Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:01039:01038
Extra
PDB:
ATOM 1 O3' A A1038 34.498 110.639 106.184 1.00 28.93 O
ATOM 2 P C A1039 34.209 109.549 105.046 1.00 32.79 P
ATOM 3 OP1 C A1039 34.061 110.293 103.765 1.00 30.48 O
ATOM 4 OP2 C A1039 33.128 108.629 105.496 1.00 34.21 O
ATOM 5 O5' C A1039 35.536 108.686 105.009 1.00 34.75 O
ATOM 6 C5' C A1039 36.679 109.080 104.246 1.00 35.76 C
ATOM 7 C4' C A1039 37.758 108.053 104.433 1.00 39.61 C
ATOM 8 O4' C A1039 38.173 108.091 105.827 1.00 40.57 O
ATOM 9 C3' C A1039 37.279 106.614 104.261 1.00 43.51 C
ATOM 10 O3' C A1039 37.184 106.079 102.934 1.00 45.78 O
ATOM 11 C2' C A1039 38.330 105.862 105.056 1.00 45.09 C
ATOM 12 O2' C A1039 39.568 105.786 104.367 1.00 49.43 O
ATOM 13 C1' C A1039 38.477 106.775 106.271 1.00 43.26 C
ATOM 14 N1 C A1039 37.535 106.389 107.345 1.00 42.42 N
ATOM 15 C2 C A1039 37.985 105.515 108.363 1.00 43.33 C
ATOM 16 O2 C A1039 39.157 105.101 108.334 1.00 45.55 O
ATOM 17 N3 C A1039 37.130 105.150 109.349 1.00 41.81 N
ATOM 18 C4 C A1039 35.880 105.620 109.354 1.00 41.65 C
ATOM 19 N4 C A1039 35.079 105.251 110.357 1.00 40.08 N
ATOM 20 C5 C A1039 35.396 106.498 108.332 1.00 41.26 C
ATOM 21 C6 C A1039 36.248 106.854 107.360 1.00 39.85 C
ATOM 22 P A A1040 37.995 106.739 101.715 1.00 45.89 P
ATOM 23 OP1 A A1040 39.227 107.383 102.226 1.00 47.17 O
ATOM 24 OP2 A A1040 37.044 107.519 100.885 1.00 46.74 O
ATOM 25 O5' A A1040 38.465 105.470 100.884 1.00 39.40 O
TER
ATOM 1 O3' A B1037 31.288 108.863 111.183 1.00 30.10 O
ATOM 2 P A B1038 31.721 107.864 110.001 1.00 30.50 P
ATOM 3 OP1 A B1038 30.510 107.621 109.179 1.00 30.83 O
ATOM 4 OP2 A B1038 32.449 106.712 110.582 1.00 28.73 O
ATOM 5 O5' A B1038 32.772 108.706 109.143 1.00 28.30 O
ATOM 6 C5' A B1038 32.434 110.005 108.611 1.00 26.29 C
ATOM 7 C4' A B1038 33.684 110.836 108.439 1.00 28.42 C
ATOM 8 O4' A B1038 34.339 110.960 109.725 1.00 28.70 O
ATOM 9 C3' A B1038 34.744 110.227 107.528 1.00 28.96 C
ATOM 10 O3' A B1038 34.498 110.639 106.184 1.00 28.93 O
ATOM 11 C2' A B1038 36.047 110.843 108.043 1.00 26.69 C
ATOM 12 O2' A B1038 36.329 112.088 107.436 1.00 28.98 O
ATOM 13 C1' A B1038 35.736 111.063 109.530 1.00 27.35 C
ATOM 14 N9 A B1038 36.409 110.209 110.509 1.00 27.40 N
ATOM 15 C8 A B1038 36.359 108.841 110.651 1.00 26.93 C
ATOM 16 N7 A B1038 37.073 108.389 111.654 1.00 26.15 N
ATOM 17 C5 A B1038 37.636 109.534 112.205 1.00 26.32 C
ATOM 18 C6 A B1038 38.503 109.735 113.288 1.00 25.09 C
ATOM 19 N6 A B1038 39.008 108.745 114.034 1.00 23.63 N
ATOM 20 N1 A B1038 38.850 111.003 113.582 1.00 26.06 N
ATOM 21 C2 A B1038 38.378 111.991 112.827 1.00 25.06 C
ATOM 22 N3 A B1038 37.576 111.930 111.773 1.00 27.90 N
ATOM 23 C4 A B1038 37.234 110.658 111.512 1.00 26.01 C
