ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:01039:01038

Extra

PDB:
ATOM 1 O3' A A1038 34.624 110.537 106.397 1.00 34.39 O
ATOM 2 P C A1039 34.281 109.436 105.286 1.00 35.11 P
ATOM 3 OP1 C A1039 34.118 110.191 104.024 1.00 31.33 O
ATOM 4 OP2 C A1039 33.186 108.541 105.762 1.00 36.00 O
ATOM 5 O5' C A1039 35.583 108.534 105.225 1.00 34.96 O
ATOM 6 C5' C A1039 36.712 108.881 104.423 1.00 37.39 C
ATOM 7 C4' C A1039 37.811 107.892 104.685 1.00 40.97 C
ATOM 8 O4' C A1039 38.138 107.979 106.101 1.00 41.10 O
ATOM 9 C3' C A1039 37.401 106.430 104.531 1.00 44.64 C
ATOM 10 O3' C A1039 37.408 105.838 103.227 1.00 47.88 O
ATOM 11 C2' C A1039 38.441 105.748 105.399 1.00 46.76 C
ATOM 12 O2' C A1039 39.724 105.723 104.786 1.00 49.44 O
ATOM 13 C1' C A1039 38.467 106.691 106.596 1.00 44.13 C
ATOM 14 N1 C A1039 37.480 106.292 107.625 1.00 44.09 N
ATOM 15 C2 C A1039 37.901 105.444 108.670 1.00 45.90 C
ATOM 16 O2 C A1039 39.079 105.040 108.688 1.00 48.10 O
ATOM 17 N3 C A1039 37.014 105.087 109.631 1.00 44.76 N
ATOM 18 C4 C A1039 35.759 105.540 109.583 1.00 42.83 C
ATOM 19 N4 C A1039 34.929 105.184 110.571 1.00 40.09 N
ATOM 20 C5 C A1039 35.301 106.383 108.526 1.00 41.60 C
ATOM 21 C6 C A1039 36.186 106.730 107.578 1.00 41.82 C
ATOM 22 P A A1040 38.151 106.549 101.993 1.00 49.20 P
ATOM 23 OP1 A A1040 39.402 107.185 102.488 1.00 49.52 O
ATOM 24 OP2 A A1040 37.157 107.353 101.240 1.00 48.47 O
ATOM 25 O5' A A1040 38.586 105.316 101.088 1.00 42.14 O
TER

ATOM 1 O3' A B1037 31.403 108.740 111.356 1.00 31.33 O
ATOM 2 P A B1038 31.838 107.798 110.130 1.00 32.84 P
ATOM 3 OP1 A B1038 30.624 107.622 109.296 1.00 32.91 O
ATOM 4 OP2 A B1038 32.561 106.605 110.641 1.00 29.32 O
ATOM 5 O5' A B1038 32.899 108.671 109.320 1.00 31.90 O
ATOM 6 C5' A B1038 32.575 109.992 108.843 1.00 31.13 C
ATOM 7 C4' A B1038 33.841 110.796 108.647 1.00 33.88 C
ATOM 8 O4' A B1038 34.511 110.939 109.923 1.00 33.77 O
ATOM 9 C3' A B1038 34.883 110.149 107.742 1.00 33.66 C
ATOM 10 O3' A B1038 34.624 110.537 106.397 1.00 34.39 O
ATOM 11 C2' A B1038 36.197 110.765 108.225 1.00 33.44 C
ATOM 12 O2' A B1038 36.490 111.996 107.602 1.00 34.02 O
ATOM 13 C1' A B1038 35.905 111.024 109.709 1.00 33.02 C
ATOM 14 N9 A B1038 36.573 110.167 110.681 1.00 31.64 N
ATOM 15 C8 A B1038 36.540 108.798 110.800 1.00 31.50 C
ATOM 16 N7 A B1038 37.242 108.341 111.809 1.00 31.61 N
ATOM 17 C5 A B1038 37.778 109.487 112.387 1.00 29.16 C
ATOM 18 C6 A B1038 38.610 109.684 113.494 1.00 26.62 C
ATOM 19 N6 A B1038 39.082 108.693 114.252 1.00 27.53 N
ATOM 20 N1 A B1038 38.948 110.950 113.805 1.00 26.94 N
ATOM 21 C2 A B1038 38.481 111.945 113.050 1.00 28.14 C
ATOM 22 N3 A B1038 37.695 111.889 111.985 1.00 30.53 N
ATOM 23 C4 A B1038 37.375 110.615 111.701 1.00 29.52 C
ATOM 24 P C B1039 34.281 109.436 105.286 1.00 35.11 P
ATOM 25 OP1 C B1039 34.118 110.191 104.024 1.00 31.33 O
ATOM 26 OP2 C B1039 33.186 108.541 105.762 1.00 36.00 O
ATOM 27 O5' C B1039 35.583 108.534 105.225 1.00 34.96 O
TER

Atoms:
C2: (37.901,105.444,108.670)
OP1: (34.118,110.191,104.024)
OP2: (33.186,108.541,105.762)
C4: (35.759,105.540,109.583)
O5': (35.583,108.534,105.225)
C3': (37.401,106.430,104.531)
C1': (38.467,106.691,106.596)
O4': (38.138,107.979,106.101)
C5': (36.712,108.881,104.423)
P: (34.281,109.436,105.286)
O2: (39.079,105.040,108.688)
C4': (37.811,107.892,104.685)
C2': (38.441,105.748,105.399)
O2': (39.724,105.723,104.786)
N1: (37.480,106.292,107.625)
N3: (37.014,105.087,109.631)
N4: (34.929,105.184,110.571)
C6: (36.186,106.730,107.578)
C5: (35.301,106.383,108.526)
O3': (37.408,105.838,103.227)
OP1: (30.624,107.622,109.296)
OP2: (32.561,106.605,110.641)
C3': (34.883,110.149,107.742)
C1': (35.905,111.024,109.709)
C5': (32.575,109.992,108.843)
O4': (34.511,110.939,109.923)
C8: (36.540,108.798,110.800)
O2': (36.490,111.996,107.602)
C6: (38.610,109.684,113.494)
C5: (37.778,109.487,112.387)
C4: (37.375,110.615,111.701)
P: (31.838,107.798,110.130)
C4': (33.841,110.796,108.647)
C2': (36.197,110.765,108.225)
C2: (38.481,111.945,113.050)
N1: (38.948,110.950,113.805)
N3: (37.695,111.889,111.985)
N6: (39.082,108.693,114.252)
N7: (37.242,108.341,111.809)
N9: (36.573,110.167,110.681)
O5': (32.899,108.671,109.320)
O3': (34.624,110.537,106.397)
Image (generated by PyMOL):
PyMOL image
show in jmol