Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A1039:A1038
Extra
PDB:
ATOM 1 O3' A A1038 34.866 111.293 106.738 1.00 41.24 O
ATOM 2 P C A1039 34.619 110.191 105.604 1.00 41.88 P
ATOM 3 OP1 C A1039 34.630 110.987 104.357 1.00 41.10 O
ATOM 4 OP2 C A1039 33.458 109.330 105.925 1.00 41.93 O
ATOM 5 O5' C A1039 35.935 109.309 105.613 1.00 42.32 O
ATOM 6 C5' C A1039 37.002 109.580 104.699 1.00 43.35 C
ATOM 7 C4' C A1039 38.071 108.569 104.899 1.00 45.82 C
ATOM 8 O4' C A1039 38.445 108.626 106.307 1.00 47.67 O
ATOM 9 C3' C A1039 37.576 107.142 104.747 1.00 47.80 C
ATOM 10 O3' C A1039 37.422 106.608 103.415 1.00 48.73 O
ATOM 11 C2' C A1039 38.625 106.401 105.567 1.00 49.55 C
ATOM 12 O2' C A1039 39.901 106.394 104.939 1.00 48.44 O
ATOM 13 C1' C A1039 38.721 107.316 106.787 1.00 49.09 C
ATOM 14 N1 C A1039 37.746 106.951 107.855 1.00 49.47 N
ATOM 15 C2 C A1039 38.189 106.145 108.919 1.00 50.37 C
ATOM 16 O2 C A1039 39.383 105.792 108.960 1.00 53.90 O
ATOM 17 N3 C A1039 37.308 105.771 109.876 1.00 49.09 N
ATOM 18 C4 C A1039 36.038 106.168 109.809 1.00 47.16 C
ATOM 19 N4 C A1039 35.211 105.754 110.771 1.00 45.02 N
ATOM 20 C5 C A1039 35.562 106.998 108.755 1.00 46.98 C
ATOM 21 C6 C A1039 36.439 107.364 107.809 1.00 47.69 C
ATOM 22 P A A1040 38.166 107.276 102.152 1.00 49.78 P
ATOM 23 OP1 A A1040 39.393 107.947 102.651 1.00 49.06 O
ATOM 24 OP2 A A1040 37.196 108.039 101.311 1.00 49.88 O
ATOM 25 O5' A A1040 38.618 106.007 101.298 1.00 46.11 O
TER
ATOM 1 O3' A B1037 31.718 109.454 111.736 1.00 36.41 O
ATOM 2 P A B1038 32.227 108.504 110.567 1.00 39.01 P
ATOM 3 OP1 A B1038 31.067 108.229 109.701 1.00 39.77 O
ATOM 4 OP2 A B1038 32.987 107.375 111.172 1.00 40.37 O
ATOM 5 O5' A B1038 33.252 109.402 109.756 1.00 37.84 O
ATOM 6 C5' A B1038 32.832 110.603 109.116 1.00 40.12 C
ATOM 7 C4' A B1038 34.006 111.516 108.941 1.00 39.91 C
ATOM 8 O4' A B1038 34.612 111.693 110.233 1.00 39.85 O
ATOM 9 C3' A B1038 35.103 110.910 108.084 1.00 40.47 C
ATOM 10 O3' A B1038 34.866 111.293 106.738 1.00 41.24 O
ATOM 11 C2' A B1038 36.346 111.617 108.592 1.00 41.05 C
ATOM 12 O2' A B1038 36.490 112.896 108.027 1.00 39.44 O
ATOM 13 C1' A B1038 36.008 111.796 110.072 1.00 41.93 C
ATOM 14 N9 A B1038 36.678 110.874 110.986 1.00 42.18 N
ATOM 15 C8 A B1038 36.697 109.503 111.031 1.00 42.52 C
ATOM 16 N7 A B1038 37.439 109.022 111.992 1.00 43.13 N
ATOM 17 C5 A B1038 37.930 110.154 112.627 1.00 43.02 C
ATOM 18 C6 A B1038 38.771 110.330 113.738 1.00 42.41 C
ATOM 19 N6 A B1038 39.278 109.318 114.446 1.00 42.73 N
ATOM 20 N1 A B1038 39.070 111.593 114.105 1.00 41.64 N
ATOM 21 C2 A B1038 38.546 112.598 113.401 1.00 42.69 C
ATOM 22 N3 A B1038 37.739 112.559 112.353 1.00 42.24 N
ATOM 23 C4 A B1038 37.469 111.294 112.015 1.00 42.26 C