ATOM 24 P C B1039 34.209 109.549 105.046 1.00 32.79 P
ATOM 25 OP1 C B1039 34.061 110.293 103.765 1.00 30.48 O
ATOM 26 OP2 C B1039 33.128 108.629 105.496 1.00 34.21 O
ATOM 27 O5' C B1039 35.536 108.686 105.009 1.00 34.75 O
TER
ATOM 2 P C A1039 34.209 109.549 105.046 1.00 32.79 P
ATOM 3 OP1 C A1039 34.061 110.293 103.765 1.00 30.48 O
ATOM 4 OP2 C A1039 33.128 108.629 105.496 1.00 34.21 O
ATOM 5 O5' C A1039 35.536 108.686 105.009 1.00 34.75 O
ATOM 6 C5' C A1039 36.679 109.080 104.246 1.00 35.76 C
ATOM 7 C4' C A1039 37.758 108.053 104.433 1.00 39.61 C
ATOM 8 O4' C A1039 38.173 108.091 105.827 1.00 40.57 O
ATOM 9 C3' C A1039 37.279 106.614 104.261 1.00 43.51 C
ATOM 10 O3' C A1039 37.184 106.079 102.934 1.00 45.78 O
ATOM 11 C2' C A1039 38.330 105.862 105.056 1.00 45.09 C
ATOM 12 O2' C A1039 39.568 105.786 104.367 1.00 49.43 O
ATOM 13 C1' C A1039 38.477 106.775 106.271 1.00 43.26 C
ATOM 14 N1 C A1039 37.535 106.389 107.345 1.00 42.42 N
ATOM 15 C2 C A1039 37.985 105.515 108.363 1.00 43.33 C
ATOM 16 O2 C A1039 39.157 105.101 108.334 1.00 45.55 O
ATOM 17 N3 C A1039 37.130 105.150 109.349 1.00 41.81 N
ATOM 18 C4 C A1039 35.880 105.620 109.354 1.00 41.65 C
ATOM 19 N4 C A1039 35.079 105.251 110.357 1.00 40.08 N
ATOM 20 C5 C A1039 35.396 106.498 108.332 1.00 41.26 C
ATOM 21 C6 C A1039 36.248 106.854 107.360 1.00 39.85 C
ATOM 22 P A A1040 37.995 106.739 101.715 1.00 45.89 P
ATOM 23 OP1 A A1040 39.227 107.383 102.226 1.00 47.17 O
ATOM 24 OP2 A A1040 37.044 107.519 100.885 1.00 46.74 O
ATOM 25 O5' A A1040 38.465 105.470 100.884 1.00 39.40 O
TER
ATOM 1 O3' A B1037 31.288 108.863 111.183 1.00 30.10 O
ATOM 2 P A B1038 31.721 107.864 110.001 1.00 30.50 P
ATOM 3 OP1 A B1038 30.510 107.621 109.179 1.00 30.83 O
ATOM 4 OP2 A B1038 32.449 106.712 110.582 1.00 28.73 O
ATOM 5 O5' A B1038 32.772 108.706 109.143 1.00 28.30 O
ATOM 6 C5' A B1038 32.434 110.005 108.611 1.00 26.29 C
ATOM 7 C4' A B1038 33.684 110.836 108.439 1.00 28.42 C
ATOM 8 O4' A B1038 34.339 110.960 109.725 1.00 28.70 O
ATOM 9 C3' A B1038 34.744 110.227 107.528 1.00 28.96 C
ATOM 10 O3' A B1038 34.498 110.639 106.184 1.00 28.93 O
ATOM 11 C2' A B1038 36.047 110.843 108.043 1.00 26.69 C
ATOM 12 O2' A B1038 36.329 112.088 107.436 1.00 28.98 O
ATOM 13 C1' A B1038 35.736 111.063 109.530 1.00 27.35 C
ATOM 14 N9 A B1038 36.409 110.209 110.509 1.00 27.40 N
ATOM 15 C8 A B1038 36.359 108.841 110.651 1.00 26.93 C
ATOM 16 N7 A B1038 37.073 108.389 111.654 1.00 26.15 N
ATOM 17 C5 A B1038 37.636 109.534 112.205 1.00 26.32 C
ATOM 18 C6 A B1038 38.503 109.735 113.288 1.00 25.09 C
ATOM 19 N6 A B1038 39.008 108.745 114.034 1.00 23.63 N
ATOM 20 N1 A B1038 38.850 111.003 113.582 1.00 26.06 N
ATOM 21 C2 A B1038 38.378 111.991 112.827 1.00 25.06 C
ATOM 22 N3 A B1038 37.576 111.930 111.773 1.00 27.90 N
