ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2A43:A6:A5

Extra

PDB:
ATOM 1 O3' A A 5 1.729 49.611 25.205 1.00 24.10 O
ATOM 2 P C A 6 1.164 48.242 25.759 1.00 22.25 P
ATOM 3 OP1 C A 6 2.301 47.276 25.613 1.00 26.37 O
ATOM 4 OP2 C A 6 -0.160 47.995 25.117 1.00 22.58 O
ATOM 5 O5' C A 6 0.854 48.472 27.308 1.00 20.06 O
ATOM 6 C5' C A 6 1.885 48.522 28.287 1.00 22.64 C
ATOM 7 C4' C A 6 1.256 48.692 29.643 1.00 22.16 C
ATOM 8 O4' C A 6 0.803 50.067 29.771 1.00 22.53 O
ATOM 9 C3' C A 6 0.012 47.873 29.958 1.00 19.02 C
ATOM 10 O3' C A 6 0.415 46.571 30.367 1.00 19.44 O
ATOM 11 C2' C A 6 -0.624 48.673 31.095 1.00 18.98 C
ATOM 12 O2' C A 6 0.086 48.552 32.310 1.00 23.07 O
ATOM 13 C1' C A 6 -0.392 50.060 30.556 1.00 21.22 C
ATOM 14 N1 C A 6 -1.456 50.554 29.669 1.00 20.09 N
ATOM 15 C2 C A 6 -2.652 50.995 30.248 1.00 19.23 C
ATOM 16 O2 C A 6 -2.733 50.932 31.470 1.00 19.50 O
ATOM 17 N3 C A 6 -3.669 51.455 29.489 1.00 19.61 N
ATOM 18 C4 C A 6 -3.445 51.490 28.174 1.00 19.29 C
ATOM 19 N4 C A 6 -4.391 52.006 27.388 1.00 21.56 N
ATOM 20 C5 C A 6 -2.249 51.024 27.569 1.00 20.25 C
ATOM 21 C6 C A 6 -1.320 50.463 28.332 1.00 19.73 C
ATOM 22 P C A 7 -0.560 45.339 30.032 1.00 17.99 P
ATOM 23 OP1 C A 7 0.194 44.148 30.414 1.00 21.19 O
ATOM 24 OP2 C A 7 -1.190 45.505 28.686 1.00 17.77 O
ATOM 25 O5' C A 7 -1.762 45.589 31.058 1.00 17.74 O
TER

ATOM 1 O3' C B 4 -3.124 50.826 22.183 1.00 19.72 O
ATOM 2 P A B 5 -2.845 51.749 23.482 1.00 21.23 P
ATOM 3 OP1 A B 5 -3.874 51.466 24.506 1.00 20.04 O
ATOM 4 OP2 A B 5 -2.669 53.120 22.968 1.00 24.09 O
ATOM 5 O5' A B 5 -1.477 51.179 24.080 1.00 21.50 O
ATOM 6 C5' A B 5 -0.286 51.316 23.278 1.00 23.87 C
ATOM 7 C4' A B 5 0.908 51.580 24.157 1.00 24.29 C
ATOM 8 O4' A B 5 0.925 52.959 24.568 1.00 26.92 O
ATOM 9 C3' A B 5 1.015 50.791 25.441 1.00 23.90 C
ATOM 10 O3' A B 5 1.729 49.611 25.205 1.00 24.10 O
ATOM 11 C2' A B 5 1.875 51.677 26.348 1.00 22.77 C
ATOM 12 O2' A B 5 3.247 51.713 25.970 1.00 29.78 O
ATOM 13 C1' A B 5 1.245 52.997 25.942 1.00 23.81 C
ATOM 14 N9 A B 5 0.097 53.477 26.675 1.00 21.84 N
ATOM 15 C8 A B 5 -1.068 53.979 26.123 1.00 21.64 C
ATOM 16 N7 A B 5 -1.923 54.374 27.025 1.00 21.73 N
ATOM 17 C5 A B 5 -1.292 54.148 28.241 1.00 19.86 C
ATOM 18 C6 A B 5 -1.711 54.364 29.565 1.00 18.05 C
ATOM 19 N6 A B 5 -2.878 54.891 29.885 1.00 22.08 N
ATOM 20 N1 A B 5 -0.857 54.036 30.543 1.00 19.94 N
ATOM 21 C2 A B 5 0.334 53.517 30.151 1.00 21.58 C
ATOM 22 N3 A B 5 0.854 53.239 28.956 1.00 20.10 N
ATOM 23 C4 A B 5 -0.045 53.615 28.039 1.00 18.96 C
ATOM 24 P C B 6 1.164 48.242 25.759 1.00 22.25 P
ATOM 25 OP1 C B 6 2.301 47.276 25.613 1.00 26.37 O
ATOM 26 OP2 C B 6 -0.160 47.995 25.117 1.00 22.58 O
ATOM 27 O5' C B 6 0.854 48.472 27.308 1.00 20.06 O
TER

Atoms:
C2: (-2.652,50.995,30.248)
OP1: (2.301,47.276,25.613)
OP2: (-0.160,47.995,25.117)
C4: (-3.445,51.490,28.174)
O5': (0.854,48.472,27.308)
C3': (0.012,47.873,29.958)
C1': (-0.392,50.060,30.556)
O4': (0.803,50.067,29.771)
C5': (1.885,48.522,28.287)
P: (1.164,48.242,25.759)
O2: (-2.733,50.932,31.470)
C4': (1.256,48.692,29.643)
C2': (-0.624,48.673,31.095)
O2': (0.086,48.552,32.310)
N1: (-1.456,50.554,29.669)
N3: (-3.669,51.455,29.489)
N4: (-4.391,52.006,27.388)
C6: (-1.320,50.463,28.332)
C5: (-2.249,51.024,27.569)
O3': (0.415,46.571,30.367)
OP1: (-3.874,51.466,24.506)
OP2: (-2.669,53.120,22.968)
C3': (1.015,50.791,25.441)
C1': (1.245,52.997,25.942)
C5': (-0.286,51.316,23.278)
O4': (0.925,52.959,24.568)
C8: (-1.068,53.979,26.123)
O2': (3.247,51.713,25.970)
C6: (-1.711,54.364,29.565)
C5: (-1.292,54.148,28.241)
C4: (-0.045,53.615,28.039)
P: (-2.845,51.749,23.482)
C4': (0.908,51.580,24.157)
C2': (1.875,51.677,26.348)
C2: (0.334,53.517,30.151)
N1: (-0.857,54.036,30.543)
N3: (0.854,53.239,28.956)
N6: (-2.878,54.891,29.885)
N7: (-1.923,54.374,27.025)
N9: (0.097,53.477,26.675)
O5': (-1.477,51.179,24.080)
O3': (1.729,49.611,25.205)
Image (generated by PyMOL):
PyMOL image
show in jmol