ATOM 24 P C B1039 34.619 110.191 105.604 1.00 41.88 P
ATOM 25 OP1 C B1039 34.630 110.987 104.357 1.00 41.10 O
ATOM 26 OP2 C B1039 33.458 109.330 105.925 1.00 41.93 O
ATOM 27 O5' C B1039 35.935 109.309 105.613 1.00 42.32 O
TER
ATOM 2 P C A1039 34.619 110.191 105.604 1.00 41.88 P
ATOM 3 OP1 C A1039 34.630 110.987 104.357 1.00 41.10 O
ATOM 4 OP2 C A1039 33.458 109.330 105.925 1.00 41.93 O
ATOM 5 O5' C A1039 35.935 109.309 105.613 1.00 42.32 O
ATOM 6 C5' C A1039 37.002 109.580 104.699 1.00 43.35 C
ATOM 7 C4' C A1039 38.071 108.569 104.899 1.00 45.82 C
ATOM 8 O4' C A1039 38.445 108.626 106.307 1.00 47.67 O
ATOM 9 C3' C A1039 37.576 107.142 104.747 1.00 47.80 C
ATOM 10 O3' C A1039 37.422 106.608 103.415 1.00 48.73 O
ATOM 11 C2' C A1039 38.625 106.401 105.567 1.00 49.55 C
ATOM 12 O2' C A1039 39.901 106.394 104.939 1.00 48.44 O
ATOM 13 C1' C A1039 38.721 107.316 106.787 1.00 49.09 C
ATOM 14 N1 C A1039 37.746 106.951 107.855 1.00 49.47 N
ATOM 15 C2 C A1039 38.189 106.145 108.919 1.00 50.37 C
ATOM 16 O2 C A1039 39.383 105.792 108.960 1.00 53.90 O
ATOM 17 N3 C A1039 37.308 105.771 109.876 1.00 49.09 N
ATOM 18 C4 C A1039 36.038 106.168 109.809 1.00 47.16 C
ATOM 19 N4 C A1039 35.211 105.754 110.771 1.00 45.02 N
ATOM 20 C5 C A1039 35.562 106.998 108.755 1.00 46.98 C
ATOM 21 C6 C A1039 36.439 107.364 107.809 1.00 47.69 C
ATOM 22 P A A1040 38.166 107.276 102.152 1.00 49.78 P
ATOM 23 OP1 A A1040 39.393 107.947 102.651 1.00 49.06 O
ATOM 24 OP2 A A1040 37.196 108.039 101.311 1.00 49.88 O
ATOM 25 O5' A A1040 38.618 106.007 101.298 1.00 46.11 O
TER
ATOM 1 O3' A B1037 31.718 109.454 111.736 1.00 36.41 O
ATOM 2 P A B1038 32.227 108.504 110.567 1.00 39.01 P
ATOM 3 OP1 A B1038 31.067 108.229 109.701 1.00 39.77 O
ATOM 4 OP2 A B1038 32.987 107.375 111.172 1.00 40.37 O
ATOM 5 O5' A B1038 33.252 109.402 109.756 1.00 37.84 O
ATOM 6 C5' A B1038 32.832 110.603 109.116 1.00 40.12 C
ATOM 7 C4' A B1038 34.006 111.516 108.941 1.00 39.91 C
ATOM 8 O4' A B1038 34.612 111.693 110.233 1.00 39.85 O
ATOM 9 C3' A B1038 35.103 110.910 108.084 1.00 40.47 C
ATOM 10 O3' A B1038 34.866 111.293 106.738 1.00 41.24 O
ATOM 11 C2' A B1038 36.346 111.617 108.592 1.00 41.05 C
ATOM 12 O2' A B1038 36.490 112.896 108.027 1.00 39.44 O
ATOM 13 C1' A B1038 36.008 111.796 110.072 1.00 41.93 C
ATOM 14 N9 A B1038 36.678 110.874 110.986 1.00 42.18 N
ATOM 15 C8 A B1038 36.697 109.503 111.031 1.00 42.52 C
ATOM 16 N7 A B1038 37.439 109.022 111.992 1.00 43.13 N
ATOM 17 C5 A B1038 37.930 110.154 112.627 1.00 43.02 C
ATOM 18 C6 A B1038 38.771 110.330 113.738 1.00 42.41 C
ATOM 19 N6 A B1038 39.278 109.318 114.446 1.00 42.73 N
ATOM 20 N1 A B1038 39.070 111.593 114.105 1.00 41.64 N
ATOM 21 C2 A B1038 38.546 112.598 113.401 1.00 42.69 C
ATOM 22 N3 A B1038 37.739 112.559 112.353 1.00 42.24 N