ATOM 23 C4 A B1038 37.234 110.658 111.512 1.00 26.01 C
ATOM 24 P C B1039 34.209 109.549 105.046 1.00 32.79 P
ATOM 25 OP1 C B1039 34.061 110.293 103.765 1.00 30.48 O
ATOM 26 OP2 C B1039 33.128 108.629 105.496 1.00 34.21 O
ATOM 27 O5' C B1039 35.536 108.686 105.009 1.00 34.75 O
TER
Atoms:
C2: (37.985,105.515,108.363)
OP1: (34.061,110.293,103.765)
OP2: (33.128,108.629,105.496)
C4: (35.880,105.620,109.354)
O5': (35.536,108.686,105.009)
C3': (37.279,106.614,104.261)
C1': (38.477,106.775,106.271)
O4': (38.173,108.091,105.827)
C5': (36.679,109.080,104.246)
P: (34.209,109.549,105.046)
O2: (39.157,105.101,108.334)
C4': (37.758,108.053,104.433)
C2': (38.330,105.862,105.056)
O2': (39.568,105.786,104.367)
N1: (37.535,106.389,107.345)
N3: (37.130,105.150,109.349)
N4: (35.079,105.251,110.357)
C6: (36.248,106.854,107.360)
C5: (35.396,106.498,108.332)
O3': (37.184,106.079,102.934)
OP1: (34.061,110.293,103.765)
OP2: (33.128,108.629,105.496)
C4: (35.880,105.620,109.354)
O5': (35.536,108.686,105.009)
C3': (37.279,106.614,104.261)
C1': (38.477,106.775,106.271)
O4': (38.173,108.091,105.827)
C5': (36.679,109.080,104.246)
P: (34.209,109.549,105.046)
O2: (39.157,105.101,108.334)
C4': (37.758,108.053,104.433)
C2': (38.330,105.862,105.056)
O2': (39.568,105.786,104.367)
N1: (37.535,106.389,107.345)
N3: (37.130,105.150,109.349)
N4: (35.079,105.251,110.357)
C6: (36.248,106.854,107.360)
C5: (35.396,106.498,108.332)
O3': (37.184,106.079,102.934)
OP1: (30.510,107.621,109.179)
OP2: (32.449,106.712,110.582)
C3': (34.744,110.227,107.528)
C1': (35.736,111.063,109.530)
C5': (32.434,110.005,108.611)
O4': (34.339,110.960,109.725)
C8: (36.359,108.841,110.651)
O2': (36.329,112.088,107.436)
C6: (38.503,109.735,113.288)
C5: (37.636,109.534,112.205)
C4: (37.234,110.658,111.512)
P: (31.721,107.864,110.001)
C4': (33.684,110.836,108.439)
C2': (36.047,110.843,108.043)
C2: (38.378,111.991,112.827)
N1: (38.850,111.003,113.582)
N3: (37.576,111.930,111.773)
N6: (39.008,108.745,114.034)
N7: (37.073,108.389,111.654)
N9: (36.409,110.209,110.509)
O5': (32.772,108.706,109.143)
O3': (34.498,110.639,106.184)
OP2: (32.449,106.712,110.582)
C3': (34.744,110.227,107.528)
C1': (35.736,111.063,109.530)
C5': (32.434,110.005,108.611)
O4': (34.339,110.960,109.725)
C8: (36.359,108.841,110.651)
O2': (36.329,112.088,107.436)
C6: (38.503,109.735,113.288)
C5: (37.636,109.534,112.205)
C4: (37.234,110.658,111.512)
P: (31.721,107.864,110.001)
C4': (33.684,110.836,108.439)
C2': (36.047,110.843,108.043)
C2: (38.378,111.991,112.827)
N1: (38.850,111.003,113.582)
N3: (37.576,111.930,111.773)
N6: (39.008,108.745,114.034)
N7: (37.073,108.389,111.654)
N9: (36.409,110.209,110.509)
O5': (32.772,108.706,109.143)
O3': (34.498,110.639,106.184)
Image (generated by PyMOL):