 1.00 37.55 O
ATOM 2 P A B 128 26.914 42.919 20.497 1.00 37.91 P
ATOM 3 OP1 A B 128 28.120 42.113 20.201 1.00 37.94 O
ATOM 4 OP2 A B 128 25.799 42.924 19.524 1.00 37.22 O
ATOM 5 O5' A B 128 26.333 42.499 21.934 1.00 38.23 O
ATOM 6 C5' A B 128 27.161 42.532 23.115 1.00 37.58 C
ATOM 7 C4' A B 128 26.336 42.454 24.389 1.00 36.97 C
ATOM 8 O4' A B 128 25.156 43.297 24.296 1.00 36.73 O
ATOM 9 C3' A B 128 25.770 41.075 24.677 1.00 36.86 C
ATOM 10 O3' A B 128 26.733 40.264 25.324 1.00 36.83 O
ATOM 11 C2' A B 128 24.585 41.408 25.576 1.00 36.71 C
ATOM 12 O2' A B 128 24.965 41.733 26.900 1.00 37.16 O
ATOM 13 C1' A B 128 24.032 42.651 24.879 1.00 36.08 C
ATOM 14 N9 A B 128 23.020 42.385 23.846 1.00 35.37 N
ATOM 15 C8 A B 128 23.055 42.831 22.556 1.00 34.96 C
ATOM 16 N7 A B 128 22.031 42.464 21.827 1.00 34.77 N
ATOM 17 C5 A B 128 21.258 41.717 22.692 1.00 34.58 C
ATOM 18 C6 A B 128 20.036 41.034 22.519 1.00 34.54 C
ATOM 19 N6 A B 128 19.360 41.016 21.364 1.00 34.85 N
ATOM 20 N1 A B 128 19.522 40.374 23.581 1.00 34.41 N
ATOM 21 C2 A B 128 20.193 40.395 24.738 1.00 34.57 C
ATOM 22 N3 A B 128 21.351 40.999 25.013 1.00 35.18 N
ATOM 23 C4 A B 128 21.846 41.654 23.942 1.00 35.06 C
ATOM 24 P C B 129 27.232 38.907 24.637 1.00 37.58 P
ATOM 25 OP1 C B 129 28.045 38.175 25.641 1.00 37.21 O
ATOM 26 OP2 C B 129 27.789 39.250 23.306 1.00 37.90 O
ATOM 27 O5' C B 129 25.899 38.078 24.360 1.00 36.55 O
TER
Atoms:
C2: (21.810,38.581,21.048)
OP1: (28.045,38.175,25.641)
OP2: (27.789,39.250,23.306)
C4: (23.280,40.012,19.934)
O5': (25.899,38.078,24.360)
C3': (24.006,36.060,23.684)
C1': (22.343,37.696,23.332)
O4': (23.129,38.059,24.449)
C5': (25.222,37.431,25.426)
P: (27.232,38.907,24.637)
O2: (20.753,37.947,21.090)
C4': (23.893,36.923,24.921)
C2': (22.600,36.209,23.107)
O2': (21.629,35.436,23.781)
N1: (22.693,38.535,22.138)
N3: (22.133,39.329,19.963)
N4: (23.538,40.735,18.844)
C6: (23.869,39.237,22.090)
C5: (24.201,39.982,21.023)
O3': (24.374,34.729,24.023)
OP1: (28.045,38.175,25.641)
OP2: (27.789,39.250,23.306)
C4: (23.280,40.012,19.934)
O5': (25.899,38.078,24.360)
C3': (24.006,36.060,23.684)
C1': (22.343,37.696,23.332)
O4': (23.129,38.059,24.449)
C5': (25.222,37.431,25.426)
P: (27.232,38.907,24.637)
O2: (20.753,37.947,21.090)
C4': (23.893,36.923,24.921)
C2': (22.600,36.209,23.107)
O2': (21.629,35.436,23.781)
N1: (22.693,38.535,22.138)
N3: (22.133,39.329,19.963)
N4: (23.538,40.735,18.844)
C6: (23.869,39.237,22.090)
C5: (24.201,39.982,21.023)
O3': (24.374,34.729,24.023)
OP1: (28.120,42.113,20.201)
OP2: (25.799,42.924,19.524)
C3': (25.770,41.075,24.677)
C1': (24.032,42.651,24.879)
C5': (27.161,42.532,23.115)
O4': (25.156,43.297,24.296)
C8: (23.055,42.831,22.556)
O2': (24.965,41.733,26.900)
C6: (20.036,41.034,22.519)
C5: (21.258,41.717,22.692)
C4: (21.846,41.654,23.942)
P: (26.914,42.919,20.497)
C4': (26.336,42.454,24.389)
C2': (24.585,41.408,25.576)
C2: (20.193,40.395,24.738)
N1: (19.522,40.374,23.581)
N3: (21.351,40.999,25.013)
N6: (19.360,41.016,21.364)
N7: (22.031,42.464,21.827)
N9: (23.020,42.385,23.846)
O5': (26.333,42.499,21.934)
O3': (26.733,40.264,25.324)
OP2: (25.799,42.924,19.524)
C3': (25.770,41.075,24.677)
C1': (24.032,42.651,24.879)
C5': (27.161,42.532,23.115)
O4': (25.156,43.297,24.296)
C8: (23.055,42.831,22.556)
O2': (24.965,41.733,26.900)
C6: (20.036,41.034,22.519)
C5: (21.258,41.717,22.692)
C4: (21.846,41.654,23.942)
P: (26.914,42.919,20.497)
C4': (26.336,42.454,24.389)
C2': (24.585,41.408,25.576)
C2: (20.193,40.395,24.738)
N1: (19.522,40.374,23.581)
N3: (21.351,40.999,25.013)
N6: (19.360,41.016,21.364)
N7: (22.031,42.464,21.827)
N9: (23.020,42.385,23.846)
O5': (26.333,42.499,21.934)
O3': (26.733,40.264,25.324)
Image (generated by PyMOL):