ATOM 23 C4 A B1038 37.469 111.294 112.015 1.00 42.26 C
ATOM 24 P C B1039 34.619 110.191 105.604 1.00 41.88 P
ATOM 25 OP1 C B1039 34.630 110.987 104.357 1.00 41.10 O
ATOM 26 OP2 C B1039 33.458 109.330 105.925 1.00 41.93 O
ATOM 27 O5' C B1039 35.935 109.309 105.613 1.00 42.32 O
TER
Atoms:
C2: (38.189,106.145,108.919)
OP1: (34.630,110.987,104.357)
OP2: (33.458,109.330,105.925)
C4: (36.038,106.168,109.809)
O5': (35.935,109.309,105.613)
C3': (37.576,107.142,104.747)
C1': (38.721,107.316,106.787)
O4': (38.445,108.626,106.307)
C5': (37.002,109.580,104.699)
P: (34.619,110.191,105.604)
O2: (39.383,105.792,108.960)
C4': (38.071,108.569,104.899)
C2': (38.625,106.401,105.567)
O2': (39.901,106.394,104.939)
N1: (37.746,106.951,107.855)
N3: (37.308,105.771,109.876)
N4: (35.211,105.754,110.771)
C6: (36.439,107.364,107.809)
C5: (35.562,106.998,108.755)
O3': (37.422,106.608,103.415)
OP1: (34.630,110.987,104.357)
OP2: (33.458,109.330,105.925)
C4: (36.038,106.168,109.809)
O5': (35.935,109.309,105.613)
C3': (37.576,107.142,104.747)
C1': (38.721,107.316,106.787)
O4': (38.445,108.626,106.307)
C5': (37.002,109.580,104.699)
P: (34.619,110.191,105.604)
O2: (39.383,105.792,108.960)
C4': (38.071,108.569,104.899)
C2': (38.625,106.401,105.567)
O2': (39.901,106.394,104.939)
N1: (37.746,106.951,107.855)
N3: (37.308,105.771,109.876)
N4: (35.211,105.754,110.771)
C6: (36.439,107.364,107.809)
C5: (35.562,106.998,108.755)
O3': (37.422,106.608,103.415)
OP1: (31.067,108.229,109.701)
OP2: (32.987,107.375,111.172)
C3': (35.103,110.910,108.084)
C1': (36.008,111.796,110.072)
C5': (32.832,110.603,109.116)
O4': (34.612,111.693,110.233)
C8: (36.697,109.503,111.031)
O2': (36.490,112.896,108.027)
C6: (38.771,110.330,113.738)
C5: (37.930,110.154,112.627)
C4: (37.469,111.294,112.015)
P: (32.227,108.504,110.567)
C4': (34.006,111.516,108.941)
C2': (36.346,111.617,108.592)
C2: (38.546,112.598,113.401)
N1: (39.070,111.593,114.105)
N3: (37.739,112.559,112.353)
N6: (39.278,109.318,114.446)
N7: (37.439,109.022,111.992)
N9: (36.678,110.874,110.986)
O5': (33.252,109.402,109.756)
O3': (34.866,111.293,106.738)
OP2: (32.987,107.375,111.172)
C3': (35.103,110.910,108.084)
C1': (36.008,111.796,110.072)
C5': (32.832,110.603,109.116)
O4': (34.612,111.693,110.233)
C8: (36.697,109.503,111.031)
O2': (36.490,112.896,108.027)
C6: (38.771,110.330,113.738)
C5: (37.930,110.154,112.627)
C4: (37.469,111.294,112.015)
P: (32.227,108.504,110.567)
C4': (34.006,111.516,108.941)
C2': (36.346,111.617,108.592)
C2: (38.546,112.598,113.401)
N1: (39.070,111.593,114.105)
N3: (37.739,112.559,112.353)
N6: (39.278,109.318,114.446)
N7: (37.439,109.022,111.992)
N9: (36.678,110.874,110.986)
O5': (33.252,109.402,109.756)
O3': (34.866,111.293,106.738)
Image (generated by PyMOL):